Bufo bufo (common toad): 120979608
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Entry
120979608 CDS
T07950
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120979608 (DDX17)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120979608 (DDX17)
Spliceosome [BR:
bbuf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120979608 (DDX17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Ferritin
Motif
Other DBs
NCBI-GeneID:
120979608
NCBI-ProteinID:
XP_040264401
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Position
9:156378729..156403575
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AA seq
602 aa
AA seq
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MRGSFMDRDRGGAGGSRFPKFGNPGERLRKKRWDLNELPKFEKNFYTEHPEVAHMSIHDV
EELRRKKEITVRGINCPKPVYTFQQSNFPQYVMDVLIDQRFKEPTPIQCQGFPLALSGRD
MVGIAQTGSGKTLAYLLPAMVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADEYGKS
SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRM
LDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQINVGNLELSANHNI
LQIVDVCQESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHG
DKSQQERDWVLNEFRSGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTA
RSTNKGTAYTFFTPGNLKQARELVKVLQEANQTINPKLMQLVDHGRGGGGGGGRSRYRSI
PTNNNPNMMYQEECDRRMRGKDGGRRDGRNNRDGIASNGTGSRQGFGYAGQNSNFQPSQY
GYGQGAFTAGAASSYGAAAYGQAPQPLMSQQFAPPATPLLNYMNQAASYQYPPPPPPPPA
RK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaagctttatggatcgtgaccgaggcggggctggtggctctcgcttcccaaaa
tttggtaacccaggagaacgcctccgcaagaagcgctgggatttaaatgagcttccaaaa
tttgagaagaacttttacactgagcatccagaagtagctcacatgtcaatacatgacgtt
gaagaactgcgcagaaagaaagagattactgtccgtgggatcaactgcccgaaacctgtc
tatactttccaacagtcaaactttcctcagtatgttatggatgttcttattgatcaacga
tttaaggaaccaaccccaatccaatgtcaggggtttcctcttgcgttgagtggtcgagac
atggtgggaattgcccagaccggatctggcaaaacacttgcgtatcttctgcctgcaatg
gtgcacatcaaccaccagccttatctggagcgaggagatggaccaatttgtttggttctt
gctccaacccgagaattagctcagcaagtacagcaagtagccgatgaatatggaaagtca
tctcggctgaagagtacatgcatttatggtggcgctcctaagggtccacagatacgtgat
cttgaaagaggtgtggagatttgcattgccactccaggcaggctcattgactttctggag
gtcgggaaaactaatttaagacgctgtacctacctcgtgctggatgaagctgacagaatg
cttgacatgggttttgagccacagatccgcaagattgtggaccaaatcaggcctgacaga
caaactctaatgtggagtgccacgtggccaaaagaggtgcgccaactagctgaggacttt
ttgagagattatgtgcagatcaacgtgggcaatttggagctgtctgccaatcataatatc
ctacagatcgttgatgtttgccaggagagtgagaaggaccacaaacttatccagctaatg
gaagaaataatggcagaaaaagaaaacaaaaccattatttttgtggaaactaaacgtcgc
tgtgatgatcttactcgcagaatgaggcgtgatgggtggccggccatgtgtatccatggt
gacaagagtcagcaggagagagactgggtcttaaatgaatttcgctctggaaaagcacca
attctaatcgctacagatgttgcttcgcgaggtctagacgtggaagatatcaagttcgtc
attaactatgattacccaaatagctcagaggattacgtgcaccgtattggccgcacagcc
cgtagtacaaataaaggcacagcgtacactttcttcactcctggaaaccttaaacaagct
cgtgagctggtgaaggtgcttcaagaagctaaccagactatcaatccaaaactcatgcag
ctggtagatcatggccgtgggggtggtggtggaggtggccgatctaggtaccgcagcatt
ccaaccaacaataacccaaacatgatgtatcaagaagagtgcgacaggagaatgcgtggc
aaagatggtggtagacgtgacggacggaataaccgtgatggaattgccagcaatggaact
ggaagtcgtcagggatttggttatgcagggcagaattcaaacttccagcctagccagtat
ggatacgggcagggcgcatttacagcaggggcagctagcagctatggtgcagcagcatat
ggccaagcaccacagccgctgatgtcccagcagttcgccccgcctgctactcctttgttg
aactatatgaatcaagcagctagttatcagtacccacccccacctccaccaccacctgct
cgaaagtga
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