Bufo bufo (common toad): 120977671
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Entry
120977671 CDS
T07950
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03083
Polycomb repressive complex
bbuf04980
Cobalamin transport and metabolism
bbuf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120977671 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120977671 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120977671 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbuf01009
]
120977671 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120977671 (HCFC1)
03029 Mitochondrial biogenesis [BR:
bbuf03029
]
120977671 (HCFC1)
Protein phosphatases and associated proteins [BR:
bbuf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120977671 (HCFC1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120977671 (HCFC1)
HMT complexes
COMPASS/SET1 complex
120977671 (HCFC1)
MLL-HCF complex
120977671 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120977671 (HCFC1)
Mitochondrial biogenesis [BR:
bbuf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120977671 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
120977671
NCBI-ProteinID:
XP_040261637
LinkDB
All DBs
Position
8:complement(25958438..26007458)
Genome browser
AA seq
2204 aa
AA seq
DB search
MASTPAVTGSSSALQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
RLKAKTPKNGPPPCPRLGHSFSLVGSKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPG
SGVVAWDIPITYGILPPPRESHTAVVYTEKDSKKSRLVIYGGMSGCRLGDLWILDIDTLT
WNKPNLNGVAPLPRSLHSATTISNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DSMAWEHIVMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLET
EKPPAPARVQLVRANTNSLEVSWGAVSTADSYLLQLQKYDIPAAAAAMSPANPVPSVPVN
PPKSPAPAAAAPTVQPVAHTGITLVPQPASMPPTTATIQVLPAIPGNPIAVSAAPRPQAV
LKVGGPQSTVGTPLVTVRPATQVGKAPLTVTSLPPGVRMVVPAQSAQGTTIGGSQPMSGM
AALAAAAAATQKIPPSSAPTMLSMPAGTAMVKSVAMSSATTTLPTSVKMASSPIMVSNPA
TRMLKTAAAQVGTSVSSAANTQTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKS
PISVPGGSTLISNLGKMMSVVQTKPVQTSAITGQASSGPLTQIIQTKGPLPAGTILKLVT
SADGKPTTIITTTQAGGTGTKPTILGISSVSPNTSKPGTTTIIKTIPMSAIITQAGATGV
TNTAGMKSPITILTTKMVTSGTGTPAKIITAVPKLTSHGQQGLTQVVLKGAHGQPGTILR
TVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGMTSLGTVTGTVSSSLAGAGVHNTASLAT
PINTLGTIATLSSQVINPGAITMSAAQTSLTAASGLSTPTITMQPISQPTQVTLITTPSG
VEAQPVHDLPVSILASPTSDQPTATVTIADSGQGDQPPGTVTLVCSNPPCETHETGTTNT
ATTTLVNLNSLVQQPGGTLQFVCEGQEPGTFVATALGQANGNIVRVCSNPPCETHETGTT
QTSSTAMANITSGQPGTVVRICSNPPCETHDTGTTQTSTTATANIGSGQPETAGNVCSNP
PCEIHDTGTTPTPTTARSNIGTEQNELLQRQAHTQPCETFQTVSTCTVMTAHANVQSEKV
PQVCSNPPCETHETNATDTDTTASSNLESEQPSDVARVCINRPSENHETGTTHTPTTARS
