Bufo bufo (common toad): 120978894
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Entry
120978894 CDS
T07950
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120978894 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120978894 (SMG7)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120978894 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
120978894 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
120978894
NCBI-ProteinID:
XP_040263237
LinkDB
All DBs
Position
9:189615140..189670131
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AA seq
1192 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTESKPGTAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHCGTVVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESREEM
KKRWSVSDFIKAFIKFHGHVYLAKNLDRVSHLREQLEEQFKSMVFQKVFNSQQLVHITVI
NLFQLHHLRNFGIEAEQQSFSQDEDLCWSQLLALFMSFLGTLCRSPSKTRHCDETSCADP
LPAIKVSLDWMKLRPTVFQETAMEERQYVWPWLISLLNSFRVLEEDLTSTNLLPLPEEFE
LQGFLALRPAFRNLDFSRGHQAIIGDRETRHRRLRAIRLVSLGKWISENQPRLLQYRTVQ
GEVSFFTDIPEVMIEDPDDAEDLSSPLETRQADTQKTELSPGLKSVLSTGRSPNGDTSEK
PVVTFKENIKPQEVNRDVPARSYTRTANAGKELRDFNKGINATSNKKDNNGKRKNEPKKA
GADKVQESGKQSIAVQVKTSVSEARKTPVTPTSSPNTNTQFIPIHHPGAFPPLPSRPGFP
PPAYVIPPVAFSMSSGYTFPPGVNVPGSFLQPSSHSAAGSQGPPGKQSHIPYSQQRPSGP
GTPVQGALGNHLPGQSQPQAPSSSPTQQSTPTSAQLQIQVMAQQHSPTKPIQSLGKNPQL
HPSLQQYQQTVDASKQLWNSPQVPNSLGKLLPPMKQNYFMDGRLPSEPLSMLEQCLQHPI
MQQPLEKKMKSFPVDAYNQNTSEMKMSDFYWGDQTSYNLNDNRALLAQQSINNQRSKRQP
AGYRSGQDSIARLPFEEPKRSPLLPPDLLKSLAALEEEEELAFSPPPDLYPALLGPLATL
PGRSLFKSLLEKPSELISQPPSFLSLTGFSLSQQERFPSNSVFNDVYSKSSCGSTKSEVC
HPIGQQETSLYSLFEGKPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTTNHTAQPFS
NFGPIGTPDNRDRRCADRWKTDKPAMGGFGLDYLSVTSSSENSWRQINNSSSANAWAAQS
NAREDSSAALMESLKSIWSTTMMHPGPSALEQLLMQQKEKQQRGQGSLNPPH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgtgcgcagtatctccggcaggccgaagtcctgaaagcagatatgaca
gaatccaagcctggcacagcagaggtgtggacatcgcgtcaagctctacaggacttgtac
cagaagatgctcgtcacagacctggagtatgcactggacaagaaggtggagcaagacctc
tggaatcatgccttcaagaaccagattacaacgctgcagggtcaggcgaaaaaccgggcg
aatccgaatcgcagtgaggtgcaggctaatctgtcattattcctagaggcagctagtgga
ttctatacacagcttttgcaggagttatgcactgtgtttaatgtggatttaccatgccga
gtgaagtcctctcagctggggattatcagcaataagcagatgcactgtgggaccgtggtg
aaacctcaatccagttcctgctcctatatctgccagcactgcttggttcaccttggagat
attgctcgctacagaaatcagacaagccaagctgaatcatattacagacatgctgctcaa
cttgtcccttccaatggtcagccatataatcagctggctatccttgcctcttcgaagggg
gatcatttgaccactattttttactactgccgcagcatcgctgttaagtttcctttccca
gcagcctccacaaacctgcagaaggctctttccaaagcactggagagtcgcgaggagatg
aaaaaacgatggagtgtctcagattttatcaaggccttcattaagttccacggacatgtt
tatttagcaaaaaatttggacagagtgagccatctgcgagagcaactggaggagcaattc
aagagtatggtatttcaaaaagtcttcaattcccagcagttggttcatatcacagtgatc
aacctgtttcagctgcaccacctgcggaatttcggtattgaggccgagcaacagagcttt
