Bufo bufo (common toad): 120980874
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Entry
120980874 CDS
T07950
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120980874 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120980874 (SF3B3)
03041 Spliceosome [BR:
bbuf03041
]
120980874 (SF3B3)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120980874 (SF3B3)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120980874 (SF3B3)
Spliceosome [BR:
bbuf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120980874 (SF3B3)
Complex B
120980874 (SF3B3)
Complex C
U2 SnRNP specific factors
120980874 (SF3B3)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
120980874 (SF3B3)
TFTC complex
120980874 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
120980874
NCBI-ProteinID:
XP_040266164
LinkDB
All DBs
Position
10:complement(145492938..145511206)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVATAMSVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGLVYTYKLVNNGEKLEFVHKTPVEEVPAAIAPFQGRIL
IGVGKLLRIYDLGKKKLLRKCENKHIANFIVGIQTIGQRIIVSDVQESFIWVRYKRNENQ
LVIFADDTYPRWVTHSSLLDYETVAGADKFGNICVIRLPQNINDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHMRSEHPPICGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPIKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcaccctgcagagggcgactggcatcagctttgccatccatgga
aacttctcaggaacgaaactccaggagattgttgtttcccgagggaagatcttggagctg
ctgcgccctgatgccaacacgggtaaagtgcacacgctactgacggtggaggtgtttggc
atcatccgctccctcatggctttccgtctgactggtggcaccaaggattacattgtggtg
ggcagcgactccggccgcatcatcatcctggagtaccacccatccaagaacatgtttgag
aagatccatcaggagacgtttggaaagagtggctgccgcaggattgtgcccgggcagttc
ttggctgtggaccctaagggcagagctgtgatgataagtgccatagagaagcagaagctg
gtgtacatcctgaacagagatgccgctgcccggctcaccatctcctctccactggaggct
cacaaggccaacaccctggtgtaccacgtggtgggggtggacgtaggctttgagaacccc
atgtttgcttgcctggagatggattatgaggaagctgataatgatcctaccggggaagcg
gctgctaacacccagcagacactgaccttctacgagctggacctcggtctgaaccacgtc
gttcgcaagtacagtgaacccttggaggagcacggcaacttcttaattacagttcccgga
ggctcggatggccccagcggggtgctgatttgttctgaaaactacattacatacaagaac
tttggcgatcagccggacatccgctgtcccatcccgaggaggaggaacgacctggacgac
ccagagcgagggatgatattcgtctgctcagctacacataaaaccaagtccatgtttttc
ttcctggcccagacggagcagggcgacatcttcaagatcacgctggagacggacgaggac
atggttactgaaatccgcctgaagtactttgatactgtcccagtggccacggcaatgagc
gtcttgaagactggcttcctctttgtggcttcagagtttgggaaccattacctgtatcag
atcgctcatctgggtgatgatgatgaggagccggagttctcctccgccatgcccctagag
gaaggagatacgttcttctttcagcctcgtcctctaaagaacctggtgctggtggatgag
caggacagtctgtcccccatcatgtcctgccagattgctgacttggccaatgaagacact
cctcagttgtacgtggcttctggacggggtccccgctcttctctcagggtcctgaggcac
gggctcgaggtctctgaaatggctgtctcagagctgcccggtaaccccaatgccgtgtgg
accgtgaggcgacacattgaagaggagtatgactcgtacatcatcgtgtccttcgtgaac
gccaccctggtactctctattggtgagactgtagaagaagtgacagattctgggtttctg
gggacaaccccaaccctgtcctgttctctgttgggagaagacgccttggtccaggtctat
cctgatggaatccggcacattcgagcagacaagagagtcaatgagtggaagactccgggg
aagaagataatagtgaagtgtgcggtgaaccagcggcaggtggtgatcgctctgaccggg
ggcgagctggtctactttgagatggacccttcagggcagctaaacgagtacactgagagg
aaggaaatgtccgcggatgtcgtgtgcatgagcctggccaacgtgccgccaggggagcag
cggtcacgcttcctggcagttgggctggtggacaatactgtcagaatcatctctctggac
ccatctgactgtctgcagccactcagtatgcaggcgctccccgcacagccggaggcgctg
tgtatcgtggagatgggaggtgcggagaggcaggatgagctcggggagagaggctccatt
ggttttctctatctcaacattggacttcagaatggtgtgctgctcagaactgtgctggat
cctgtaaccggtgacctgtctgacaccagaactcgctatctagggtcccggccagtcaag
ttgtttcgtgtgaggatgcagggtcaagaggcggtactggccatgtccagtcgttcctgg
ctcagctattcctaccagtctcgtttccacctcactcccctatcgtacgagaccctggag
tacgcgtccggcttcgcgtcagaacagtgtccagaaggcatagtggccatttcaaccaat
accctgagaattttggctctggagaagttgggtgcggtgtttaaccaagtggctttccct
ctccagtacacaccacgaaagtttgtgatccatccggaaagtaataacttgattatcatt
gaaacagaccacaatgcttatacagaggccaccaaggctcagcgcaagcagcagatggca
gaggaaatggttgaagctgcaggagaagatgagcgagagctggctgcagaaatggcggct
gcattcctcaatgagaacctgccagagtccatttttggagccccaaaagctggaaatggg
cagtgggcgtccgtcatccgggtgatgaatccaatccaggggaacaccctggacctggtc
cagttggagcagaatgaggcagccttcagtgtggcggtgtgtcggttcagtaacacggga
gacgactggtacgtcttggttggcgttgccaaagacctgatcctgaacccccgctctgtg
gccggaggactggtctacacttacaagctggtgaacaatggagagaagctggagtttgtg
cacaagacccccgtggaggaagtccccgctgcaattgctcctttccaaggtcgaatcttg
ataggagtcggcaaactgctgagaatttacgatctggggaagaagaagcttctgaggaaa
tgtgaaaacaagcacattgcaaacttcattgtgggcatacagaccatcgggcagcgcatc
atcgtctccgacgtacaggaaagcttcatatgggtgcgctacaagcgcaacgagaaccag
ctggtcatattcgccgatgatacgtatcctcgctgggtcactcactcctccctgctggac
tacgagaccgtggccggcgctgacaagtttgggaacatctgtgtgatccggctgcctcag
aatataaatgatgatgttgatgaagatccaactggtaacaaggctttgtgggaccgaggg
ctgctgaacggagcctctcagaaggcagaggtgattgtgaactatcatgtaggagagacg
gtgctgtcgctgcagaagacgacgcttatccccgggggctccgagtctctggtctacact
actttatctggaggcattggcatccttgtcccatttacttcccatgaggatcatgatttc
ttccagcacgtagagatgcacatgcgctccgagcacccccccatctgtgggcgagaccac
ctcagcttccgctcctattacttccctgttaagaatgtgattgatggagacttgtgtgaa
cagttcaactccatggagccaatcaagcagaagagcgtggctgaggagctggacaggacg
ccacccgaggtctcgaagaagctggaagacatccgtacacgatacgccttctag
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integrated database retrieval system
