Bufo bufo (common toad): 120981229
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Entry
120981229 CDS
T07950
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120981229 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120981229 (SF1)
Spliceosome [BR:
bbuf03041
]
Complex A
Other components
Complex A specific factors
120981229 (SF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
SLU7_N
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
120981229
NCBI-ProteinID:
XP_040266764
LinkDB
All DBs
Position
10
Genome browser
AA seq
577 aa
AA seq
DB search
MDFSRKRKRSRWNDETPDQKTIIPGMPTVIPPGLSREQERAYIVQLQIEDLTRKLRTGDL
GIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVGLNPDFKPPADYK
PPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGR
KDGQMLPGEDEPLHALVTANTMENVKKAVDQIRNILKQGIETPEDQNDLRKMQLRELARL
NGTLREDDNRILRPWQNTETRSITNTTLCTKCGGAGHIASDCKFTSVTVRPGEPQSAQDK
ARMDKEYLSLMAELGEAPVPSSMGSATAPTHTPIQGSPRPAAITASQPPVNRPPWMATDR
PFPSMHGAPHSFHHPMGNAGNGPPLQPNPAGPHHHWMQPHPGAHPPGPHPMGLLHSHPMG
LMPPPPPPPPSGPAPPPPPPSAPSLHPWQQQQTTGAPHQPGAPLPWQQSSQTTNSGSASL
PPWQQQQNAATASSSNAIQSSASLVPPPPGVQPPLPPSAPPPPPPPPPGSSGLLYAPPPP
PPPPMDPSNFVTMMGMGVPGMPPFSMPPAPPPPPPQN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagccgaaaaagaaaacgcagtcgctggaatgatgagactccggaccaaaag
accatcattcctgggatgccaacagtcatccctccagggctcagccgtgagcaggagaga
gcctatatagttcaactacaaattgaggatctgactcgcaagcttcgcacgggagacctg
ggaataccccctaacccagaagacaggtccccatctcctgaacccatatataacagcgaa
gggaaacgtcttaacaccagagagttcaggacacgtaaaaagctggaggaggagcgccat
aaccttatcactgagatggttggcttgaatccggacttcaaacctccagcagattataaa
ccacctgctactcgtgtgagtgacaaagttatgatcccacaggatgaataccctgagatt
aattttgttggtttacttattggtcccaggggtaatacactgaaaaacattgaaaaagag
tgtaatgccaagataatgatccgtggcaaaggttcagtgaaagaaggcaaagtgggacgc
aaagacgggcagatgcttccaggggaagatgagccactccatgcattggtaaccgctaat
acaatggagaatgtcaagaaagccgtagatcagattcgtaatattctcaaacagggaatt
gaaacaccagaagatcagaatgatctccgcaaaatgcagttacgagagctggcacgtctt
aatggtactttgcgcgaggacgacaacaggattctgcgaccctggcaaaatacagaaact
agaagcattaccaataccaccctatgtaccaaatgtggaggggctggacatattgcttcc
gactgcaaatttacaagtgtgacagtgcggcctggagagccccagtcagcacaagataag
gcaaggatggataaagaatacctttcgcttatggcagaacttggagaagcaccggtccct
tcttctatggggtcagcaactgctccgacacatactcctattcaaggaagtccaaggcca
gctgccataactgcaagccagccacctgtgaaccggccgccttggatggcaaccgatcga
ccattcccatccatgcatggtgcccctcattccttccatcacccaatgggtaatgcagga
aacggtcctcctctacagcctaatcctgcaggacctcaccatcactggatgcagcctcat
ccaggagcacatccacctggtcctcatccaatgggtctcttgcactctcaccctatgggt
ttgatgcctcctccgcccccaccacctcctagtggtcctgcaccgccaccacctccacca
tccgcaccatctttgcatccttggcagcagcaacaaactacaggtgcaccacaccaacca
ggggctcccctaccttggcagcaaagctctcaaaccaccaactctggttcagcttctctt
cctccttggcagcagcaacaaaatgctgccaccgcctcatctagcaatgccatccagtcg
agtgcctcccttgttcctcctcctcctggtgtccagccacctttacctccaagtgctcca
cctccaccaccaccaccacctcctggatcctctgggcttctctatgctccaccaccacct
ccgcctcctcccatggatccctccaactttgtcactatgatgggtatgggtgttcctgga
atgcccccattttctatgccgcctgcccctccaccacctccccctcaaaattga
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