Bufo bufo (common toad): 120986049
Help
Entry
120986049 CDS
T07950
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120986049 (SPG11)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120986049 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
120986049
NCBI-ProteinID:
XP_040270292
LinkDB
All DBs
Position
1:721707016..721779026
Genome browser
AA seq
2320 aa
AA seq
DB search
MELSVLLDPSITLQDWTELPLKVSLTRLKNLTLCSLLPDRSLCLTIFTSRTRARTQLDGP
FTQFLWEDENHNETALDQNPLVLTLGQNNDICVYEVSTEDGQVTLATLCLCDEDTLRQLC
AENHVCVPSLFSVLLLSLHGDDIFILLSSSVFVHLCYSGKDQKPNLVSCFCLDLDPETTE
HISDACLRHEILFLLNTSGLIYVFDTLDGSLVADIELPTWADIDTAEKLKSIRVSSNLDL
IVVSSERSCFLPLRLSENLRENINLALQKWRNERHSRISFFKETQGHDFQMDRSWDGTLL
SLLYKTKSSPGFPVCHQTASLQLRNSSSGAAFRWTVFGGGWVKVLKDNIEDPFSLHIWSV
TSYSMLFYVLQRDGYTTLIHWDMDTPGVNYHALGKALCVYSPDDEAPLVITDRGLSLVLF
SVTQNEFLTRLMIHGSASTADTLCHLNNWGRCSVPIHTLEAGLDNRQLDTVDFFLKSKES
ILSSLTSEDGAIHSEVYLCNVQDLVPALDLLSSYIHGTDQEAQSKHFSEQLLQLTLRFLN
AQLLTLCNLQSEPDPGLEQCVGILTGYITKLRPFMKKFQQQQPPVPLMPPHAGRRHGAWE
NMTVENMISDAILTNCIPEAQTFLREQGHHLSSLTWLKREGLKLVYRCLLECSVSEACQL
LQNMGYSIWDELHRICLHTSDLGVRTLLVDLLQKEGLFSEQQQQAIHTVCQLEKLYCNTC
RTSEEKKNVLIARPSWRICAKSQEVKKLQDALTAVRDEPQTLLLHWAKDWDCETQESLLL
PWRKNTDMSAIAPKILWRHLTMWHDWTQVASWIESIGLPQEKGDIERPLWPLISPTVIDT
NTLCCSYMRQKILDELSRMNIFIPSEVEDFELLVERLAISGRLMELTTSKSPDVHNSFVV
LCVERGLQYMLYSYLDCHRLNPETCSALAKTTLHETYPWFGFLVHIRQVCDNTDADRMFQ
ASLSNAHMLMPGCQPSVNNMLLDGHTLLALATIMYAPGGIDGVLKQCEEPSLCQWNVDLP
LLKMALTPYPKLRAALFSQHPSNAGSPPDITLYHLLQALSPFHPAHFFTWQPTNSLAASD
TSSALPHCSCPKLVKDLSVVEQLDTFFYIRSGRPSIAFSFFLVHHLLKSKVPKQLIHQVA
EDVYSLALSCFHVPVVISSCVCFLELLGLSSYKLRVDVNVANVLLRHSSSLQEESGHKFH
IKALAQRLSKLVENEVEAAKDLLLSLEDVVDATLQQDDSPLPPHSLWVTVVQFCLLHDIP
MSTSYLRYCAQRQDWLQLLVHTNSPEQVFYVLDDLNPVLCSHISLALQDKVSSDCSLQRI
VSDTTWDSLHHVLLKCLSMEEPGQMLLKECMRWRVPLFSALAASTQDADPISCLCAWIVT
SVDAATYTEITQTMSDSVDHKWSLEDLVQIWDILLARADSGTLEKAFSIFMEDCPLLILL
EMYELCLHHKNYTQAEHKVVEFQGRMTSLQSTDCSHPAPIPVLWLHARASHLLQLLLLQS
RTPYELQKVLQFLCDSGSHNICEGMDIHKLNALYQILDGYPVVIRKQLIEDYSPAALQVE
CQRLLQTLLEGAHFALAHQVAELADLPTDNLVIEEVLQDQSLLREMGQWGCPQSRAQYWR
KCHVTFCSKQLSPVVASNFFQSQASHHAATGTLLLEQMEALAEQELLFTLAGHWLSLHEC
SSLRTLEELEQQIWKYRIERETLNRSGGSRLLSSLSGFTKFASEFSFSGLAALNSFQLLD
IFSLPPLHGDKNANSRVLCGLIDRLLDDSKVHEASRVCRYFQLSHRDVWIVLSCRALASG
EMTMHQLPPDIQDIITEGKDVQENTWNRRRRLQSSSSVDSTSSQTPTNPVVTYLEVLKDA
CSHGKTFCRQLLCMYELSQDLGCSFSEVSSRDPREVLVTLLSSFRPELCDRAQAVITSHG
LSPETVAHIVAEGSLKIWRTLNKEGGQFEVYNLSENRSNFLQLAKLCPDPTLVGLYLLDH
LETVPLTELHCVIEILISAHDCFSLTCHLEGIGRVLQACRNLTEMHLAPNQEYSLMVRLL
