Bufo bufo (common toad): 120977082
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Entry
120977082 CDS
T07950
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
120977082 (SNAPC4)
03021 Transcription machinery [BR:
bbuf03021
]
120977082 (SNAPC4)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120977082 (SNAPC4)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
120977082 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
EAD9
Motif
Other DBs
NCBI-GeneID:
120977082
NCBI-ProteinID:
XP_040260779
LinkDB
All DBs
Position
8:complement(17894360..17953061)
Genome browser
AA seq
1604 aa
AA seq
DB search
MSIRDFDAARDKIQREIEALERSLGPDFSTIDVVLSGGSDESDDDDSDSGDTLDEDLEAD
EINLEDGGHRAEMCLQMNLVYQAVLQEKLQELELLIAQNKVQQEELLWELAGRRTQQVGS
AKPYPANLSIGHFFKPYFKDKSSGVGPPANPEMIERSSHTLKSFKELSSRKWRTVDNEEL
SKAIVSDGLQRMLQPKLLKLEYLQQKWDNARNDVDKSIIAKQIQEVERDIDDINQLPEEA
LLGQRTDDHDWEKISNVYFEGIHNADRISKIWKNHLHPHVNKEPWKEDEIKKLQEVAKEH
NCVNWELIAEKLGTQRTAFQCLQQFQLSNKDFRRKEFTKEEDEMLIYFVQRMRVGMHIPY
RKISYFMEGRDSMQLLNRWSKCLDPCLKKGLWSKEEDALLLKAVEKYGEKDWYKIRLEVP
GRSDIQCRERYYKGLHKDVKKGKWTPEEEQKLVELTKKYGVGHWAKVGREITHRTGSQCL
SKWKNMNGFFKGKTRKRKMPQKRSQNTAPQKRPRKAAPRKRPQNKAPKKIKEEELSEEDV
SDISSESSSSSFIISSSSTSSIHSSSSSSNNSSSSSSSSSSEDEDDNEERRATRQFLDSV
PELDLWIPRKKSPDLASIKKTMTSSTSSSCRVPRTRLRGRQDNYQFNTILKGIAYPPSTD
TVTENPGDILLQAKNSGHDIVQLSEYDVRRILRWNTILCQEKQVLQLSQTQKEPEGDNAE
KLGPRFASMRRKTPVDRSLLATVTPWVGNVFLPLLTLYKTPWDKQILADVMRTKLSSVTI
ASTPIFTLLIQFFQINAAGCLEMISLRKAQQVEFLKRMRQKSQQKTRANTRPSKSISANS
SSAQQPPPARSGEAEPLTKCQSSQRQVRSSAVASKPKTVFELLKEKRLQESRARRRAVIT
PRILISPQIVLTQACVPAGQHQPPVHLATSPASPNLPAFPVIQLNDVSRNQILSASSDSA
NRQGADADKAVAGTHNSAPSTRSPRAVQAVPGGQVISSQQIPMQLLQSPAAATTSPRIVL
TQACAPAGQHPSPVHPATLTTSQSLPVYPVIQTNNISSNHVSSASSDSISRQGADAGKAM
GVMQDAEATNRHNSAPSTGSPCAVQAVPGGQIVASQQMPLQLLQSPAAATTSPRIVLTQA
CAPAGQHPSPVHPATLTASQNLSAMPLPMCSVRQTNDISSNQISSVSSDSVNRQGADADQ
AKAGTQDAEARNQCNSAPSIGSPCAVQAVPGPQVIASQQVPIQLLQSSAATTFILTPQGL
VQIPIQALFSAPSQVLMNQNSTFSESSSMKAREPSINGESSDKIPEAPTNLSNTASQPLP
SNGSSTENTAREAAQLQCPAPDVSAKMPRILPTFSPSNKSTKFTLSPKMYPVVKVAKILT
SNQPNAFTGNVVSSQSPAPSQITINNPEKKIFDLGLISLEDETSVKDWLQGKSCTAYLPP
SACTLKTFSRILLQKKTLEKSAFKLIPRSDGGGGDEDVSRKQEILDNLVEQKLKDNPAYS
LLKRRFLSAFTFSGVLAVFAPPKNEAPTFGVKSDVKDEDKVMEMDMYECYACNNTDDRMV
GESPGPTAQSCPQEGETSNPDGQRTPVNTRRRPQRRRVYRRSET
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagggactttgatgcagcgagggacaagattcagagagaaatcgaggcgctc
gagagaagtttgggtccggacttctcaacgatagatgtggtcctgtctggcggcagtgac
