Bufo bufo (common toad): 120977883
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Entry
120977883 CDS
T07950
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120977883 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120977883 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbuf00536
]
120977883 (TNC)
Glycosaminoglycan binding proteins [BR:
bbuf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120977883 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
EGF
Fn3_Dep-1_2nd
Pur_ac_phosph_N
hEGF
Fn3_Dep-1_1st
NDNF
FN3_Tor_3rd
DUF4998
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
120977883
NCBI-ProteinID:
XP_040261973
LinkDB
All DBs
Position
8:complement(42131235..42268310)
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AA seq
1835 aa
AA seq
DB search
MGYPIQVFACLLLMLSSQVNCGLIRKVIRHKRDAGLNITLPEDNQPVVFNHVYNIKVPMG
SLCSVDLDPIGTEENELKPQTELGKNDQETTLNGENQIIFTHRINIPRRACGCAAAPDIK
DLLSRLEELEDLVSSLREQCTTGAGCCSNTQTAEGTVETKPYCNGRGNYSTDTCGCICEP
GWKGPNCTEAECPGNCNNRGTCVDGKCVCNPEYTGEDCGELACLNDCNDQGKCVNGVCVC
FDGFAGEDCGEEVCRIPCSEHGKCVNGQCVCEENFTGEDCSQPLCPNNCNNRGRCVDNEC
VCDEPYTGEDCSELICPNDCFDRGRCINGVCYCEEGFTGEDCGELACPNNCNNNGKCVNG
LCVCDAGFTGDDCSELSCPNNCNNQGRCVNGVCICKEGFMGEDCGELRCPNDCNNRGRCV
NGQCICDEGYMGQDCSELRCPNDCNNRGRCVNGQCVCDEGFMGQDCSELRCPNDCNNRGR
CVNGQCVCDEGLMGLDCSELRCPNDCNNKGRCVNGQCICDEGFMGEDCSELRCPNDCNHR
GRCVNGQCICDNLFMGDDCGDLRCPDDCNNRGQCIDGQCVCTEGFTGDNCRELTCFNNCN
NQGRCVNGQCVCDEGFIGEFCSKVSPPKDLVVTNVTDKTMNLNWANKIKVTQYLITYVPT
SPGGLEFDFRVPGDQTTATIRELEPGVEYFVRVYAILKDQKSIPVSARVATHLPTTDDLR
FKTIKETTVDVEWDPLDISFDAWKLIFQNIKKQNGEISTSLESSVTSFEQQGLAPGETYE
VSIQVVKNNTLGPALTKITTTRLDAPSEVDVEDVTDTSALITWAKPMAEIDGVSLTYGTG
DEPKTTVELSEDETQYAMNNLRPDTEYEVILISRRGEMTSSPISETFTTDLDTPKNLRKV
SQTDSTITLEWKNTLANIDFFRIKFATLSGGDHEEITVPKSNQATTKAILTGLRPGTEYG
IGLTAVKQDKESSPATINAATDLDAPKDLKVSDATETTLNVQWVKPIAKFDRYQLTYITS
DDSQTEVQVPGDASSYVVTGLEPGKEYSISLVAEKGRHKSKPATVLGRTEVPRELGNLLI
SHVNWDSFKLTWAAPDNNYEKFVIQVQDTAEEENIQTILVPGELRSLEVPGLKPASKYLI
TLYGVIQGSKTKPLFGEAVTENKPEVDNLSITNVTPKSFDLSWTATQDDFNRFVIEIVDT
EKLLEPVKLNVSGNLRNISVSGLLPNTDYTIYLYGIVRDQPTQPISTSASTETEPEVGNL
VVSKITPHSLYLSWTADESGFDNFIIKMQDTNKQFEPITLTVPGSERSTVVTGLTDGTEY
EIELHGVSSGQHSPSIEGEATTAMGSPKGLSFSDITENSAKVIWLAPKIRVNKFLITYVP
VTGGASSTVEVDGSRTQTTLANLLPGVEYRVSLVSVKGSEESAPASDTLTTALDSPSGLR
VINVTDSEALALWKPSLASVDNYVISYSAKNAPAVEVTVSGNTVENDIIGLQPSTEYKLK
IYAVRGPLRSQEISTIFTTALDAPRDLTASEIQSESALITWRPPRSIITGFLLIYESVDG
TVKEVALGPDATSYRVPDLSPSSQYTVRLQAINGNFKSKFIQTIFTTTGLLYPLPRDCSQ
AILNGETESGMYTIYANGDQSQPMEVFCDMEIDNGGWIVFLRRTDGSEDFYRNWRAYSAG
FGDPNNEFFLGLENLHKITSQGQYELRVDLKDRGETVYAVYDKFGVGDSKSRYRLKVDGY
SGTAGDSMTYHNGRSFSTYDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQG
VNWFHWKGHEHSLEFAEMKIRPVSFRNLEGRRKRS
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggggtatcccatacaggtatttgcctgtcttcttttaatgctgagctctcaagtgaac
