Bufo bufo (common toad): 120987102
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Entry
120987102 CDS
T07950
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
120987102 (PDZRN4)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120987102 (PDZRN4)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
120987102 (PDZRN4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Chp1_domII
Motif
Other DBs
NCBI-GeneID:
120987102
NCBI-ProteinID:
XP_040271668
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All DBs
Position
1:complement(504071905..504280005)
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AA seq
774 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLLKATHEEAVEAFRNAKDPIVVQVLRRTPVNR
AHGSSQEVQLVNVSTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
DGNEYLSSLPADGDRTEDFEYEEIELCRLNNQERLGLTVCYRTDDEEDTGIYVSEVDPDS
IAARDGRIREGDRILQINGQDIQNREEAVALLSNDECQKIVLLVARPDLPLDEGWLDDER
NEFLEELNMQILEEQRHEAMQYPADEVKQQKKPEEEDGTTDTATSSSNNHEKDSGVGRTD
ESLHHDESSEMENIVKNHITHLQKNADLRQSQDTLGSSEIHCNESLISGEYIDSDLTVNQ
EEDCDRFRQLLELKCQIRNRGEYDLYYSSSTIECSRSEHGVEHELQLLNEELRSIELECQ
SIMQAHRRKNVNNQSGDIWEIHDDEFYNYNTSIEVQRSKVGMREHAERSDKDSSSAYNTA
ESCRSTPLTVDRSPDSSLQRIISITNRKNLRSTIVTNHLSSGLSSIENTPSKSKTNERIL
STEYQGNTLDCSAFLDHRKNSTEEIPYLSPYHSSAYRHGNIPVHARHYQSYMQLIQQKSA
VEYAQSQINLVTMCKESQRSMEPRMEWKVKIRSDGTRYITKRPVRDKLLKERALKIKEER
SGMTTDDDTMSEMKMGRYWSKEERKQHLMRAKEQRRRREFMMRSRLECLKESPQSGSESR
KEVSIIELSHKKMMKKRNKKILDNWMTIQELMTHGEKSPDGARVHNAFLSVTTV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttccagaagagagaggagcactacaaactgctatatgaa
gtttcacaggttaatgggaaagatcttttaaaagctactcatgaagaagcagttgaagcc
tttcgtaatgctaaagacccaattgtagttcaagtattaagacgaacgccggttaacaga
gctcatggaagttcccaggaggtacagcttgtgaatgtgagcactcaaacagacataaca
ttcgagcatatcatggccctcgctaaacttagaccatctactccaccagttccagatatt
tgcccttttcttctatctgacagctgccattctcttcatccagtggagcatgaattttac
gacggtaatgagtatctttccagccttcctgctgatggagacagaacggaagactttgag
tatgaggaaattgaactatgtcgcctaaataatcaggagagactgggtctaacagtctgc
tacaggacagatgatgaagaggatacgggaatatatgttagtgaggttgatccagatagc
attgcagccagggatggacgcattagagaaggagacaggatcttgcagataaatggccaa
gatatccagaacagagaggaggcagtggctttgctttccaatgatgaatgccagaaaatt
gttcttctggttgcaaggccagatttaccgctggatgaaggctggctcgatgatgaaagg
aatgaattcttggaagagttaaacatgcaaatactggaagaacaacgtcatgaggcaatg
caatacccagctgatgaagtgaaacagcaaaaaaagccagaagaggaagatggtacgact
gacacagcaacttcatcatccaataatcatgaaaaagacagtggtgtgggccgcactgat
gaaagcctgcaccatgatgagagctcggagatggaaaatatagtcaagaatcacattact
cacctacagaaaaatgcagacttaagacagagccaggatacgttaggtagcagtgaaata
cattgcaatgaaagtttgatttctggggaatacatcgattctgatctcactgtcaatcaa
gaagaagattgtgacaggttccggcaattgctagagcttaagtgccaaatccgaaatcga
ggtgaatatgacctgtactactccagcagcacaattgaatgtagcagatcagagcatgga
gtagagcatgagttacaacttttaaatgaggagcttagaagtattgaacttgaatgccag
agtattatgcaggcacaccggcgaaaaaatgttaataatcagagtggagacatttgggaa
attcatgatgatgaattttacaattataataccagcattgaagtacagagaagtaaagta
ggtatgagagaacatgcagagagatctgataaggacagttctagtgcttataatacagca
gaaagctgtagaagcacacctctgacagtagacagatccccggacagttctcttcaaaga
ataatcagtattacaaaccgtaaaaatctcagaagcacgattgttacaaaccatttatca
tctggactaagcagcattgagaataccccttcaaaatctaaaaccaatgaaagaattctt
agcacagagtaccaaggaaatacattagactgcagtgcattcttagatcacagaaagaat
agcactgaggaaattccctatctttccccatatcacagttcagcatatagacatggaaat
atacctgtccatgcaagacattatcaaagttacatgcaactcatccaacagaaatcagcc
gtggaatatgcacaaagtcaaataaatctagtaacaatgtgtaaagagtcacaaaggtca
atggaaccaaggatggaatggaaagtaaaaataaggagtgatggtacaagatacattaca
aaaagaccagtaagagacaaacttcttaaagagcgtgccttaaaaatcaaggaggaaaga
agtggaatgaccacagatgatgatacaatgagtgagatgaagatgggacgttattggagt
aaggaggaaagaaagcagcaccttatgagagcaaaggagcaaaggcgaaggagggaattc
atgatgcgcagcagattggaatgtcttaaagaaagtccacagagtggcagtgagagcaga
aaggaagttagcatcattgaactgagtcataaaaaaatgatgaagaaacgtaacaaaaag
atactggataactggatgacaatccaagaactcatgacacatggagaaaagtcccctgat
ggagctcgagtacataatgcctttttatcagtcactactgtttga
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