gagtccgatgacgatgattctgatagcggagacacattggatgaagacctcgaagctgat
gaaattaatctggaggatggaggtcacagagcagagatgtgtttgcagatgaacctggtc
tatcaggcagtgttacaagagaagcttcaggaattggaacttcttatcgctcagaataaa
gtgcagcaggaagaactgctctgggagctcgctggacggagaacacaacaggtcgggagc
gcaaaaccctacccggcaaatctgtccattggccatttctttaaaccgtattttaaagat
aaatcctctggagtggggcctccagccaatccggagatgatagagcgatcttctcatacg
ctgaaaagctttaaagaattatccagtagaaaatggaggactgtagacaatgaagagtta
agtaaggcaattgtgagtgacggcttacaaagaatgcttcaacccaaattactcaagttg
gaatatctgcagcagaagtgggataatgccagaaatgatgttgacaaaagcattattgcg
aagcagatccaagaggtagagcgggacatagatgatatcaaccaacttccagaggaagct
cttttggggcaaagaaccgacgatcatgactgggagaagatttctaatgtctattttgaa
ggcattcacaatgcggataggattagtaagatttggaagaaccatctgcaccctcatgtc
aacaaggagccctggaaagaagatgaaattaaaaaattgcaagaagttgcgaaagaacac
aactgtgtcaactgggaactaatagccgagaagctggggacacagagaacggccttccag
tgcctccagcaattccagctcagcaacaaagattttaggaggaaagagttcaccaaggaa
gaagatgagatgctgatctattttgtccagcgaatgagggtggggatgcacataccttac
cgcaagatttcctatttcatggaaggcagagactcaatgcagctgcttaatcgatggtcg
aaatgtcttgatccgtgtctgaagaagggactctggagcaaagaagaagatgcgctgtta
ttaaaagctgtggagaaatatggagaaaaggattggtacaaaatccgattggaagttcct
ggaaggagtgatatccagtgtcgtgaaaggtattataagggacttcacaaggacgtgaaa
aagggcaaatggaccccggaagaagaacaaaagctagtggagttgactaagaagtatgga
gtaggtcattgggctaaagttggcagagaaataacacatcggacaggatcccagtgcctg
agcaaatggaagaatatgaacggttttttcaaggggaaaactagaaaacgaaaaatgcca
caaaaaaggtcgcaaaatacagcaccgcagaaaaggccacgaaaggcagcaccacgaaag
agaccacaaaacaaggcgcctaagaagataaaagaagaggaactgagtgaagaagacgtc
agtgatattagcagcgaaagtagcagcagcagcttcatcatcagtagtagcagcaccagt
agtattcatagcagcagcagcagtagtaataatagtagcagcagtagtagtagtagtagc
agcgaagatgaggatgacaatgaggagagaagagcgactaggcaatttctagactctgtg
cctgagttagatttatggatccccaggaaaaagagcccagacttggcctccataaagaag
actatgacttcttcaacttctagcagttgtagagtaccacgtactagacttcggggaaga
caagacaattaccagttcaacactatactgaaaggtattgcttacccaccgtctacagac
acagtaacggaaaatcccggggacatcctcttacaggctaagaacagtggccatgatata
gtgcagctcagtgaatatgacgtccgtaggattctccgatggaataccatactctgccaa
gaaaaacaggtcctacagctcagtcaaacccagaaggagcctgagggtgacaacgcagag
aaattgggtccaaggtttgcatcgatgagaaggaaaacccctgtggacagaagtctgctg
gctacggttacgccctgggtgggcaatgtctttcttccgttactgactctctacaagact
ccttgggataagcaaattcttgctgatgtgatgagaacgaagctttcttctgtgactata
gccagcaccccaattttcactctgcttatccagttctttcagatcaatgcggcaggttgt
ctagaaatgatcagtctaaggaaagcccaacaagttgagtttctaaaacgtatgagacag
