Bufo bufo (common toad): 120977706 Help Entry 120977706         CDS       T07950                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bbuf  Bufo bufo (common toad) Brite KEGG Orthology (KO) [BR:bbuf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bbuf03021]     120977706 (SETX) Enzymes [BR:bbuf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120977706 (SETX)     5.6.2.5  RNA 5'-3' helicase      120977706 (SETX) Transcription machinery [BR:bbuf03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      120977706 (SETX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 UvrD-helicase AAA_22 SLFN-g3_helicase Helicase_RecD AAA_16 DUF4164 Motif Other DBs NCBI-GeneID:  120977706 NCBI-ProteinID:  XP_040261696 LinkDB All DBs Position 8:5571857..5599981 Genome browser AA seq 2490 aa AA seqDB search MTSQTRTMSTCRWCTPGAPVSAELLNSYAARKLQSDDLIGANDDLSYCMECVAEYHRVRE QAPHLHKALWKMETARITAHLEKSLREEIEDDEVLLVEEDGEKQLFGYAGLESNVRVPLL EILKYPYLLLDRRVCELCVDALCKMETVNNPFQVYEKVPGIYLLLVHPNESIRRWAILTA RAQGKVDRDDYYDLQEVFTCLFKFIELGLFESPDIYSSSEVEDGKLILLPAHLYDTANYK NYWLGVCMLLTVLEEEAMDSLLLGPDKQNDFMQSILHMMEKRTDDESTNPFWPALHCFMI ILDRLGSKVWGQLIDPIQAFQTIISSPSYNNEIENIRRSCQRLAKDQPDPEDDDGDDLVS CSQMVYNFNSEKPKKDTGWKSAICPDYCPNMYDDMQSLANILQSDTGQDMRVHNSTFLWF IPYVQSVMDLKDLGVAYIMEVIHHLYSEIKEALSQRSRPCDKVSELFIRVLVSIIELHRS KKCLHLLWVSSHKWVEALIKGSLIPTKDMVARPNSRITSTTSPLSSSPNSQAPSSVQFAC IQLIRSLLREGYQLGQNSTCKQYLDKLNLVIRGNALWNLESDIQGLQNCLIEIIKVIKNR TSMAPNSALEQTTMSKVQSVPFIKTERIDEDEEWYGCSSSSPLPSPDVPPVTTRSGCSTG SPLPSPDIQPTVTSKPSQHGAEGLLFPIKKEPQEVQAKGSSLHGSVLKTNIKKQPFDEIG QENAQCKEKPVGWKSKLSEVMAKSSNRICKKEPSASESNVSSSSEASSALKPCYVRIKKE PDLWQKAKSCSNGGDANEESDDVDDDIPLIQVKKSLHEKTKGSAADNLAVSERLRRLTLE NDQATNLVKRETSNEEAECNDCVMEGEGEDDLPLSEIKKRLLLKGKKLAGCMVDRDLARS AAQEATPSQEFGLIERKVKETRRSLLSDNSSGPIIILSDDSSDEEQKDFLKFVKTEKRES GQEARSSSSAKIMQMKSAQIKQEPDIEIVDEYNSQRFEFETEDEIYSAWEDPQLQEEKPD LLSKCKKTETDETPDNDIVSADKLDQWGYDTDYICDDVIEKAAEDAERQFQESLKASNAQ TGGECSNDKSSHEGTALARFYGKSSRETETKNRKFDSRSKPPKMTKETSSIRPKSRAELS AKQNKVPSVKSTKTKSPRKAQGQVRKFSSPGKASLAVVPPKKVRKCPEQSSTAEKLGLKK GPRKAFDLSQRSLNSLTELREHGKSAGCVEPKRQKAKLISPQSIMVKRNKKMLACQDLLQ FYRQTRPKDVEKRRSSSNSENSFQTSENPAKPVRKPTDGDSSLQSRAEKKEQLNGTSRKK ESSRMSPQASTSSKTNEEEDWNDPPQTKMDPPSPSEPAKTELEDYEEEEDDDPLFLTQAD PLDMDLCSQVESEIIQENRPSIVEEQVAPVQQEANQTLKCKYVDCSEPVQAPGCHCPKHN TAEKTDDHLFVRPGLPLSLQKPTKAATAKVFSTETASRTASLTKDLENNPKYPTIPKSKA QLPKPPLPKLVVPQRKPPAPLTTSSVLQPLINQNNLPLPPTSNSGPDMGKSFVAGRLPQL DQAWLMQLVLRWKYEMFDNFQQFGAPSDLCPLPLMPVPLKFSGYDDYFKVFFPLMLQNAF ESLEQEWRDKRRPQSAHPYKLHLQNFCLDSQVNRGEFRAWIRDKDLHFQHHPKEDDLVFL LTPEPPDEHSREERESSASLVYHMGHVFRFTRSQNTQNFEREQYSLCDLCIHTHGNLSAF RNQQVQCVIIGSFVTTLRQFKALLQLQRNPLFRPIIYPNATDLSPKGSAENIPTSSLRHL REYNSDQMFAIEQAYAMVTQPPRFPKICLIHGPPGTGKSKTIVGLLFRMLMEKRNSGVPN QNFNAKNKRNRVLVCAPSNAALDDLMKKIILEFKQKCHDKNNTLGNCGDINLVRLGAEKT