SGIGRYNDMVYVFDILHKNQHFEVLLRKQLDTKGGLQTALLEYIKRCHPGDSEKHNMTAL
CFSLHRDIGHNHEHAAKIQLRLIQSKPWEYWMSDQGELRSSIMKALTLLIDAAESYSKDS
CVRQSLRCARLTRLLTLQLHLLNNGHQTKLINLERENLMEPILALPRFYQAVIVTEAYDL
QPDWPDVLYSKVIVGGDFQYLEEFKQRQLLSSGVFEQLSNKCKLNPPGSTGLQNLKRVIS
YCEDINTRYKLAIENKFYDITDVLMRDSQTRCCLTDMLSR
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggaactaagtgttcttctggatccttctataactttacaagactggactgagctgcct
ctaaaggtgtccttgaccagactcaaaaacctgaccttatgtagccttctgccggacaga
agcctctgcctcactatcttcacctctagaacaagggctcgtacacagctggatggaccc
ttcactcaatttctgtgggaagatgagaaccataatgagactgcactggaccagaaccca
cttgtcttgactcttggtcagaacaatgatatatgtgtctatgaagtgtctactgaggat
gggcaggtgacattggctactctctgtctctgtgatgaagacaccttgaggcagctctgt
gcagagaatcatgtttgtgttccttccttgttctcggttcttctcctgtctcttcatggt
gatgacatattcattttgctcagcagtagtgtctttgtacatctttgctactctggcaag
gaccagaagccaaaccttgtgtcttgtttctgtctggacctggacccggagactacagaa
cacatctccgatgcatgtctcaggcatgaaatcctgtttcttctgaacacttcagggctc
atttatgtttttgacacccttgatgggtcgttagtggctgacattgaacttcccacatgg
gctgacattgatacagcagaaaaactgaaaagtatacgcgtgtcttcaaacctagatctc
atcgttgtctcctctgaaagatcttgctttcttcccttgaggttaagtgaaaatctcaga
gagaacatcaatctggcactacagaaatggcgtaacgagcggcactcaaggatatcattc
tttaaggagactcaaggacatgattttcaaatggacaggtcatgggatggcacattattg
tcactgctctacaagaccaagagcagcccaggctttcctgtgtgccaccagactgctagt
ttacagctcagaaattcgtcctctggagcagcatttagatggacagtatttggaggaggt
tgggtgaaagtcctgaaagataatattgaggatcctttcagtcttcacatatggtctgtg
acctcctatagcatgttgttctatgttctgcaaagagatgggtataccaccctgatacac
tgggacatggatacaccgggcgttaattaccatgctctgggaaaagctttgtgtgtttat
tctccagatgatgaagctcctttggtgatcacagatcgaggtctttctcttgtccttttt
tcggtgacacaaaatgagttcctgacccggttaatgattcatggcagtgccagtactgcg
gatactctgtgccacctaaataattgggggcgctgttctgtacccattcacacactggag
gccggcttggacaacaggcagttggatacagttgactttttcctaaagagtaaagaaagt
atcctgagctctttaacctctgaggacggtgccattcattctgaggtctacctctgcaat
gtgcaggatcttgttccagctctggatctgctctcctcttacatccatggcacagatcag
gaggctcaaagtaaacacttctccgagcaactcttgcagctcacgctccgcttcctcaat
gctcagttgctgacactctgcaatttgcagtctgagccagaccctggcttagaacaatgt
gtgggaatattgactggttacattactaagcttcgacctttcatgaagaagtttcagcag
cagcagccaccggttcctttgatgcccccacatgctgggagaagacatggagcgtgggag
aacatgactgtggagaatatgatttcagatgccatcctgacaaactgcatccctgaagcc
caaaccttcttgcgagaacaaggacatcacctatctagcttgacttggttaaaaagagaa
ggcctgaaactggtttacagatgtctactagagtgctctgtatcagaggcctgccagctt
ctccagaacatgggctattccatatgggatgaacttcatcgtatatgtctgcacacttca
gatctcggagtacggacactattggttgacctgctgcagaaagaaggacttttctcagaa
