Bufo bufo (common toad): 120982151
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Entry
120982151 CDS
T07950
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120982151 (NRDE2)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120982151 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
SR-25
Motif
Other DBs
NCBI-GeneID:
120982151
NCBI-ProteinID:
XP_040268056
LinkDB
All DBs
Position
11:21104685..21139390
Genome browser
AA seq
1132 aa
AA seq
DB search
MALFPAFAGCSSASAAPEQTGLDWLNNRSFCTEDALSLHQRTQLAPPPAHPVSPLSSNDP
KGQTSGSESSDSGAERRKKKRKKKKKKRKKHKKQKSNSEDDDNEEDGMRDLKNPQSVGAA
REDARGSAASRSIWMDEAQSAPEETFRVDRKADPANWEYKSLYRGDIVRYKRRGHSCLGI
DPKKQQIIWEGANNKKTSQKRADRYYSKVSVQTLRAKAESVSCGKDGADSASGAFIPVKD
CEPHTTASSSGPVSWVNPLGVYDSSTAMWLQGKGGPESKTPAPEPRDTSVLEKVEDHNRR
VRENPTDIKTWMEFVSFQDELIHQPSMYSTSENEMDSHRMSLKMVLEKKLSILERAIESN
PASTELKLARLRLCTEFWESAALLKEWQKLVFLHPNEPQLWQKYLQFCQGQFSTFSVSKV
NAIYGKCLSTLSAVHDGSMLSHPAMPGTERSLYDIFLQQCHFLRQAGHCEKVVSVFQALL
DFTFFKPDSVKNMTTKEQVEFFEPFWDSGEPRFGEKGAKGWSSWMRQQERGGWVIINNLD
EEEDDGSVEEIDIKDKSRPRPEIWLDVECAREAQHWIPWRPDAAKKQTEEDCEDPERQIF
FDDIGPSMIKISSAELQFQLVLSFLQLLGVPCDSRPPPTSLYLSLDDSSIFDYTLSYQWL
LTSYELPLSGVSAVGHLDTMSRGRGQIGQCKEGERFIQDVFQAAMSCVTAEQKIKLSVLW
LQYEITKVVRCLEEKNKKKLKSQGKRSKRLAKGLLKETVNRNSLALWKQYALLEWLLGST
EEARKVFDAAIGLAGSQGLKDQALRSLSLLYAELEAEVGAQPGHEAGSRALHVLTSLADS
SIYVPFKGPVPAVSILKARKAYERALEDSLKLPVDSALVTVTGCLALFQYLTAGIDSAVA
VFRQVSDSLAPPAGACDEAPGSWSPLQAVTVMHTNLLKYHAKVCVYPRAPLREALMDALR
LYPHNVTLWKSYIQSEGKSHNANKTRRFVDGIRRATDALEPYLFAIQAEEGRKKLLESVQ
RGGTGHIDVVMPETGLSNRIKVLYERGLATDQGSRCLLLWRMYLRFMVSQGHQDRSRGLF
YKAIQSCPWAKVLYLDAVEYFPDQLQEIVDLMTEKELRVRVPLEELDLLLED
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggctctatttccagcatttgctgggtgttccagtgccagtgccgcccctgagcaaacg
ggactggactggttgaataatcggagcttctgtacagaagacgccctgtccctgcaccag
cgcacccagctcgccccgccgcccgcccaccctgtttctccactgtccagcaatgacccc
aaaggccagacctccgggagcgagtcttccgattcaggggctgaaagaaggaaaaaaaag
aggaaaaagaagaaaaagaaacgcaaaaagcataaaaagcagaagagtaacagcgaggat
gatgataatgaggaggatggtatgagagatttaaagaaccctcagtcagtgggggctgca
agggaggacgctcgggggtcagccgcctcccgctctatctggatggacgaagcccagtct
gcaccagaggagacgttcagagttgacaggaaagccgacccggcaaactgggagtataag
tcgctgtaccggggagacattgtacggtataagaggagaggtcattcctgcctggggatt
gatcccaagaagcagcagatcatctgggagggcgcaaacaacaagaagacgtctcagaaa
agggcagaccgctattacagcaaggtgtcggtgcagacgttgcgggccaaggcggagtct
gtgtcctgtggtaaggacggtgcggactccgcttccggcgccttcattccagtgaaggac
tgtgaaccacacaccactgcctcctcttccggtccagtcagctgggtgaatccgctgggt
gtgtacgatagctccactgccatgtggctgcaaggtaaaggtggtcccgaaagcaagacc
ccagcaccagagccccgagacaccagcgtcctggaaaaggtggaggatcacaacaggaga
