Bufo bufo (common toad): 120986223
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Entry
120986223 CDS
T07950
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120986223
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120986223
Spliceosome [BR:
bbuf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120986223
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
120986223
NCBI-ProteinID:
XP_040270596
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All DBs
Position
1:761972426..761981859
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AA seq
427 aa
AA seq
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MTEQDVENELLDYEEDDEPQAPTETPAPAGQKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEAVEGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGLAIKKDEETIRKSCPHIVVGTPGRILALVR
QKTLSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALAQLLVEQNFPAIAIHRGMMQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEEDAKILNDVQDRFEVNVGELPDEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaggatgttgaaaacgagttgttggactacgaggaagacgatgagccccag
gcccccaccgagacccctgctccagctggccagaaggaggttaaaggctcctatgtgtcc
atccatagctctggcttcagagacttcttgttgaagcctgaactgctgcgagccattgtg
gactgtggctttgagcacccgtctgaagttcaacacgaatgtattcctcaggccattctt
ggcatggacatcctctgccaagccaaatctggtatggggaagaccgctgtgttcgtcctg
gccactcttcagcagattgaggcggtcgaaggacaagtctctgtcctggtgatgtgccac
acacgtgagcttgcgttccagatcagcaaggagtacgagagattctccaagtacatgcca
acagtgaaggttgctgtattcttcggggggcttgctataaagaaggatgaagagacaata
cgcaaaagttgccctcacatcgtggttggaacgccaggtcgtatcttggctcttgttaga
cagaagacgctcagtttgaagaacgtcaaacactttgtcctggatgaatgtgacaagatg
ctggagcagctggatatgcgtagagatgtgcaggagatcttccgtctcacccctcacgag
aagcagtgcatgatgttcagtgccacactcagcaaggagattcgtccggtctgcaggaag
ttcatgcaggatcctatggaggtgtttgtagatgatgaaaccaagctgacgcttcatggc
ctgcagcaatattatgtcaaattgaaggacagtgaaaagaaccgcaaattgtttgacctg
ctggatgtgctagagttcaaccaggtagtgatctttgtaaaatctgtgcagagatgtgtg
gcactggcacaactcctggtggagcagaacttccctgctatagctattcacaggggaatg
atgcaagaggagaggctgtcacggtaccaacagtttaaggatttccagagaagaatcctg
gtagctactaacctctttggacgtggtatggacattgaaagagttaacatagtcttcaat
tatgacatgccggaggactctgacacctacttgcacagggtggcccgtgcggggcgcttt
ggcactaaaggtctggctgtgacgtttgtgtctgacgaggaagatgccaaaattctgaat
gatgtccaagacagatttgaagtcaatgtgggagagttgcctgatgagatagacatatcc
acttacattgaacagagtcgataa
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