cagcaacaacaagcgatccatacggtgtgccaacttgagaaactgtattgtaacacgtgc
cggaccagcgaggagaagaaaaatgtgcttatcgctagaccttcatggagaatctgtgct
aagtctcaggaggtgaagaaattgcaagatgctctgactgctgtaagagatgagccacag
actttacttcttcattgggctaaggactgggactgtgagacacaagagtcacttttgctg
ccttggaggaaaaacacagacatgtctgctatcgcacccaaaatcctttggcgccacttg
actatgtggcatgattggacacaggttgcctcttggattgaaagcattggactgccccag
gaaaagggagatatagagcgccccctctggcctctcatcagtccaacagtcattgatacg
aataccttatgttgcagctacatgaggcagaaaatactggatgagttatcaaggatgaac
atttttattccctctgaagtggaagattttgagctccttgtggaacgcttggccattagt
gggagactgatggaactcactacttcaaagagtccagatgttcataacagctttgtagtc
ttatgtgttgagcgtggactccagtacatgctgtacagttatctagattgtcacagattg
aatccagaaacgtgctctgctttggccaagacaaccttacatgagacgtacccatggttt
gggtttttggtgcatattcgacaagtttgtgacaatacagatgctgatcggatgttccag
gccagcctgtccaacgcccatatgctgatgcctggttgccagccaagtgtaaacaatatg
ctcctggatgggcatactctccttgctcttgcgacaatcatgtatgctcctggaggaatt
gatggggtattgaagcagtgtgaggagccaagcctttgccaatggaatgtagaccttcca
ttattaaagatggcactgaccccctaccccaagctcagagcagctctcttctcccagcac
ccgtctaacgctggatcacctcctgacattactctttaccatcttctgcaggccctttca
cccttccatcctgcgcatttcttcacatggcagccaacaaattctctggcagcaagtgac
accagttcggcgcttccacactgctcctgtcctaaactggtgaaagatctgtcagtagtg
gagcagctggatacattcttctatatacgcagtggccggccatccattgccttttccttt
tttcttgtgcatcatcttctgaaaagcaaagttcccaagcagctaattcatcaggttgca
gaagatgtgtactcactagccttgtcatgctttcatgtccccgttgtcatttcctcctgc
gtttgcttccttgagctacttggtcttagtagttacaagcttcgtgtggatgtaaatgtg
gccaacgtcctcctacggcacagttcatctctccaggaggagtcgggacacaaattccac
ataaaagcattagctcagaggctgtcaaaactagtggaaaatgaagtagaggctgcaaaa
gatcttttactaagcttagaagacgtggtggatgcaactttgcagcaggatgacagtcca
cttcctcctcacagtctatgggtcacagtggttcagttctgtctcctccatgatattcct
atgagcaccagctatttgaggtactgtgcacagagacaagactggctgcagctgctggtt
catacaaacagcccagaacaggtcttctatgtcttggatgatttgaatccagttctgtgt
agtcatatctccttggcgttacaagacaaagtctccagtgattgctccttgcaaagaatt
gtcagtgacacaacctgggatagtctccaccatgtgctgctgaaatgccttagtatggaa
gaaccaggacagatgcttctgaaggagtgtatgagatggagagtgccactattcagtgct
ctggctgcttctacacaggatgcagaccccatctcgtgtctatgtgcctggatcgtgact
tccgtggatgctgctacttatacagagatcacgcagacaatgtctgattctgttgatcat
aagtggagcctggaagatctggtgcagatttgggatattctcctggcaagggcggatagc
ggcacactggagaaagccttcagcatatttatggaggactgccctttgctgatcctgctt
gaaatgtatgagctttgtctgcatcacaagaattacacacaggccgagcataaagtagtg
gaattccagggcaggatgacgagtctccagtctaccgattgctcccaccccgctccgatc
cctgtcttgtggcttcacgcccgggcttctcatctactccagcttcttcttctccagagc
cggactccatatgagttacagaaagttttgcagtttctttgtgatagcggcagccataac