IDSDVVKFSLDCQVNYRLNRPHQDHGILRHKEALDRQLDQLSRQRAMERSNKQTYQELDQ KMNRLSKERQRLANDLRELRRRPQEIQRNIILESHVICCTLSTSGGVLLESAFRQLGHEP FSCVIVDEAGQSCEVETIIPLLHRCTKLVLVGDPKQLPPTVISTKAEDLGYGQSLMARLC RQLETAGHGSLILQLTVQYRMHPDICLFPSRHFYKQVLKTDRATEEARCSSDWPFQPYMV FDVTDGYEVKERESFANPQELKMVVALVKLIKSKKREFTFRNIGIITPYRAQKMQIIEQL QREFGKDSRPSEVDTVDGFQGRQKDCIIVTCVRANFVQGAIGFLASQQRLNVTITRARFS LFILGSLRTLMENKDWNSLIQDAKKRGALFKTREENYQKDVNRILKLKTAVSHSSRPAVE RHASGSPSNTTPAETPSREHVLPPQLAVQPPQRIIVHPAVDIRPMQSRMTAPVASSVTRA KLPDPRLARRQSEESRDSSPTSCAVQNLQSRSQTHVSSSSSSVTGVKRPSYPAPGDPPPH GAHRFSRDQDYRDPITQFDQNQDAKKRRTS NT seq 7473 nt NT seq  +upstreamnt  +downstreamnt atgacgagccagaccaggacaatgagcacgtgccgctggtgcacgccgggcgctcctgtc tccgcggagctgctgaacagttacgccgccaggaagctacaaagcgatgacctcatcgga gccaacgatgacctctcctactgcatggagtgcgtggcggagtaccaccgggtccgggag caggccccgcacctgcacaaggctctgtggaagatggaaactgcgcgcatcaccgcgcat ttggagaagtctctgcgggaagagatagaggacgacgaggtgttgttggtggaagaagat ggagagaagcagctgtttggttacgccggcctcgagagtaacgtgcgggtccctctcctc gagatcctcaagtatccgtacttgttgctggacagacgcgtctgtgagctctgcgttgac gccttgtgcaagatggagactgtgaacaaccctttccaagtttacgagaaagtgccaggg atctacctcctccttgtacaccccaatgagagcatccgccgttgggccattttgactgcg agggctcaggggaaggtggaccgggatgactactacgacctgcaggaagtctttacctgc ctgtttaagttcattgaactcggcctgtttgaaagtcctgacatttacagcagtagtgag gtcgaagatggaaagctcatcctcctgccggctcacttgtacgataccgccaattacaag aactactggctaggggtctgcatgttactgaccgtcctggaggaagaggccatggactcc ttgctgctgggaccagacaagcagaacgacttcatgcaatccatccttcacatgatggag aagcggacagatgatgaaagcacaaatcccttttggcctgcactccattgcttcatgatc atcctcgatcgcctagggtccaaggtttgggggcaactgattgatccaatccaagcattt caaaccatcatctccagcccgagctacaataacgagatcgagaacataaggagaagttgt cagaggctggccaaggaccaacccgatccagaggatgacgacggcgacgacttggtgtcg tgtagtcagatggtatataacttcaacagtgaaaaaccaaaaaaggacactggatggaaa agtgcaatttgcccggactattgtcctaacatgtacgatgatatgcaaagcttggccaac attctgcagagtgacactggccaggatatgagagtccacaatagcactttcttgtggttt ataccctatgtccagtcagtcatggacctgaaagacctgggggttgcttacatcatggag gtgattcaccacctgtactcggaaataaaggaggccctcagtcaaagaagccgtccgtgt gacaaggtctcagaactttttatcagggtcttggtttctatcattgaactgcatagaagc aaaaagtgccttcacttgctgtgggtgagctctcacaagtgggtcgaggccctcatcaag ggctctctgattccaaccaaagacatggtggcacggcccaactcgagaatcacctccacc acctcacccttgtcgtcttcaccgaactctcaggccccatcttctgtacaatttgcgtgt atccagctgatcaggagccttttgcgggagggatatcagctgggacagaactctacttgt aagcagtatctggacaaactcaatctcgtcatcaggggaaatgctctctggaacctcgag tcggacattcaaggtttacagaactgccttattgaaattataaaggtcatcaagaacagg acatccatggctcctaattccgccctggagcaaacgaccatgagcaaagttcagtctgtt cctttcatcaagactgaaagaattgatgaggatgaggaatggtacgggtgcagtagtagc tctccgcttccatctccagatgtccctcctgttacgaccaggtctggatgtagcactggt tctccattaccatctccagatatccaacccactgttaccagtaagccttcacaacatggg gcagaagggttgcttttcccaattaaaaaggaacctcaggaggtccaagccaaaggttct