Bufo bufo (common toad): 120979041
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Entry
120979041 CDS
T07950
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120979041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbuf03009
]
120979041
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
Pre-60S particles
RNases
120979041
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
120979041
NCBI-ProteinID:
XP_040263493
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Position
9:12287554..12291268
Genome browser
AA seq
1141 aa
AA seq
DB search
MMLKNTGYFRAIECPFSDSCLRPHCLFKHGGRVGSGRARNDAEYEPPELSVVPPSMDEAR
NKHVLELERVNRAIEEVKSQVEREQRKYQELLETQKGPSKSLQPGGPSVCEYDPGCSGSR
AACYSPTPLEPPAKPCKYTLEPARHDGRKRQYLEYVPKAVAPAPGRRPHKYVIDHSKPST
DLEYDPMVNYSARLLSKKKPEKETKRSRTHSQGEDQTASKRSRTHSQGEDQTASKRSRTH
SQGEDQTASTERSTYSPSEGQTASKRSRTHSQGEGQIASTERSRTYSPGEGHTASSKRSR
MSKIMVEAKCSSDSDSPSPDVNEGGDLVAQYDVDDAGNSLKSFKKLDKDLKPKSGKSERI
KEPPLDSGQVMRTSKESKKVSSKHLKKNTEQVHNVHKQKKQEKPSEKTENEKTVFPKTPI
LRKNKKDNENVSKKKSSKKDSMGKKGDLKNGKHSTKHGKSLPLEKLKRAAQETCKVDSNM
KSLCHADLFGDDTSDEEENRKTSKPRNATSNKWEKSAAKSKVTTRTTSVSSLDSPEIDLD
WDSDPDPMEECLRVFNESHDVKTEDKGRMGKKTSENEEKSQLSLVPSVTGQKKRISHVTN
ANNGDSSRKPAARPYSLLTPQEICYERIQRAQEQAAQLLREQKSALLVSIAHKIHSEKTL
SKTSAPRSPGVCEKKAQLPGTAETCNGSSLAVKSRTLSGMASKTSSATRERRRAHVPSLQ
SAALKRPVLPTEFGAKVPTTVRQRYLNLFIDECLVSCPSQEEAFNKALEEEKMVYSRSSS
RNIYLNVAVNTLKKLRSQGSEKKATYPKGNQKTVSHEAVLAGKLAANSSFSARIRQDEEL
TEATIYKNLMKYILTPEQLKEHGYPLAHPDKSGRAVVFSGEEIKNSDSSCKVCCRCGAEY
LVTPSGKCVRREECNFHWGRLRRQRGPGGLETFYNCCSGAVGSVGCQVAQQHVPDGRKEN
LDGFVKTFEKLNRLEGNHGVFALDCEMCYTTRGLELTRVTVVNSQLKVVYDTFVKPDNKI
VDYNTRFSGVTEEDLQNTSITMRDVQAVLLCMFSSDSILIGHSLESDLFALKLIHQTVVD
TAVVFPHRLGLPYKRALRTLMGEYLKRIIQDSVEGHDSSEDACSCMELMIWRLKEDAKLK
R
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaagaacaccggttacttccgagcgatagagtgtccgttcagcgatagctgc
ctgcggccgcactgtctcttcaagcatggcggaagagtcgggagcggcagggcccgaaat
gatgcggagtacgagcctccggagctttctgttgttccaccttccatggacgaggccaga
aacaaacatgtcctggagctggagagagtgaaccgagcgatcgaggaggtgaagagtcag
gtggagagagagcagaggaaataccaggagctgctggagacgcagaagggcccctccaag
agtctgcagcctgggggccccagtgtgtgtgaatatgacccggggtgttcgggcagcaga
gccgcatgttacagcccgacccccctggagccgccagcaaagccctgcaaatacacctta
gagcctgcacgacatgatgggcgcaagagacagtatctggagtatgttcccaaagccgtg
gccccggctcctggacgcaggccccacaaatacgtcatcgatcattccaaaccttccaca
gacctggagtatgaccccatggtgaactactctgccaggctcctcagcaagaagaaacct
gagaaggagaccaaaagaagccggacccatagtcaaggagaagaccagacggcctctaaa
agaagccggacccatagtcaaggagaagaccagacggcctctaaaagaagccggacccat
agtcaaggagaagaccagacagcctctactgaaagaagtacatatagtccaagtgaaggc
caaacagcctctaaaagaagtagaacccatagtcaaggtgaaggccaaatagcttctact