NIGTGLSENQNRTLNNPPCETHQTISTKTTMSVQAKYSSGSSNLIEVENGGAASTKDGEK
SNPAKTQSLSSKHPCETLMTGTTPTATTAKSCMNSGTPESNQPRSDSDPCETHQANSTST
TMSLSADKASDDDQSAKPVCSNPPCETHETGTTNTPSTARSGNGTEQNTGETHQTTSTGT
VMMASESQPNTLEQRVCSNPPCETHETNTTNTATTSSSSMGSNPPPAAPTQQVCSNPPCE
THETGTTHTATTVTSNMGTNQDQTPAANGQGEEETVPTEESASSSTPSDSAATSSVTIVA
VEASSSPVHSAVPVVSRAVTTVTQSTPIPGPSVPNIGSLTDPPTEDSVQGSESVPCAEQS
EAPISADILQPPEDVQAEPEAQPMDTAVPEHTEAELQAAMEAEHAQEAAAAAEQQAVEQL
SLPQELMAEGQTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVM
GFQAAAGEPMDTSDVAHAELRHLTSEGPTTTIPIVLTQQELAALVHQQQQLQEAQHQQQL
QQQLQQQQLQQQQQLQQQLQQQQQLQQQQQIQQQQLQQQQLQQQQLQQQQLQQQQLQQQL
QQQQLQQQQLQQQQLQQLQIQQLHHVPTEALAPADSLNDPASESNGLNELTSAVTSAVSL
LPSTATDSLAPTNTFTAPQPVVIASPAKMQAAAALTEVANGIESKQDSQPQQPKAPLKKE
NQWFDVGVIKATNMMVTHYYLPADDSTNDDDSGALPDYTQLKKQELQPGTAYKFRVAGIN
ACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQ
SSQSSGEQKTTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGY
GPATQVRWLQESSKDGAAGKPGNKRPVSSPDMKSTPKKAKPDHP
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaccggcggtgaccggttcatcctccgccctgcagccccgttggaaacga
gtggtcggttggtcgggcccagtccctaggccccggcacggacacagggccgtggccatc
aaggagttaatcgtggttttcggcggaggaaacgaagggatcgtggacgagttacacgtc
tataatacggcaaccaaccagtggttcattcctgcagtgagaggcgatattcctccgggt
tgtgccgcctatggatttgtctgtgatggcactcgtcttcttgtcttcggaggaatggtg
gagtatggaaaatacagcaatgacttgtatgagctgcaggcaagcagatgggaatggaag
agattaaaagcaaaaacaccaaaaaatggcccccctccatgtcctcgccttggacacagc
ttttcattggtggggagtaaatgttatctgtttggtggattggcaaatgatagtgaagac
ccaaagaacaacattcccaggtacctgaatgatctctatatattggagctccgtcctggc
tctggggttgtagcttgggacattcccatcacatatggcattctcccacctcctcgagaa
tcacatactgcagttgtatatacagaaaaagacagcaaaaaatcccgcctggtgatctat
ggtggtatgagtggatgccggcttggcgatctctggatattggacatagacacgctgacg
tggaataaacccaatctaaatggcgttgctcctcttcctcgaagtcttcattctgccaca
actataagcaacaagatgtatgtttttgggggctgggtgcctttagtaatggatgatgtc
aaagtagccactcatgagaaggaatggaaatgtacgaacaccctcgcctgtctcaacctt
gactccatggcatgggaacacattgtcatggacaccttggaggacaacattccacgggct
cgcgccggccattgtgccgtggcaattaatacgcgtttgtatatatggagtggtcgggat
ggataccgaaaggcctggaataaccaagtgtgttgtaaagacctctggtaccttgaaaca
gaaaaacccccagcacctgctcgtgttcagttagttagagcaaatactaactctctagag
gtaagctggggcgctgtatcaacagcagacagttatttgctgcaacttcagaagtacgac
ataccagctgctgcagcagcaatgtcgccggccaatccagttccgtctgtgccagtgaat
ccgcccaagagtccagctcctgctgccgctgcgccaacagtgcaacctgtagcacacact
ggcattaccctggtacctcagcctgcctctatgcctcctacgacagccaccatacaggtc
ttgcctgcaattcctgggaacccaattgccgtttctgctgctccccgtcctcaagctgtt
ctgaaggttggcggacctcagtccacagtgggcaccccgctcgttactgttcggccagct
actcaagttgggaaagcgcctctgacagtcacatctcttcctcctggtgtgcgaatggtg
