Bufo bufo (common toad): 120979995
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Entry
120979995 CDS
T07950
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04137
Mitophagy - animal
bbuf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120979995 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120979995 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
120979995 (AMFR)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120979995 (AMFR)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120979995 (AMFR)
Multi subunit type E3
ERAD complex
120979995 (AMFR)
LMBR1L-GP78-UBAC2 complex
120979995 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
zf-C3HC4
CUE
zf-RING_11
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
FANCL_C
BID
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120979995
NCBI-ProteinID:
XP_040264791
LinkDB
All DBs
Position
10:complement(104771420..104822257)
Genome browser
AA seq
631 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLLLSLSLLSAYRSLSRELDEEEGRGEAEERGGQLSGDA
REVAVELGRYLVSDSLGVWVLVNTVCCLLMLVAKLIQHVVFGPLRVSERQHLKDKFWNFI
FYKFIFIFGVLNVQTVEEVVLWFLWFAGLVFLHLMVQLCRDRFEYLSFSPTTPMSCHIRV
LVLLSAMLGVCCCLGVLCVFAGYVHGIHTLAFMAAECLLVTTRTAHVVLRYVIHLWDLNH
EGTWEGKGTYVYYTDFVMELSHLSMDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHELQ
RRLRRHKNYLRVVGNMEAHFAVATAEELEANNDDCAICWDSMQAARKLPCGHLFHNSCLR
SWLEQDTSCPTCRMSLNMADGTRPRGAQPRDNIDQNMIPLTVTEVRPRLNQHNHFFHFDG
SRFASWLPSFSVEVMHTTNIIGIAQASNSQLNAMAQQVLGMFPQVPYHLVLQDLQITRSV
EITTDNILEGRILVPFPTQRSDEPRSDGSSEANEQQESNRDVQTERVSLNLTPSMEEYGD
FIEAEVQPTDAEDFEARGSRFSKSAEERQRMLSQRKEDVVQLARRRYLNRTSDDGPSTSS
ENEVSDSVALRRRMMAAAAERRIQLQQPPQE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctcttcctggagcgcttcccgtggcccagcctgcggacatacaccggcctg
agtggcctactgctgagcctcagcctgctgagcgcctaccggagcctgagccgggagctg
gacgaggaggaaggccgcggggaggcggaggagcgcggcgggcagctgtcaggagacgcg
cgggaggtggcggtggagctaggccggtacctggtgtcagacagcctgggagtgtgggtc
ctggtgaatactgtgtgctgcttgctgatgcttgtggctaaattgattcaacatgtggtg
tttgggccgctgcgagtcagcgagaggcagcatctcaaggacaagttttggaattttatc
ttttacaagttcatcttcatctttggcgtcttgaacgtgcagactgtggaagaggttgtc
ctgtggttcttgtggtttgcaggcttggtcttcctccatctcatggtccagctgtgccga
gacagatttgaatatctgtcattctcgcccaccaccccaatgagctgccacatccgtgtg
ttagttcttctctctgccatgcttggggtgtgctgctgcttgggtgtgctgtgtgttttt
gctggatatgtacatgggattcacacgctggcgttcatggctgctgagtgtttgctggtg
accacaagaacagcccatgttgtgttacgctatgtgattcacctgtgggaccttaatcat
gagggaacgtgggaaggcaaagggacttatgtatattatacagattttgtgatggagctc
agtcacctttccatggacctgatgcatcatattcacatgttgctatttggcaacatttgg
ctttccatggcaagcctggtcatcttcatgcaactgcgtcaccttttccatgaactgcag
cgcagactccgccggcacaaaaattatttgcgggttgttgggaacatggaggctcacttt
gcagtagccactgctgaggagctggaggccaataacgatgactgcgccatctgctgggat
tcaatgcaagctgcacgcaagctaccctgtgggcatctgtttcacaactcatgcctccgc
tcttggctggaacaggacacttcatgtcccacttgtagaatgtctctcaatatggctgat
ggcaccagacctcgtggagcacagccgagagacaacatagatcaaaatatgatcccccta
accgtgacagaggtgcgaccccgcctcaatcagcacaatcacttcttccattttgatggt
tcaaggtttgcaagttggctgccaagtttctcagttgaagtgatgcacacaacaaatatc
atcggaattgctcaagcaagtaactctcagctaaatgccatggcccagcaggttttaggc
atgtttcctcaagtaccttatcacctggtcttgcaggatctgcagattactcgctctgtg
gagatcactacggacaatattttagagggacgcattctagtgccttttcccacacagagg
tctgatgagcccagatcggacgggtcttctgaagctaatgagcaacaagaaagtaataga
gatgtccagaccgagcgagtttcattgaacttgaccccaagtatggaggaatacggagac
ttcattgaagcagaggtacagcccactgatgcagaagactttgaggccagaggcagccgg
ttctccaaatctgcagaagagaggcaacgaatgctaagccaaaggaaggaggacgtggtg
cagctggcaagaaggcgctatctcaacagaacttcagacgatggtccttctacgtcctca
gaaaacgaggtttcggactctgttgccctccgccggcgtatgatggcagccgctgccgag
cgcaggattcagctgcagcagccgcctcaggaatga
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