Bufo bufo (common toad): 120982136
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Entry
120982136 CDS
T07950
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120982136 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120982136 (CPSF2)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120982136 (CPSF2)
U7-dependent histone pre-mRNA processing factors
120982136 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
120982136
NCBI-ProteinID:
XP_040268022
LinkDB
All DBs
Position
11:complement(20256125..20269196)
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGAQEESALCYLLQVDEFRFLLDCGWDENFSMENIESIKKYVHQVDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFNFYTLDDVD
SAFDKIQQLKFSQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMISRPSLLITDSFNATYIQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLTLCHGFADLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSIILTYRTT
PGTLTRYLIDNPTERIIDIELRKRVKLEGRELEEYLEKEKLKKEAAKKLEQSKEVDIDSS
DDSDVEEDIDQPMAHKAKHDLMMKNEGNRKGSFFKQAKKSHPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISTTEAMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIIHGPPKASQDLAEACRAFGGKDIKVYTPKLHETVDAT
SETHIYQVRLKDSLVSSLKFCKAKDAELAWIDGVLDMRVSKVDTGVILEDGELKEEAEDS
EMQVDPPAIDTSTIAQQKAIKSLFDDDDKEFSEESEVIPTLEPLPSTEIPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNVVAVRRTETGRIGLEGCICEDFYKIRQLLYAQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatcattaaactgacgacgctctccggagcacaggaggagtccgccctctgc
tacctgctgcaggtcgacgagtttcgctttctccttgattgtggatgggatgagaacttt
tctatggaaaatatagaatccattaaaaaatatgtccatcaagtagatgccgtcctcctg
tctcacccggatccccttcacctaggagcgctcccttatgcagttggtaaactggggtta
aactgtgcaatctatgccaccatccctgtgtataagatgggccagatgttcatgtatgat
ctgtaccagtctcggcacaacacagaggatttcaacttctacacgttggatgatgtggac
tctgcatttgataaaatacagcaactaaaattttcccagatcgtacatttgaaaggtaaa
ggtcatggtttatccatcactccgttaccggctggccacatgatcggaggaaccatatgg
aaaatagtcaaggatggagaggaagagattgtctatgctgtggactttaaccacaagaga
gagatacacttgaacggttgctctttggagatgatcagtcgtccgtccttgctcatcact
gacagctttaacgccacttatattcaacccaggagaaaacaacgagatgaacaactactc
acgaatgtactggagaccttgcggggagacgggaatgtgttaatcgcagtcgacactgcc
gggcgagtcttggagcttgcgcagcttctcgaccagatttggagaaccaaggatgccggc
ctcggagtgtattctttagcccttctcaataatgtcagctacaatgtagtggagttctca
aagtctcaggtggagtggatgagcgacaagctcatgagatgttttgaagataaaagaaat
aaccccttccagttccgtcacttgaccctgtgccacggctttgctgatctcgctcgcgtc
cccagccctaaggttgtactggctagccagcctgaccttgagtgtggattttccagagag
ttgtttatccagtggtgccaagaccccaaaaactctatcatcctcacatacaggaccacc
cctgggactctcactcggtacctgattgacaaccctacggaaagaatcatagatatagag
cttaggaaaagagtgaagctagaaggaagggagcttgaggaatatctggaaaaggaaaag
ctgaagaaagaggctgcaaaaaaactggaacagtccaaagaagttgacattgattccagt
gacgatagcgacgttgaagaagatattgaccagcctatggcccacaaggccaaacacgac
ctgatgatgaagaatgagggcaacaggaaaggcagctttttcaagcaggcgaaaaagtct
caccccatgttccctgcccccgaagaacgaataaaatgggacgaatatggtgagattata
aagcctgaggacttcttagttcctgaactccaagcaaccgaggaagaaaagaacaagctg
gaatctgggcttacaaatggggaggaacctatggaccaagatttatcagatgttccaacc
aagtgtatttccacaacagaggcaatggagataaaagctagagtcacatacattgattat
gaaggccggtccgacggtgactcaatcaagaagatcatcaaccagatgaagcctcgtcag
ctaataatcatccacgggccacctaaagcgagccaggaccttgccgaggcctgccgagct
tttggtggtaaagatattaaagtttacactccgaaacttcacgagacggtggatgcaaca
agcgaaactcacatttaccaggtgagattaaaagactcccttgtaagctccctgaagttc
tgcaaagctaaagacgccgaactcgcctggatcgatggcgtccttgatatgcgggtgtca
aaggtggacacaggagtcatcctggaagatggagagttaaaagaagaagctgaagactct
gaaatgcaagtggatcctccagctattgacactagcaccattgctcagcagaaagctatt
aagagcctctttgacgatgatgacaaggagttttcagaagaaagcgaggtcatccctact
ctggaaccactgccgagtactgagattcctggacatcagtccgtgtttatgaacgagccc
aggctgtccgattttaagcaagtccttttgcgcgaggggatccaggcagagtttgttgga
ggcgtcctcgtctgcaacaatgtggttgcggttcgaaggacggagacggggcgtatcggt
ttagagggctgcatctgcgaggacttttataagataagacagcttttatacgcacagtat
gccattgtataa
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integrated database retrieval system