tccttgcatgggtctgttttaaagactaacatcaaaaagcaaccgttcgatgaaattggc caagaaaacgcgcagtgcaaagaaaagccagtgggctggaagtcaaaactaagtgaagtc atggcaaagtcttccaatcggatatgtaaaaaagagccttcagcgtctgaaagtaatgtc agcagcagctctgaggcatccagtgcattaaaaccatgctacgtgcgcattaaaaaggag ccggacttgtggcagaaagcaaaatcttgtagtaacggaggtgatgccaatgaagaaagt gacgatgttgatgatgatattcctctgatacaagtcaaaaaatccttgcatgaaaagacg aagggctcagctgcagacaacctcgcagttagtgaacggcttcgaagactgacgttagaa aatgatcaagcaaccaacctggtaaagagggagaccagcaatgaagaggccgagtgtaat gattgcgtgatggaaggcgaaggagaggacgatctgccattatctgaaatcaaaaaaagg ttgctcctaaagggtaagaagttggccggctgcatggttgaccgggatcttgctcgttca gctgctcaagaggcgaccccatcccaagagtttggccttatagaaaggaaagttaaggaa acgagaagatctttgctctctgacaattcctctggtcccatcataatcctctctgatgat tcttcggacgaagagcagaaagattttcttaagtttgttaaaaccgagaaaagggaaagc ggccaagaagcaagatcatcttcttcagccaagattatgcagatgaaaagtgcccaaata aaacaggaacccgatatagaaattgtcgatgagtacaactcccagcgtttcgagttcgaa acagaggatgagatttattcagcttgggaagacccacagttacaggaggaaaaacctgat cttttaagcaaatgtaaaaaaacggaaactgacgaaactcctgataacgatattgtatcg gctgataaacttgatcagtggggatatgacacagattatatatgtgatgatgtcattgaa aaggcagcagaagatgcggagaggcagttccaagaatccttaaaagcttcaaacgctcag acgggaggcgaatgcagcaacgataaatcttcacatgaggggacggctttagctcggttt tatgggaaaagttcaagggagaccgaaactaaaaatcgcaaatttgattctagaagtaaa ccgcccaaaatgaccaaagaaacttcctcgatcaggccaaagtcaagagcagagctgtcg gcaaagcagaataaagttccaagtgttaaatctacaaaaaccaaaagcccacgtaaggca cagggacaagttagaaaattcagcagcccaggcaaagcatcacttgccgtggtcccaccg aagaaagtacgcaagtgtcctgaacagtcttctaccgccgaaaaacttggcctaaagaag ggccctcgcaaagcctttgacttgtcccaaaggtctctcaatagcttaactgaactacgt gaacacgggaagtcggccgggtgtgtggagcccaagaggcagaaggcgaaactcatctct ccacaatccataatggtgaagaggaacaagaagatgttggcttgtcaagaccttcttcag ttttaccgtcaaactagaccgaaggatgttgaaaagagacggtcgagtagcaactctgag aacagctttcaaacttcggagaatcctgcaaagccagtgagaaagccgacggatggcgat tcctctttacagagtagagcggagaaaaaggaacaactaaatggtacttcaaggaaaaag gaatcttctaggatgtctccacaagcttctaccagctctaaaacaaatgaggaagaagac tggaatgaccctccgcagaccaagatggatccaccttcaccttctgagccggcaaagacg gaactggaggattatgaagaagaagaggatgatgaccctttgtttttaacccaagctgat cctcttgatatggacctgtgctcacaagtagagtctgagatcattcaagaaaacaggccg tccattgtggaggagcaagtggcgcccgtgcaacaagaggcgaaccagactttgaaatgc aaatatgtggactgctcagagcccgtccaagctccgggttgtcattgtcctaagcataat actgccgagaaaaccgacgatcaccttttcgttagacccggtttgccgctatctctccaa aaacctacgaaagcagccactgccaaggttttcagtacggagaccgcttccagaactgcc agtctcacgaaggacctggaaaacaatccaaagtatccaacgattccaaaatctaaagct caacttccaaagccccctctgcctaaactcgtcgttccacaaagaaagcctccggccccc ctcactacaagcagtgttttgcagcccctcatcaatcagaataatctcccacttccaccc acgtctaacagtggtccagatatggggaagtcttttgtagctggacgcttgccacagctg gaccaggcctggctcatgcagctggttctgcgctggaaatatgaaatgtttgacaacttc cagcagttcggagcccccagtgacctctgcccattaccactgatgccggtgcctctgaag