Bufo bufo (common toad): 120980725
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Entry
120980725 CDS
T07950
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbuf04812
]
120980725 (KATNB1)
Cytoskeleton proteins [BR:
bbuf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120980725 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
WDR54
Beta-prop_IP5PC_F
Beta-prop_DCAF12
eIF2A
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
PD40
Motif
Other DBs
NCBI-GeneID:
120980725
NCBI-ProteinID:
XP_040265917
LinkDB
All DBs
Position
10:144855996..144882787
Genome browser
AA seq
657 aa
AA seq
DB search
MNMATSGMTKTSWKLQEIVAHASNVSALALGKSSGRLVATGGEDCRVNIWSVNKPNCIMS
LTGHTSPVESVRFSTSEKLIVAGSQSGSLRVWNMEEAKIQRTLMGHKANVCSLDFHPYGE
FVASGSLDTNIKLWDIRRKGCVFRYKGHTQAVRCLRFSPDGKWLASSSDDHTVKLWDLSA
GKLMAEFVEHTGPVQIVEFHPNEYLLASASGDRTVRFWDLEKFQSVGCMEGEATPFRSIL
FSSDGGCLFCGGREALRVYGWEPERCFDTVPVAWGKVSDLSICSNQLIGVSCSQSNVSSF
VVDLNRVKMTGSGTVGALPKESPVTQPAPTGSSLRRNYERPSTTCTKPKRVSPTSDDEEK
ESRAEIQNAEDYKELFQPKNAISRTPPRNSEPFPAPPEDDATTVREAVPAAPEAATPAPP
TKKNCEQLHRLPVAASTPTVCPDPPVTPAVSSSPPVISAARNEPIGLKVADFLPVVKGSP
PAEIVDDDAVCQIRKGHDTMCMVLTSRMRNLDTVRAVWSTGDVKTSMDSAVAVNDLSVVV
DLLNIINQKASLWKLDLCLTVLPQIDKLLQSKYESYMQTGCVSLKLLLQRFLPLITDTLS
APPSVGVDISREERLMKCKLCYKQLKSLHTLVKSRAPQSGRYGSAFLELQLLMSGLE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggcgacttctgggatgacaaagacatcgtggaagctgcaggaaatagtggct
cacgccagcaatgtgtcggcactcgcccttgggaaaagctccgggcgtctcgtggccacc
ggtggagaagactgccgtgtcaatatctggtctgtcaacaaaccaaactgcatcatgagt
ttgactggacacacgtccccggtggagagcgtccgattcagcacatccgagaaactcatt
gtggccggatctcagtcaggttctctgcgcgtgtggaacatggaagaagctaaaatacag
aggacgctgatgggacacaaggccaacgtgtgcagtctggatttccacccgtatggagag
tttgtggcttcgggatctctggacacgaacattaagctctgggacatacgcaggaagggg
tgtgtgtttcgttacaaggggcacacacaagccgtacgctgcctacgcttcagtccagac
ggcaagtggctggcgtcgtcttcagatgaccacactgtaaagctctgggatctgagtgct
gggaagttgatggcggagttcgtagagcacacaggacccgtgcagattgtggaatttcac
cccaatgaatatttgctggcttcagcgagtggagaccggacagttcgtttctgggatctg
gagaagttccagtcggtgggctgcatggagggagaagccactccattcaggtccatcctg
ttcagcagtgacggtggctgtctgttctgcggaggccgggaagctctgcgtgtttatggc
tgggaaccagagcgctgctttgatactgtccctgtggcttggggcaaggtctctgatctg
tccatctgcagcaaccagctgatcggggtctcctgctcacagtccaatgtctcgtctttt
gtggttgacctaaatcgtgtgaaaatgactggatcggggacagtgggggcacttccgaaa
gaatcaccggtcactcagcctgctccaacaggctcgtccttgagacgtaactacgagcgt
ccgtctaccacctgcacaaagccaaagagggtcagcccaaccagtgatgatgaggagaag
gagtccagagccgagatccaaaacgcagaggattacaaagagctctttcagcctaagaac
gccatctctcggactcccccacggaacagcgagcctttcccagcccccccagaggatgat
gccaccacggtgagagaagccgtgcccgcagccccagaggccgccacgcctgctcccccc
accaagaagaattgtgaacagctccacaggctgcccgttgcagcttctacacccactgtg
tgcccggaccctccagttactccagccgtgtccagtagccccccggttatatctgcagca
cgaaatgaacccattgggcttaaggttgcagactttctcccagtagtgaagggctcgccc
ccagcagagattgtggatgacgacgctgtatgtcagattcggaaaggccacgacactatg
tgcatggtactgaccagcagaatgaggaacctggatactgtgagggcggtgtggagcacg
ggggacgtcaagacctccatggactccgctgtggctgtgaatgatctctcggtggttgtg
gatctcctaaacatcatcaaccagaaagcgtctctctggaagctggatctctgcctgacc
gtgctgcctcaaatcgacaaactgctgcagagcaagtatgagagctacatgcagacggga
tgcgtctccctcaagcttctcctccagaggttcttgccgctgatcacggacacgctctca
gcccccccctctgtgggtgtggacatttcacgggaggaaaggctgatgaagtgtaagctc
tgctacaagcagctgaagagcctccacacgctggtaaagagcagagcgccgcagagtgga
cgatacggcagcgccttcctggagctccagcttctcatgtctggcctggaatga
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