tgtggacttataagaaaagttatccgacacaaaagagacgctggtttaaacatcaccttg
cctgaagacaaccagcctgtagtgtttaaccatgtgtataatattaaagttccaatgggt
tccttatgctctgttgacctcgacccaataggaacagaagaaaatgagttaaagccacag
acagagcttggaaaaaatgaccaggaaaccactttaaatggggaaaaccagataattttt
acacatcgcatcaacatccctaggcgtgcttgtggatgtgcagcagctccagatattaag
gaccttctaagcagactggaggagttggaagaccttgtgtcatctctccgagaacaatgt
actacaggggctgggtgctgttctaatacacagactgctgaaggtacagtagaaaccaag
ccttactgcaatggacgtgggaattatagcactgacacttgtggctgtatctgtgagcct
gggtggaaaggacccaattgtacagaagcagaatgtccaggaaactgcaataacagagga
acatgcgtggatggaaaatgtgtttgcaatccagaatacaccggagaggactgtggtgaa
ttagcctgcctgaatgattgtaatgaccaaggcaaatgtgttaatggagtctgtgtttgc
tttgatggctttgctggagaagattgtggtgaagaggtttgccgcatcccttgcagtgag
catggaaagtgtgtgaatggccaatgtgtctgtgaggagaactttaccggggaggactgt
agccaacccctctgtccaaacaattgcaataaccgtggacgttgtgtggataatgagtgt
gtctgtgatgagccttacacaggagaggactgcagcgagttgatttgccctaacgactgt
tttgaccgtggtcgttgcataaatggtgtgtgctactgtgaagaagggttcactggtgaa
gactgtggtgaactggcctgtccaaataactgcaacaacaatgggaaatgtgtgaatgga
ctctgtgtgtgtgatgcaggattcaccggggatgactgtagtgaactgagttgcccaaac
aattgtaacaatcagggacgttgtgtgaatggcgtgtgcatatgcaaggaagggttcatg
ggagaggactgtggtgagctgaggtgtccaaatgactgcaataacagggggcgctgtgtg
aatggacaatgcatctgtgatgaaggatacatgggccaggactgcagtgaactgaggtgc
cccaatgattgtaacaacagaggacgctgtgtaaatgggcagtgtgtgtgtgatgaggga
ttcatgggccaggactgcagtgaactgaggtgccccaatgattgtaacaacagaggacgc
tgtgtaaatgggcagtgtgtgtgtgatgagggattaatgggactggactgcagtgaacta
agatgccccaatgattgcaacaataaagggcggtgtgttaatggtcagtgcatatgtgat
gaaggtttcatgggagaagattgctcagaactaagatgccctaatgactgcaaccacaga
ggtcgctgtgttaatggacaatgtatatgcgataatttatttatgggcgatgactgcgga
gaccttcgctgccctgacgattgtaataacagaggacaatgcatcgatgggcagtgtgtg
tgtactgaaggattcacaggagacaactgccgtgaactaacctgcttcaacaactgcaac
aatcaaggcagatgcgtaaatggacaatgcgtctgtgatgaaggattcatcggagagttc
tgctctaaagtatcacccccaaaagacttagttgtgacaaatgtaaccgataaaaccatg
aacttaaattgggccaacaaaatcaaagttactcaatatctcattacctatgttcccaca
agccctggtggcttggagtttgacttcagagtccccggagaccaaacaacagccaccatt
agagaacttgaacctggagtagagtattttgtccgtgtatatgccattttgaaggaccag
aagagtatcccagtaagcgccagggttgccacacatctgcctactaccgatgatctaagg
tttaaaacaataaaagaaacaactgttgacgtggaatgggatcctctcgatatttccttt
gatgcttggaaacttatcttccagaatattaaaaaacaaaatggcgagataagcactagc
ttggaaagttccgtgacatcttttgagcagcaaggacttgcaccaggagaaacttatgaa
gtatcgatacaggtggtgaagaacaatacactaggacctgcactgaccaagatcacaact
acaagacttgatgcccccagtgaagttgatgtagaagatgtcacagacacttctgcctta
ataacttgggcaaaacctatggctgagattgatggagtatctctgacctatggaacagga
gatgagcccaagactacagtggaactttctgaagatgagacccagtatgctatgaacaac
ttaagacccgatacagagtatgaggttattttgatatctcgacgtggagaaatgaccagt
tctccaatttccgaaacctttacaacagatttagacacacccaaaaatttgagaaaagtg
tcacagacagatagcacaattactctggaatggaagaataccttggccaacattgacttc
tttaggatcaagtttgccacactatctggaggagatcatgaagagataactgtacccaag