gtccgagagaatcctacagacatcaagacgtggatggagtttgtctcatttcaggatgag
ttgatccatcagcccagcatgtactccacgagtgagaacgagatggacagccaccgcatg
tctctaaagatggtcctggagaagaagctgtccattctggagagagccatcgagagtaac
ccggccagtacagagctgaagttggcgcggctgcggctgtgcacagagttctgggagagc
gccgcgctgctgaaagagtggcagaagttggtttttctgcaccccaatgagccacagctc
tggcagaaatatctgcagttttgtcagggccagttcagcaccttctctgtgtccaaagtg
aatgccatctacggaaagtgtctgagcaccctgtctgcggtgcatgacgggagcatgctc
tctcatccggccatgccaggcaccgagcgcagcttgtatgatattttccttcagcagtgt
cacttcctgcgccaggccggtcactgcgagaaagtcgtgtccgtgttccaagctcttctc
gacttcactttctttaagccggacagtgtgaagaacatgactacgaaagagcaggtggaa
ttctttgagcctttttgggatagcggggagcctcgatttggagaaaagggagccaaaggc
tggagctcatggatgaggcaacaggagaggggaggctgggtcatcatcaataacctggat
gaagaggaagatgatggatcagttgaagagatcgacatcaaagataaaagccgcccccga
cctgaaatctggctggacgtggagtgcgctcgggaagcccaacactggataccgtggagg
ccggacgctgccaaaaaacaaaccgaggaggattgtgaggaccccgagagacagatcttc
tttgatgacattggaccatccatgatcaagatttccagcgcagagttgcagttccagctc
gtcctatccttccttcagctcctgggagttccctgtgactctagaccgccccctacatcc
ttgtatctctccttggacgattcctccatctttgactacaccctttcttaccagtggctg
ctgacatcttatgaactccccctgtccggcgtcagtgccgttggccatcttgatactatg
agcaggggcagagggcagatcggacagtgtaaggaaggtgaacgcttcatacaagacgtc
ttccaggctgccatgtcctgcgtcactgcggagcagaagataaagctttctgtcttgtgg
cttcagtatgaaataaccaaggtagttcggtgcctggaggagaaaaacaagaaaaagctg
aaatcgcaagggaaaaggagcaagaggctggcaaaaggacttcttaaagagacagtgaac
cggaacagcctggcactgtggaagcagtacgctctgctggagtggctgctggggagcaca
gaggaggccaggaaggtgtttgatgccgccattggacttgcaggcagccaagggttaaag
gaccaggctttacgaagcctgtcgttactgtatgcagagctggaagccgaggtgggggcc
cagccagggcatgaagccggctcccgtgccctccacgtccttaccagccttgctgacagc
tccatttatgtgccgtttaaagggccagttcctgctgtcagtatattaaaagcaaggaaa
gcgtatgagcgggcgctggaagactccctgaagctccctgtagactctgctttggtcact
gtaaccggctgcctcgctctgtttcagtatctcaccgcaggaatagactctgctgttgca
gtgtttcgtcaggtctctgactcgctggcgccccctgctggggcatgtgatgaggcacca
ggctcctggagccctctgcaagcagtcaccgtaatgcacactaacttactgaagtaccac
gcgaaggtctgtgtttacccacgcgctccgctcagggaagccctaatggacgctttgcgc
ttgtacccccataacgtgaccctgtggaagtcgtacatccagtccgagggcaaatctcac
aacgccaacaagacccggaggttcgtagacggcatcaggagggcgaccgacgccctggag
ccgtatctgtttgctatccaggcagaagagggaaggaaaaagcttttggaatcggtgcag
aggggggggacaggacacatagacgtcgtcatgccggagacaggcctgtccaatcgcatc
aaggttctgtatgagcgtggactggccacggaccaaggatcgcgctgtcttctgctctgg
aggatgtacttacgttttatggtctctcaggggcatcaggacaggagccgtgggctgttc
tacaaggccatacaaagctgtccctgggcaaaggtattatatttggacgctgttgaatat
ttcccggatcagctgcaagaaatcgttgatttaatgacggagaaggaactgagagtgcga
gttcccctggaggagctggacctgttactggaggactag
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