Bufo bufo (common toad): 120977096
Help
Entry
120977096 CDS
T07950
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbuf04515
]
120977096 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
120977096 (LRFN1)
Cell adhesion molecules [BR:
bbuf04515
]
Immunoglobulin superfamily
SALM family
120977096 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
bbuf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120977096 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_1
LRR_5
fn3
LRR_9
Ig_DSCAM-DSCAML_C
Sp38
C2-set_3
LRRCT
Noelin-1
Motif
Other DBs
NCBI-GeneID:
120977096
NCBI-ProteinID:
XP_040260796
LinkDB
All DBs
Position
8:complement(192628952..192838290)
Genome browser
AA seq
740 aa
AA seq
DB search
MEKLLCLLLMGALGYFGSAQYCPGRCICQINSPTLTMLCAKTGLLFVPPAIDRKTVELRL
TDNFITIIRRKDFSNMTNLVHLTLSRNTIIQIVPLAFSDLRSLRALHMNSNRLSALRNEH
FRGLGNLRHLILGNNQINSIQPGSFSEFVSTVEDLDLSYNNLEQLPWEDIGQMVNLNTLT
LDHNLIDHIAEGTFTMLHKLVRLDMTSNRLHKLPPDNLFLKSQVLASSRGSSSSLSISFG
GNPLHCNCELLWLRRLTREDDLETCASPEQLTDKYFWSIQEEEFICEPPLITKHYASKSF
VMEGQSVSLKCKAVGDPEPSVHWIGPDGKLIHNTTRMVVHDNGTLDIAITTLKDSGFFTC
IASNAAGETTAPVELAVVPLPLLVNNTAHIKEPDPGSSDITTSTKSGFNDTKNLQDRRIL
VDKLKSTSVVIQWPSQRHIPGIRMYQIQYNSSLDDSLVYRMIPPSNRSFLVNDLAPGREY
DLCVLAVYDDGMTSLTATRVVGCIQFNTKEEGAQCQPLHTQFLGGTMIIIIGGIIVASVL
VFIIILMIRYKVYSGQEESGKARVSNVYSQTNGQQGMACAHSCAKLGENNYEPLPPASKE
PQVDGKDPGKGENQPCSPIPAPLMEMDKRRTKTSSDLQTVALLSSLSGDQTETSALGSTT
SLCLITSEGQAHVGAKAPPRTYQHRFSFDGDYSLFQSHSYPRRARTKRHMSALELHTQEA
DLGHRRVTFSSTEWMLESTV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttgctgtgcctgctgctgatgggagctctggggtactttgggagcgcacag
tattgccccggtcgctgtatctgtcagatcaactctccaactctcaccatgctgtgtgcc
aagacaggacttctcttcgttccaccagccattgaccgaaagacagtagagttacgacta
acagataattttattaccatcattcgacgcaaggacttcagcaacatgaccaatctggtg
catctgacactgtcacggaatactattatccaaattgtaccactggcattctccgaccta
cgttctctaagagctttgcatatgaacagcaacagactttccgccctgaggaatgaacat
tttcgtggcttgggcaatttgcgccatttaattttaggtaacaaccaaataaattctatc
cagcctgggtcatttagtgagtttgtctccactgtagaggatcttgacttgtcctataac
aacctcgaacaactgccctgggaagacattggccaaatggtgaatctaaacaccttaact
ctagaccataatttaattgaccacattgcagaaggaactttcactatgttgcataagctt
gtgaggcttgacatgacctctaatcgtttgcacaagctgcctccagacaacctttttctc
aagtctcaagttttagccagttcaagaggttcaagttcatctctatccataagctttggt
gggaatcctctacattgtaattgtgagcttttatggcttagacgactgacaagggaggat
gaccttgagacttgtgcctctccagaacagcttacagacaagtatttttggtcaattcaa
gaggaggaatttatctgtgagcctccactcattactaaacactatgccagcaaatcgttt
gtcatggaaggacaaagcgtcagccttaagtgcaaagcggttggagaccctgaaccatca
gtccactggattggtccagatggaaaacttatccataatacaacaaggatggtagttcat
gacaatggaactttagatattgccattacaacactgaaagatagtggttttttcacatgt
atagcatcaaatgcagctggtgagaccactgctccagtggagctggcagtagtacccctt
ccactgctggtgaacaatacggctcatattaaagaaccagatcctgggtcctctgatatc
acaacttctactaagtctggatttaatgataccaagaatttacaagataggagaattctg
gtggacaagttaaagtcaacttcagttgtcatacagtggccatcacagcgtcatatccct
gggatccgcatgtatcagattcagtataacagctctttagatgactctttagtgtacagg
atgatcccaccgagtaaccgaagcttcttggtcaatgatttggctcctggacgtgagtat
gacctctgtgtcctggctgtctatgatgacgggatgacttcactaactgctactcgagtg
gtgggatgtatccagttcaacacaaaagaagaaggtgcgcaatgtcaacctctccacacc
cagtttcttggaggcactatgatcattatcattggtggaatcattgtggcttctgtgttg
gtgtttatcatcatcctaatgatccgatataaagtgtacagtggccaggaggaaagtggc
aaagcaagggtcagtaatgtatattcccaaacaaatgggcaacaaggcatggcttgtgct
cattcctgtgccaagttgggagaaaataactatgaaccattgcccccagcttccaaagag
ccccaagtggatggcaaagaccctggtaaaggggagaaccaaccttgttcacctattcca
gctcctctaatggaaatggacaagaggagaactaagacatctagtgatcttcaaacagtg
gctcttttgtcttctctctcaggagaccagaccgagaccagcgcattaggttccaccacc
tcattatgtctgattacttcagaaggacaggcacatgtgggggccaaagctcctcccagg
acttatcaacatagattctccttcgatggagactactctctgttccagagccacagttat
cctcgcagggcacggacaaagagacacatgtccgccttggagttgcacacccaagaagct
gaccttggtcatcgaagagtcacatttagcagcacagagtggatgctagagagcaccgtg
tga
DBGET
integrated database retrieval system
