Bufo bufo (common toad): 120981227
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Entry
120981227 CDS
T07950
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04120
Ubiquitin mediated proteolysis
bbuf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120981227 (SYVN1)
04120 Ubiquitin mediated proteolysis
120981227 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
120981227 (SYVN1)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120981227 (SYVN1)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120981227 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120981227
NCBI-ProteinID:
XP_040266761
LinkDB
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Position
10:complement(52650437..52685759)
Genome browser
AA seq
617 aa
AA seq
DB search
MLQGPSPPLSAKMRTAVMTGASLALTAAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQ
AFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTL
LLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDVLFVSHAYHSLVTRGAS
VQLVFGFEYAILMTMILTVFIKYVLHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMA
FMTIMVKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDN
VCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQTQPPADQP
DPAQQPHAAPAQQTPVLPPPPNFPPGMLPPFPPGMFPLWPPVGPFPPAPGAPGASAPEEA
SAGPSTASAPRPSDASTTGGPDSSAGTSLPGFPFPPPFLGMPLFPPFGLPPMPMPPAGFA
GMTEEELRAMEGHERQNLESRLQCLQNIHTLLDAAMLQINQYLTVLATIGPPRPPVPSTQ
SPLVTTDAVVSSSQPEETPTSDTPSADPDPSQSVPEESTSEEMIHDSEAGTSTEEPDAVE
LRRRRLQKLETGTSESQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagggtccctccccgcccttgagcgccaagatgaggacagcagtgatgacgggt
gccagcctggcacttacagctgcggtggtggctcacgcttattacctcaagcaccagttc
tacccaacagttgtttatctgaccaagtcgagtcccagtatggctgtgctttatatacaa
gcgtttgtcctagtcttcctcctaggaaagttcatgggcaaggtattttttggtcagttg
agagcagctgagatggagcacctcctggagcgctcgtggtatgcagtcacagagacctgt
ctggctttcacggtcttcagggatgacttcagcccacgttttgtggccctcttcactctt
ctgctgtttttaaagtgtttccattggttggctgaggaccgtgttgattttatggagcgc
agtccgaacatttcctggttatttcatttccgtattcttgcactgatgctcctgctgggt
gtgctggatgttctctttgtgtctcacgcttaccacagtttggtcaccagaggggcctcc
gtgcagctggtatttggatttgagtatgcaatactaatgacgatgatcctcacagtcttc
ataaagtatgtcctgcactctgtggaccttcagagtgagaatccatgggacaataaagct
gtatacatgttatacactgaactactgacaggctttataaaggttttgctgtacatggcc
ttcatgacaatcatggttaaagtccacacattcccactatttgcaattcggccaatgtat
ctggcaatgaggcagtttaagaaggcggtcactgatgccatcatgtcaaggagagcaatc
cgcaacatgaacacattgtatccagatgctacaccagaggagctgcaggcaatggacaat
gtgtgcatcatctgcagggaggagatggtgacaggagctaagagacttccctgcaaccac
atcttccacaccagctgtctgcgttcttggttccaaagacagcagacttgtcccacatgt
agaatggatgtcctcagagcttctctgcctactcaaactcagccacctgcagatcagcct
gaccctgcccagcagcctcacgcagcacctgcacaacagactccagttctcccaccacca
cctaacttccctccagggatgcttccaccattccctcctggaatgtttccactttggcct
ccagtgggtccttttccaccagcccctggggctcctggagccagtgcccctgaagaagcc
agtgctggaccctccactgcatctgctcctaggccttctgatgcatctaccactggtggt
cctgattcatcagctgggacatctctgccaggttttcccttcccacctccatttttggga
atgccactgtttcctccatttggtttgcctcctatgccgatgcctcctgctggctttgcg
ggtatgacagaagaggagttgagggcaatggaaggtcatgagaggcagaatctggaatcc
aggcttcagtgtcttcagaacattcatactcttctagatgctgccatgttacagataaac
caatatcttacggtgttggcaaccatcgggccccctcgtcctcccgtgccctctacacag
tctccattagtcaccacagatgcggttgtatcatccagtcagccggaagaaactcccact
tcagatacaccctcagctgaccccgatccctcccagtcagttccagaggaatccaccagt
gaagagatgatccatgactctgaagctggcacttcaacagaagaaccagatgctgtagag
ctacgaaggcgaagacttcagaaactggaaaccggcacctctgaatctcaatga
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