gaaagaagcaggacctatagtccaggtgaaggccatactgcctcttctaaaaggagtaga
atgtctaagataatggtggaagctaaatgttcttctgactcggattctccatctccagat
gtaaatgaaggaggagaccttgttgcacagtacgatgttgacgatgctggaaactcctta
aagtcctttaaaaaactagacaaagatctaaagccaaaatccgggaagagcgagcgtata
aaagagccaccattggactccggacaggtgatgcgcacaagtaaagaatccaaaaaagtg
tcttcaaaacacctcaagaaaaatactgaacaggttcacaatgtgcacaagcagaaaaaa
caagagaaaccgtctgaaaaaactgaaaatgaaaagacggtttttccaaaaactccaata
ttgagaaaaaacaaaaaggataatgaaaacgtgtccaagaaaaagtccagcaagaaagac
tcaatgggtaaaaaaggagatcttaagaatggaaaacatagcaccaaacatggtaaatcg
ttgcctttggagaaactcaagcgagccgcccaagagacttgcaaagtggattccaatatg
aaaagtttgtgtcatgcggatttgtttggcgatgatacaagtgatgaagaagagaacaga
aaaaccagtaaaccacggaacgcaacgtctaacaagtgggagaagtctgcagcgaagagt
aaagtgaccacaagaacaacgtccgtctcctctctggattctcctgagatagatctggac
tgggactctgatccagaccccatggaagagtgtctcagagttttcaatgaatcgcatgac
gtgaagactgaagacaaggggagaatggggaagaagacgagtgagaatgaggagaaatcg
cagctgagtttggttccatcagttacaggccagaagaaaagaatttctcatgttactaat
gcaaataatggggattcatctagaaaacctgccgcccgtccgtacagtctccttacccct
caggagatttgttacgagagaattcagagggcccaggaacaagccgcccaactgctgcgt
gaacagaaaagcgctctcttggtcagtattgctcataaaatccattccgagaaaacgcta
tccaaaacgtccgctcctcgttctcctggtgtttgtgaaaaaaaggcccaactgccgggc
actgctgagacttgtaatggctcctcacttgccgtaaaatcgcgaacactgtccggcatg
gcttcaaagaccagttctgcaaccagagaacgtcgacgggcacatgtaccctcgcttcag
agtgccgccctgaagaggccggtcttgcctactgaattcggtgccaaagtgccaaccacc
gttcgtcagcgttacctgaacctgttcattgacgagtgcctggtgtcctgtccgtcacaa
gaggaagcctttaacaaagctctcgaagaggaaaaaatggtctatagccgaagcagcagt
cgtaacatctatctcaatgtggcagtcaacactctgaagaaactcagaagccaaggctcc
gagaagaaagcgacttatccaaaaggtaatcagaaaaccgtttcccacgaggctgtcctg
gctggaaagttggcagccaatagcagtttttcagccagaattcgtcaggacgaagaactg
acggaggcaacaatatacaaaaatctgatgaaatatatcctgacacccgagcaactgaag
gagcacggctacccactggcgcaccccgacaagtctggaagggctgtcgtcttttctgga
gaggaaatcaagaactcagactcctcctgcaaagtatgctgccgatgtggcgccgagtac
ctggtgacgccgagtggaaaatgtgtgcgccgagaagagtgcaatttccattggggtcgt
ctccgcaggcagagagggcctggaggattagagaccttttataactgctgctcgggtgcc
gttggctcggttggatgtcaagtagctcagcaacatgttccagatggtcgtaaggagaac
ttggatggctttgtgaagacttttgagaagttgaatagactcgaaggaaatcatggagtc
tttgctttagactgtgaaatgtgttacactacaaggggcctggagctgacccgtgttacc
gtcgtaaactctcagctgaaggtggtgtatgacactttcgtaaaaccggacaataagatt
gtggactacaatacgaggttttctggcgtcacagaagaggatctgcagaacaccagcatc
accatgagagatgtccaggcggtcttactgtgcatgttcagcagtgactccatattaatt
ggccatagcttggaaagcgacctttttgcactgaagcttattcaccagactgtagtggac
acagcggtcgtcttccctcaccgccttgggttgccatacaagcgcgcccttcgtacgtta
atgggtgaatatcttaagcgtattatccaggacagtgtggagggacatgactccagtgag
gatgcctgctcatgtatggaactgatgatttggcgtctaaaagaagatgctaaattaaaa
cggtaa
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