atctgtgaaggaatggatattcacaaactgaatgctctctaccaaatcctggacggttat
cctgttgtcattaggaagcagcttatagaagactacagccccgccgcgctccaggtggag
tgtcagagactgctgcagactctgctggaaggagctcacttcgctttggctcatcaagta
gctgaacttgcagatctgcccactgacaatctggttatagaagaggtgctacaagaccaa
agccttcttcgagagatggggcaatgggggtgcccacagagccgagcacagtattggcgg
aagtgtcatgtgactttttgcagcaaacagctgtcccctgtagtggcatccaacttcttt
caatctcaagcctcccatcacgcagccactggcaccctcctattagagcagatggaggca
ctggcagaacaagagctgttgttcacacttgcagggcactggctctctcttcatgaatgc
tcttctctgaggacattagaagaattagaacagcagatctggaagtatcgcatcgagcga
gaaacactaaatagatctggtggatctcgcctactgtcctctctttccggttttactaag
tttgcctcagaattttcattttctggtctggctgcactcaactcttttcagcttctcgac
atcttcagtcttcctccactacatggtgataaaaatgcaaactcccgcgtactgtgtggt
ctgatagaccggctactagatgacagtaaggtacatgaagccagccgtgtttgcaggtac
ttccagctctcccatcgtgatgtatggattgtgctgagctgccgggctctggcatctgga
gaaatgacaatgcatcaactgcctccagatatccaggatatcattactgagggcaaagac
gtacaagagaacacatggaaccggagaaggagattgcaaagttcatccagtgtggactcc
acatcttctcagactcccactaaccctgttgtcacatatctggaggtcctgaaggatgct
tgttcacatggaaagactttctgcagacagctgctgtgtatgtatgagctgagtcaggat
cttggatgttccttctcagaagtatcatcccgagatccaagagaagttttggttaccttg
ttgtccagctttcgtcctgagctttgtgaccgagcacaagcagtcatcacttcacatgga
ctttcccctgagactgtagcccatattgttgctgaaggaagcctgaagatatggaggaca
ctaaacaaggaaggaggtcagtttgaggtatataacctctctgagaacagatccaacttt
cttcagcttgcaaagctgtgtcctgatccgactcttgtggggttatatttactggatcat
ctagagactgttccacttactgagcttcattgtgtaattgaaatccttatctctgctcat
gattgcttcagtctgacatgccacctagaagggatagggcgcgtcctccaagcatgtcgc
aacctgacggagatgcatttagctcccaaccaggagtatagcctaatggttagactcctg
tcagggattggtcgatataatgatatggtttatgtctttgatatcttacacaaaaaccag
cattttgaggttttgctaaggaaacagcttgatacgaagggcggattgcagactgcactt
ttggaatatattaagcgatgtcacccaggtgacagcgagaagcacaatatgactgcactc
tgcttcagtctacatcgggatattggccacaaccacgagcatgcagcaaaaatccagctc
agattgatccagtctaagccttgggaatattggatgtctgaccagggagagctgagatct
tctattatgaaggccctcactctgctgattgatgctgctgagagttattcgaaggattct
tgtgttcgccagtcactacgatgtgcccgcctcacccgtcttttgaccctacaacttcat
ttgttgaacaatggccaccaaacgaagctgattaacctggaaagagagaacttgatggag
cccatattagcacttccaagattttaccaggctgttattgttactgaagcatatgatctg
cagccagactggccagacgtcttgtatagcaaagttattgttggaggcgattttcagtac
ctagaagagttcaagcagcgtcagcttctcagcagtggagtgttcgagcagttgtcaaac
aaatgcaaactgaaccctcctgggtccactggactacagaacctgaagcgagtgatctct
tactgtgaggacatcaacacacgttataaactggctattgaaaacaaattctacgacatt
actgatgtcctgatgagagactcgcagacacgatgctgcttgacagatatgctgtctcga
taa
DBGET
integrated database retrieval system