agccaagatgaggacctgtgctggtctcagctgctggctctcttcatgtcgttccttggc
accctttgcagaagtccctccaagacccgtcactgtgatgaaacatcctgtgccgatcca
cttcctgctatcaaggtgtctctcgactggatgaagctgcgtcccactgtatttcaggag
accgctatggaggaaagacaatatgtttggccatggctgatttccctgttaaacagtttt
cgtgtactagaggaagacctgaccagtaccaacttgttgccgcttccagaggagtttgag
cttcaggggtttctggctcttcgaccagcattcagaaaccttgacttctctagaggccac
caagctattatcggagaccgggaaactcggcaccgccgactgcgagccattcgccttgtc
tcattaggaaagtggatatctgaaaaccagccgaggctgttgcagtaccgtactgtgcaa
ggtgaagtttccttcttcacagatattcctgaagtcatgattgaagatccagatgatgct
gaagacttgtcttcgccactggagactaggcaggcagacactcagaaaaccgagctaagt
cccggtttgaaatctgtactttccactgggcgcagccccaacggtgacacttctgaaaag
cctgtggttacttttaaagagaacattaaaccccaggaggtaaaccgtgatgtgccagct
cggagttatacaagaacagccaatgctggtaaagaactgagagactttaataaagggatt
aatgctacctctaacaagaaggataataacggcaaacgaaagaatgaacccaagaaggct
ggtgctgacaaggtgcaggaatcgggaaaacagagcattgctgtgcaggtgaaaacgtca
gtctctgaggcaagaaaaacaccagtgaccccgacatctagtccaaacaccaacacacag
ttcatacctatccaccatcctggtgctttcccacctttgcctagtcgaccaggatttccc
cctcctgcctatgtcatcccacctgtggcattctcaatgagttctgggtatacctttcct
cctggagtcaatgttcctggatctttcctgcagccttcatctcattctgctgctgggagt
caggggcctccaggtaaacagtcccacattccttacagccagcagcggccttcaggccca
gggacgccagtccaaggagctcttggtaaccatctgcctggccagtcacagccacaagct
ccgtctagttctccaactcaacaaagcacaccgacatcagcacagctgcagattcaagtg
atggcgcagcaacattcacccactaaacctatacagtctcttggaaagaacccccagctc
cacccttctctccagcagtaccagcagactgtagacgcctctaagcagttatggaactct
cctcaagtcccaaactcgctcggaaagctactaccaccaatgaagcaaaactatttcatg
gacggtcgtctgccaagtgaacctctgagcatgttggagcagtgcctacagcatccaatc
atgcagcagcccctggagaagaagatgaagtctttcccagtggatgcctacaatcagaac
acttctgagatgaagatgtccgacttctactggggggaccaaacatcttacaacctaaat
gacaacagagccctgttggcacagcagtccattaataaccaacggagcaagcgccaacca
gctggctatcggtcagggcaggattcaattgcaagattaccattcgaggaacccaagcgt
tcccctctccttcccccggacctgttaaagagtctggctgctctagaggaggaggaagag
ctggctttctcccctcctcctgatctttacccagctctgctcggccctctggccacactc
cctggacgaagcctctttaagtctcttctggaaaagccatctgagctgatatcccagccc
ccctctttcctctcactcactggattttcactgagccagcaggaaaggttcccgagtaac
agcgtcttcaatgatgtgtacagcaagtcgtcctgcggtagcacgaaatcggaagtgtgc
catccaatcggacagcaggagacctctctttattctctgtttgagggcaaaccttggtct
ccatctcttccagcaagctcggaccattctacaccagccagtcagtcacctcattcatca
aacccgagcagcttaccaagctctccacccaccacaaaccatacagcccagcccttctcc
aacttcgggcctataggaaccccagacaaccgtgatcggcgttgtgctgaccgatggaag
actgacaagccagctatgggtggctttggtctggattacctgtctgtgacctcatcatcc
gagaacagctggcgccagataaataattccagcagtgcgaatgcttgggcagctcaaagc
aacgcaagagaggactcttcagctgctctgatggagagcttgaagtctatttggtcaacc
acaatgatgcaccctggcccatcagccctggagcagctcctgatgcagcagaaggagaag
cagcagagaggacagggatcactcaatcctccgcactga
DBGET
integrated database retrieval system