ttctccggttatgatgattattttaaagtctttttccctttgatgctccagaacgctttt gaatcactggagcaagaatggagagacaaacgaaggccacaaagtgcccatccgtataag ctccacctgcagaatttctgcctggatagccaagtcaaccggggagaatttcgagcctgg atacgggataaagatttacacttccagcatcatccaaaggaggacgatttggtgtttctg ctcacgccggagcctccggacgaacattcccgagaagaaagggagtcttccgcgtcactg gtctatcatatgggacacgtcttcagatttacccgctctcagaatacgcagaactttgag agggaacagtactcgttgtgtgacctgtgcatccacacgcacggaaatctgtcggcgttc cgcaatcagcaggtgcagtgcgttataatcggcagctttgtaacgaccctgcggcagttt aaagctctgctgcagctacagaggaacccgctgttcagaccgatcatttatcccaacgcc acagacctctcaccgaaaggcagcgctgaaaatattcccaccagctccctccgccacctg cgggaatataacagtgaccagatgtttgccatcgaacaggcctacgccatggtgacccag cctccacggtttcccaagatatgtctgatccacggacctccaggaacgggcaaatccaag actatagttggcctgttgttcagaatgcttatggagaaaaggaacagcggtgtcccgaat cagaacttcaacgccaaaaataaacgcaaccgagttctggtctgtgccccgtccaatgct gcgctggacgacctgatgaaaaagatcatattggagttcaagcaaaaatgtcacgacaaa aataacacgctgggaaactgcggcgacataaacctggtgcgtctgggggcggagaagacc atcgattcggacgttgtcaagttcagcctggattgccaggtcaactacagactgaacaga cctcatcaggatcatggcattctccggcataaggaagccttagacagacagctcgaccag ctgtcccgccagagagcgatggagcgctccaacaagcaaacctatcaagagctggatcag aaaatgaacaggctgtctaaagagcggcaacgtctggctaacgatctgcgagagctgcgc aggagaccacaggagatacagcggaatatcatcctagagtcccacgtcatctgctgcacg ctgagcacgagcgggggggtgctgctggagtcggccttcaggcagctgggacacgaaccc ttcagctgtgtcatcgtggatgaggccggacagtcgtgtgaggttgagaccatcatccct cttctccacagatgtacgaaactagttttggtgggagaccccaagcagctgcctcccact gtcatctcaacgaaagctgaagatttgggctacggacagtccctgatggcgcggctctgt cgccagctggagaccgcaggccacggctccctcatcttgcagctgacggtccagtaccgg atgcacccagacatctgcctctttccatctaggcatttctacaagcaagtgctgaaaaca gaccgagccacggaagaagcgcggtgttcttcagattggcccttccagccatacatggtg ttcgatgtgacagatggctacgaagtgaaagagagggagtcgtttgccaacccacaagag ctcaagatggttgtggcactggtaaagctcatcaaaagcaagaaaagggaatttacgttc cggaatatcggcatcatcaccccgtaccgcgcccagaagatgcagatcatcgaacagctt cagagagaatttggaaaggactcgaggccaagtgaagtggacaccgttgatggattccag ggtcgccaaaaggactgcatcattgtgacgtgtgttcgtgccaactttgttcaaggggct attgggttcctggcgagtcaacagcgcttgaatgtgaccatcacaagggccaggttcagt ctcttcatcttggggagcctccgaaccttaatggagaacaaggactggaacagcttgatt caggatgcgaagaagcgaggggctctcttcaagacgagagaggaaaactaccagaaagat gtcaacaggatcctgaagcttaaaaccgctgtcagccactccagtaggccagcggtggag cggcatgcgtccggcagtccttccaatacaacgcctgcagagacgccttcaagagaacat gtgttacctcctcagctggcggtccagccacctcagcggatcatagttcatccagccgtg gacattcgcccaatgcagagccgaatgactgctccggtggcatcttcagtgacgagggcg aagcttccagatcccaggctggcgcggcggcagagtgaggagtcgagagattccagtccc acgagctgtgcggtgcagaatctccagagccgttctcagacccacgtctcctcctcttca tcatcagtaactggagtcaagcgaccttcatatcccgcccctggtgacccgccgccccac ggagcacaccgcttctccagggaccaggactatcgggaccctatcacacagtttgatcaa aaccaggatgcaaagaagaggaggacatcctag

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