gtacctgcccagagtgcacaagggactactattggtggcagtcagcccatgagtggcatg
gcagctcttgctgcagcagctgctgctacacagaagatccctccctcctctgcgccaaca
atgttgagtatgcctgctggaactgccatggtaaaatctgtcgccatgtcatctgctacc
acaacactcccaacatctgtgaaaatggcatcatctccaattatggtcagtaatccagcc
acacgaatgctgaaaactgccgcagctcaagtgggcacttcggtttcttctgcagccaat
acacagactcgtccaatcattacagtgcataagtcaggaactgtcacagttgcacagcaa
gcccaagttgtaactacagtagtcggtggtgtcacaaagactatcactcttgttaaaagt
ccaatttctgtgcctggtggcagcaccctgatttcaaatcttggtaaaatgatgtctgta
gttcagaccaaaccagtccaaacctctgctataacaggacaggcgtcttctgggccctta
acccagattattcagacaaagggacctctccctgcaggaaccattctgaagttggtgaca
tcagcagatggcaaaccaacaacaattatcacgaccacacaggctggaggaacaggcacc
aaacccaccatcctaggcatcagcagcgtatcacccaacacatcaaagcctggtaccaca
actatcattaagactatccctatgtctgctattatcacgcaagcaggagcaacaggtgtt
acaaacactgctgggatgaagtcaccaatcaccatcctgacaactaagatggtaacatca
ggcactggaactcctgctaaaataattaccgctgttcccaagcttacaagtcatggtcag
cagggattaacccaggttgttttaaagggggcacatggccagcctggcactatcctccga
accgttccaatgggtggcgtcagactagtcacacctgtaactgtatcggctgtcaaacct
accgtaacaaccctagttgttaagggtaccacagggatgaccagtttaggcactgtcaca
gggacagtttcttcaagcctggcaggagctggggtgcataacactgcttcccttgcaact
ccaataaatactttgggaaccattgcaaccctttctagtcaagtgattaatcctggagcc
attacaatgtctgcagcacaaacttctctgactgcggcctctggtctgagcacaccaacc
atcactatgcagccaatatcacaaccaacccaagtaacgttaatcaccactcctagtggg
gttgaagcacaacccgtgcatgaccttcctgtctccatcttggcttcaccaaccagtgat
caacccactgcaactgtaactatagcagattcaggtcaaggagaccagccgccgggcact
gttacacttgtgtgttccaatcctccctgtgagacccatgaaacaggaactacaaatact
gcaaccaccacccttgtcaacctcaacagccttgttcaacaaccaggtggcaccttgcag
tttgtttgtgaaggccaggaaccaggaacatttgtagcaacagctctaggtcaggcaaat
ggcaacattgtcagggtctgttccaatcctccttgtgaaactcacgaaaccggaaccaca
caaacgtcatccacagcaatggcaaatatcaccagtggacaaccagggactgtagtaaga
atatgttctaatcccccttgtgagacccacgatactggaaccacccagacatcaactaca
gcaacggcaaacattggcagcggacagccagaaacggcaggtaatgtgtgttctaatcca
ccatgtgaaattcatgataccggcacaactccaactcccacaactgcaaggtcaaatatt
ggcactgaacagaacgagctcttgcagagacaggcgcatactcaaccatgtgagactttc
cagactgtatctacctgtactgtcatgactgcgcatgccaatgttcagtcggaaaaggta
ccgcaagtttgctccaacccaccttgtgaaacccatgagacgaatgcaaccgacactgat
actacggcttcgtctaacttggaatcagagcagccaagtgatgttgctagggtgtgtata
aatcgaccatctgaaaatcatgaaacgggcactactcacacgccaaccacagcaagatca
aatataggcacaggactttcagagaaccaaaatagaaccctaaacaacccaccatgtgag
actcatcaaaccatttccacaaaaacgaccatgtcggtgcaggcaaagtacagttctggg
tcatctaaccttatagaggtggaaaatggtggtgcggcatctaccaaagatggtgaaaag
tcaaatcctgccaaaacccagtcactctcctcgaaacatccttgtgagactctgatgact
ggcactactccaacggcaaccacggccaaatcctgcatgaactctggaacacctgaaagt
aaccagccgcgttctgacagtgatccttgtgagacccatcaagcaaattccacaagtaca