agtaaccaggctaccactaaggctatccttacagggttgagaccaggaactgaatatggc
atagggctaacagcagtaaaacaggacaaagaaagttctcctgctaccatcaatgcagca
actgacttggatgcccccaaagacttgaaggtttctgatgctaccgagactacattaaat
gtacaatgggtcaaacctatagccaagtttgatcgctaccaacttacatacatcaccagt
gatgattctcaaactgaagtccaggttcctggagatgccagttcctatgtagtaactggg
cttgaacctggtaaagaatacagcatttcactggttgcagagaaaggcagacacaagagc
aagccagcaactgtacttgggcgtactgaagttccacgggagctgggcaacctattaata
tcccatgtaaactgggactccttcaaactcacgtgggcagctccagacaacaactatgag
aaatttgtcattcaggttcaggacactgcagaagaagaaaatatacaaaccattttggtc
cctggagaacttcgctctttggaagtgccgggtctgaaaccggcctcaaaatatctcatc
actctgtatggtgtgattcagggatctaaaactaagcctctctttggtgaagctgtcaca
gaaaacaagccagaagttgacaacttgtccatcaccaatgtaacaccaaagagctttgac
ttgtcttggacagcaacacaagatgattttaatcgatttgttatagaaatcgttgataca
gaaaagttattggagccagtgaaattaaatgtctctggcaatctcaggaatatttctgtc
tcagggttattacccaacactgattacaccatctacctctatggcattgtccgtgatcaa
cctacacaacctattagcacttcagcttctacagagacggaacctgaagttggaaacctg
gtggtttccaaaattactccgcacagtctttacctgtcctggacagctgacgaaagtggt
tttgacaactttatcattaaaatgcaagataccaataagcagtttgaaccaattacactt
acagtaccaggcagtgaacgttcaacagttgtgacaggactaacagatggcactgaatat
gaaattgagctgcatggcgtctctagcggtcagcactctccatcaattgaaggagaggca
acaacagccatggggtctccaaaaggactttccttctccgacattactgagaactctgct
aaagtcatctggctagcaccgaagatccgtgttaacaaattcctgataacttatgttcct
gtgactggaggtgccagcagcacagtggaagtggatggttctagaacccaaacaacttta
gctaacctcctgccaggtgttgagtaccgtgtaagtcttgtgtctgtgaaaggcagtgaa
gaaagtgctccagcctctgataccctgacaacagctcttgacagtccatcaggtctaaga
gtcatcaatgtcacggattctgaagctctggcactgtggaaaccatctttggcatcggtg
gataattatgttatctcttactctgcaaagaatgctccagctgtagaggttacagtctca
ggcaacactgtcgaaaatgatattatcgggcttcaaccatccactgaatacaaattaaaa
atctatgctgttagaggaccacttagaagtcaggaaatatctactatattcaccacagct
ttggatgcccctagagatttaacagcaagtgaaattcagtcagaatctgctctgattaca
tggagaccaccaagatcaataatcacaggtttcttgctcatctatgagtctgtggatgga
acggtcaaggaagtagctttgggacctgatgccacctcttacagagtgccagatctcagt
ccctcatctcagtatacagtaagacttcaggcaattaatggaaactttaagagcaaattc
atccaaactatatttacaacaactggacttctatatccgctccccagagactgttctcaa
gctattctaaatggagagacagaatcaggaatgtacacaatttatgccaatggtgaccaa
tcacaacctatggaagtattttgtgacatggagattgataacggtggatggattgtgttt
ttgagaagaactgatgggtctgaagatttttacagaaattggagagcttacagtgctgga
tttggagatcccaataatgaatttttcttaggtctggagaatttgcacaaaattacatcc
cagggtcaatatgagttgcgtgttgacctcaaagaccgaggtgaaacagtttatgctgtt
tacgataaatttggagttggcgattccaagagcagatacagactaaaggttgatggttac
tctggtacagcaggagattcaatgacttatcacaatggacgctcgttttccacctacgac
aaggacaatgattccgccattaccaattgtgctctgtcttataagggagctttctggtac
aagaattgtcacagagtaaacctcatgggtagatatggtgacaacagccacagtcaggga
gtcaactggttccactggaagggtcatgaacactcccttgagtttgcagaaatgaaaata
agaccagtcagtttccgaaatcttgaaggaagacgaaagagatcataa
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integrated database retrieval system
