Bufo bufo (common toad): 120977293
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Entry
120977293 CDS
T07950
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04110
Cell cycle
bbuf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120977293 (SMC1A)
04114 Oocyte meiosis
120977293 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120977293 (SMC1A)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120977293 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
120977293 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120977293
NCBI-ProteinID:
XP_040261084
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Position
8:complement(24394403..24426882)
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYEEDSGSEKVFARHIIGGSSEYRINSKVVQLAEYSDE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARAQIQMQLFKLYHNESEIEKLNK
ELSTKNKDIDKDKKHMDKVEEELKEKKKELGKMMREQQAIEKEIKEKDAELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVESAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLAMNMQEKSKLESELANFNPRINDIKRIIQSRDREMKDLKEKMNLVEDEVFEEF
CQEIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDYEKNQLKEDQGKVQTWEQ
SVKKDENEIEKMKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHQMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMEDISQEERGSQGE
ESGSGSQRTSTVYAREALIEIDYSELSEDLKDAVADDDIKQEMSALQQKLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTKKERFDRFNGCFESIATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPSPFFVLDEIDAALDNTNIGKVANYIKEQSMTNFQAIVISLKEEFYTKAESL
VGVYPEQGDCVISKVLTFDLTKYLDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcttgaagttaattgagattgaaaattttaagtcctacaagggtcggcagatc
atagggcccttccgcaggttcaccgccatcatcggccccaatggatccgggaaatccaat
cttatggacgccatcagctttgtactgggggagaagacgagtaatctgagagtgaagact
cttcgtgacctcatccatggcgctcctgtggggaagcctgccgccaaccgagcgtttgtg
agcatggtgtacgaggaggacagtggcagcgagaaggtcttcgccaggcacatcattggt
ggctcctctgaatataggatcaacagcaaagtagttcagctggcggagtacagcgatgaa
ctggagaagctcgggatcctcattaaagccaggaacttcttagtgtttcagggggcagta
gagtccatcgccatgaagaatcccaaggaacgtaccgctttattcgaggagatcagcagg
tcaggcgagctggcgcaggagtacgacaagcgcaagaaggaaatggtgaaagcagaggaa
gacacccagttcaactatcaccgcaagaagaacattgccgctgagagaaaggaagccaaa
caagagaaggaggaggcggaacgatatcaacggctaaaggatgaggtggcacgagcccag
atccaaatgcaactcttcaagctttaccacaacgagtctgagatcgaaaaactgaacaag
gagctgtccactaaaaacaaggacattgacaaggataagaaacacatggacaaagttgaa
gaagagctaaaggaaaagaaaaaggagctgggcaagatgatgcgggaacagcaagccata
gagaaggagatcaaggagaaggatgccgaattgaatcagaagcgtccacagtatatcaaa
gccaaggagaacacgtctcacaagatcaagaagttggaagccgccaagaaatccctccaa
aatgcccagaaacaatataagaagcgcaagggagatatggatgagctggagaaggagatg
ctgtcggtggagaaggccaggcaggagtttgaagaaaggatggaggaggaaagccagagc
caaggtcgggatcttactttagaagagaaccaggtgaaaaaatatcaccgtctaaaagaa
gaagccagcaaaagggcagcaacacttgcgcaggagctggagaaattcaacagagaccag
aaagctgatcaggatcgcctcgatttggaggaaaggaaaaaagtggagactgaagcgaaa
atcaagcagaagctgcgtgaaatagaagaaaaccagaagagaatagaaaagctggaggaa
tatatcgcaaccagcaagcagtctttagaagaacagaagaatcttgaagagactttaact
gaagaagtggaatcggctaagagaaggattgatgaaatcaataaggagttaaaccaagtc
atggagcagctgggtgatgccaggattgatcgtcaagaaagcagcagacagcagcgcaaa
gcagagatcatggagagcatcaagaggctatatcctgggtctgtgtatggccgcctgatt
gacctttgccagccaacccagaagaagtaccagattgcagtaacaaaggtgctgggaaag
aacatggatgccattattgtcgactctgaaaagacaggaagagactgtatccagtatatc
aaagagcaacgcggggagcctgaaacattccttcctcttgattatcttgaggtaaaaccc
accgacgagaagctgcgtgagcttaaaggggccaaactggttatcgatgtaatccggtat
gagccgccccatataaagaaggccctccagtatgcttgcggtaatgcgttggtttgcgat
aatgtggaggatgctcgtaggatagcctttggaggacatcagagacacaaaaccgtcgct
ctcgatggaaccttattccagaaatctggtgtcatctccggaggagccagcgacttgaaa
gccaaggcaagaagatgggatgaaaaggcagtggataaactcaaggaaaagaaggaacga
ttaacagaggagctgaaggagcaaatgaaagccaaacgtaaggaagctgaactgaggcag
gtccagtcccaggcgcatggtctgcagatgaggctcaaatattcccagagcgacctcgag
cagaccaaaactcgtcacttggcaatgaatatgcaggaaaaatccaagctggagagcgag
ctggccaatttcaatccacgaatcaatgacataaagcggatcattcaaagccgtgatcgg
gagatgaaggatctgaaggagaagatgaatttggtggaagacgaggtgtttgaagagttc
tgtcaggagatcggagtgcgcaacatccgagagttcgaagaggagaaggtcaagagacag
aatgagattgccaagaagagattagagtttgagaaccagaagacccgtctgggtattcaa
ctggactacgaaaagaatcaactgaaggaggaccaagggaaggtgcaaacttgggagcag
tctgtgaagaaagatgaaaatgaaatcgagaagatgaaaaaggaggagcaaagacacatg
aagatcatcgatgagacgatggctcagttacaggacctcaaaaaccaacatttggctaaa
aagtctgaagtgaatgacaagaatcatcaaatggaagagatccgcaagaagctagggggc
gccaacaaggagatgacacatctacaaaaagaagtcactgccattgagaccaagctggag
cagaaacgcagcgatcggcacaacttgctgcaggcctgcaagatgcaggatattaaacta
cccctgtctaagggcacaatggaagacatcagccaggaagagcgcggctcccagggagaa
gaatctggcagcggctcccagaggacctctactgtgtacgctcgggaagccttaatcgag
atagactacagtgaactttctgaagacctcaaggatgctgtggcagatgatgacattaag
caagaaatgagtgctctacagcagaagctgaatgagcagcagagtattttgcagcgtatc
tctgcccccaacatgaaggcaatggagaaactggagagcgtcagggacaagttccaggag
acgtctgatgagtttgaagccgctcgtaagcgagctaagaaggccaagcaggcatttgag
cagacaaagaaagaacgatttgaccggttcaatggttgcttcgagtccatagcaaccaat
atcgatgaaatctacaaagccctctccaggaacagtagtgcccaggctttcttgggacca
gaaaacccagaggaaccctacctggatggcatcaactacaactgtgtggcccctgggaaa
cggttcagacccatggacaacttgtctggaggagagaaaactgtagcagcacttgccttg
ctctttgcaattcacagttacaaaccatccccattctttgtactggatgaaatagacgct
gccttggataacaccaacataggcaaggtggccaactacattaaggagcaatcaatgacc
aacttccaggcaattgtcatctcccttaaggaggaattctacaccaaggccgagagcttg
gttggggtatatccagagcaaggggattgtgtgatcagcaaggtcctgactttcgacctc
accaagtacctagatgccaacccaaatccaaacgagcagtag
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integrated database retrieval system