actatgagtttgtctgccgacaaagcaagtgatgatgatcagagtgcaaaaccagtatgt
tctaacccaccttgtgagactcatgaaactggtactacaaacaccccaagtacagcaagg
tctggtaatggcacagaacaaaacactggtgagactcatcagaccacttctacagggact
gttatgatggcgtctgaatcgcagcccaacactttagaacaacgggtatgctccaacccg
ccatgtgagacccacgaaacaaacaccaccaacactgcaactacatcttcgtccagcatg
ggaagcaatccaccccctgcagctcctacgcaacaggtctgctcaaacccaccttgtgaa
acgcatgagacaggaacaacccatactgccacaacagtcacctccaacatggggacgaat
caagaccagaccccagctgcaaatgggcaaggagaggaggagactgtacccactgaggaa
tctgcttcaagtagcacccccagtgactccgctgcaacgtcctctgtgactattgtagca
gtggaagcctcttcttctccagtacattcagcagttccagttgtctccagggcagtgaca
actgtaacacagtcaacaccaatacctggtccttctgtaccaaatattggatctttgact
gacccacccacggaagacagcgtgcagggttcagaatcggtcccttgcgctgaacagagt
gaagctcccatctctgctgacatcctccagcctcctgaagatgttcaggcagagccagag
gcacagcctatggacactgcggtgccggagcataccgaagcagagctacaagctgcaatg
gaagcagaacatgctcaggaggctgctgcagccgccgagcagcaggctgtagaacagttg
tccctccctcaggaacttatggcagaggggcagacaaccacgctcatggtcacagggtta
acaccagaagaactggcagttacagctgcagctgaagctgctgcccaagctgctgccaca
gaagaggctcaagccctggctattcaggccgtgctgcaggctgcacagcaagcagtgatg
ggtttccaagcagcagctggagagccaatggacacctctgacgtggctcatgcggagctg
cgtcatctgacgtctgaaggacccaccaccacgatacccatagttctaacgcagcaagaa
cttgcagcattggttcatcagcagcaacagctacaagaagcccaacatcagcaacagtta
cagcagcagcttcaacagcaacagttgcagcagcagcaacagttgcagcaacaattgcag
cagcaacaacagttgcagcaacagcagcagatacagcaacagcagttacagcagcagcag
ctacagcagcagcaattacagcagcagcagctacagcaacagcagttacagcagcagcta
cagcaacaacagttacagcagcagcagctacagcaacagcagttacagcaacttcagatc
cagcaattgcaccatgttcctacggaggccttggcaccagcagacagcctcaatgaccct
gccagtgaaagcaatggacttaatgagcttactagtgcagtgaccagtgctgtgtcgctt
ctgccatctactgctacagacagtttggctcctacgaacacattcactgcacctcaacct
gtggtgatcgctagtcctgccaaaatgcaggcggcagcagcacttaccgaagtggcaaac
ggcattgagtcaaagcaagactctcaaccacagcagccgaaagctccgttaaaaaaagag
aaccagtggtttgacgtaggcgttatcaaagctactaatatgatggtcacacattactac
ttacctgctgatgattctactaatgatgatgactccggtgctctcccagattacactcag
ttaaagaagcaggaacttcagccaggcactgcctacaagttccgtgttgctggcataaat
gcctgtggtcgcggaccgttcagtgaaatctcggcctttaagacctgcctgcctggtttc
ccaggtgctccttgtgccataaagatcagcaagagcccagatggtgctcacctgacgtgg
gaacctccttctgtcacttctgggaagatcatagagtactctgtctatcttgcaattcag
agcagtcagagcagtggagaacagaaaacaacaccagctcagttggcattcatgcgagta
tactgtggccctaatccctcctgcctggtgcagtcctcgagcctttcaaatgctcatata
gactataccacaaaacctgccatcatcttccgtattgcagcacgcaatgagaaggggtat
ggacctgccacccaagttaggtggttgcaagaatccagcaaggatggtgcagccggaaaa
ccaggaaataagcgtccagtgtcttctccagacatgaaatcaactccaaagaaagcaaag
cctgatcacccgtga
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integrated database retrieval system