aaatcacagcagaagactcgagcgaatacgaggccttcaaaaagcatttccgcaaactcc
tccagtgctcagcaaccaccgccggccagatcgggggaagccgaaccactaacaaaatgt
cagtcttctcagcgccaagtaaggagttctgcagtagcgtcaaaaccgaagacggtcttt
gagttgctgaaagaaaaaagactgcaggaatcgagagcccgtcgtagagctgtcattact
ccgaggattctcatctctcctcagatagtgctcacccaggcctgtgtccctgctggacag
catcaacccccagtgcatcttgcgacttcacccgcttcaccaaacttgccagcgttcccg
gttatacagctgaacgatgtttctagaaaccagatattatcagcaagcagtgattctgca
aaccgacaaggagccgatgcagataaagctgtggccggtactcacaatagtgcgccatct
actcgctctccacgcgctgtgcaagccgtgccaggtggtcaagtcatatcttcacagcaa
attccaatgcagctgcttcagagccctgcagccgccactacctctcctcgaattgtgctc
acccaggcctgcgcccctgccggacagcatccatccccagtgcatcctgccactttaacc
acttcacaaagcttgccagtgtacccggttatacaaacgaacaatatttctagcaaccac
gtgtcatcggcaagcagcgattccataagccggcaaggagcagatgcaggtaaagctatg
ggcgttatgcaagatgcggaagcaacaaatcgccacaatagtgcgccatctactggctct
ccatgtgctgtgcaagccgtgccaggtggtcaaatcgtagcttcacagcaaatgccacta
cagctgctccagagccctgcagccgccactacctctcctcgaattgtgctcacccaggcc
tgcgcccctgccggacagcatccatccccagtgcatcctgccactttaactgcttcgcaa
aatttgtcagctatgccattgccaatgtgctcggttagacaaacaaatgatatttctagc
aaccagatatcatcggtaagcagtgattctgtaaatcggcaaggagcagatgcagatcaa
gccaaggctggtactcaagatgcagaagcaagaaatcagtgcaatagtgcgccatctatt
gggtctccatgtgctgtgcaagccgtgccaggtcctcaagtcatagcgtcacagcaagtg
ccaatacagctgcttcagagctccgcagctaccactttcattcttacaccccaaggcttg
gtccaaattccaatccaagctttgttttctgctccatcccaggtacttatgaatcagaac
tcaactttctctgaatcctccagtatgaaagctcgtgaaccatcgataaatggagaatca
tctgataaaatcccagaagcgccaactaatttgagtaatactgcgagccaaccattgcca
agtaatggatcttcaacagaaaatacagcaagggaagccgcacagctgcagtgtccagcg
cctgatgtatctgccaagatgccaaggatactgccaacatttagcccctccaacaagtct
acgaaattcaccctttcacccaaaatgtatcctgtggttaaagtagcaaaaatcctaacc
tctaatcagcctaatgcattcacagggaatgtagtaagtagtcaatcgcctgctccatct
cagatcaccataaataaccccgagaagaagatcttcgacttgggcctcatttccttagaa
gacgagactagcgtgaaagactggctgcagggaaagagctgcacagcctatttgccgcca
tctgcttgcactctgaagaccttttctaggatcctgctgcagaagaagactttggaaaaa
agtgctttcaaactcatccctcgttctgacggaggaggaggagatgaggacgtcagtagg
aagcaggagatcctagacaacctggtggagcagaaacttaaagacaacccggcgtacagt
ctcctcaagcggcgattcctctctgcattcacattctctggggtgctggcagtttttgcg
ccaccaaaaaatgaggcgcccacatttggggtgaagagtgatgtcaaagacgaagacaaa
gtgatggagatggacatgtatgaatgctacgcctgtaacaatacagatgatcgtatggta
ggcgaaagtcccggaccaaccgcacagtcatgcccacaggagggagaaacgtcgaatcct
gacggtcagcggactccagtgaacacccggaggcgcccccagaggagaagggtgtatcgc
cgcagtgagacgtga
DBGET
integrated database retrieval system
