KEGG   Bufo bufo (common toad): 120988523
Entry
120988523         CDS       T07950                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf03030  DNA replication
bbuf03410  Base excision repair
bbuf03420  Nucleotide excision repair
bbuf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120988523 (RFC5)
   03410 Base excision repair
    120988523 (RFC5)
   03420 Nucleotide excision repair
    120988523 (RFC5)
   03430 Mismatch repair
    120988523 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbuf03032]
    120988523 (RFC5)
   03036 Chromosome and associated proteins [BR:bbuf03036]
    120988523 (RFC5)
   03400 DNA repair and recombination proteins [BR:bbuf03400]
    120988523 (RFC5)
DNA replication proteins [BR:bbuf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120988523 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120988523 (RFC5)
Chromosome and associated proteins [BR:bbuf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120988523 (RFC5)
DNA repair and recombination proteins [BR:bbuf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120988523 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120988523 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_11 AAA_22 RuvB_N AAA_assoc_2 AAA_24 AAA_14 ResIII DEAD AAA_16 DUF815 PhoH AAA_30 AAA_7 AAA_5 AAA_19 DNAX_ATPase_lid TIP49 ATPase_2 AAA_2 Mg_chelatase Thioredoxin_6 bpMoxR
Other DBs
NCBI-GeneID: 120988523
NCBI-ProteinID: XP_040271967
LinkDB
Position
2:complement(200886223..200954485)
AA seq 335 aa
MVSDEKARAGQSRNLPWVEKYRPQTLDDLISHQDILSTIQTFISEDKLPHLLFYGPPGTG
KTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFSSTRTIFKKGFKLVILD
EADAMTQDAQNALRRVIEKFTENTRFCMICNYLSKIIPALQSRCTRFRFGPLSSEMMVPR
LEHVVQQENVDITPDGMKALVTLSSGDMRRALNILQSTNMAYGKVTEDTVYTCTGHPLRA
DIANILDWMLNKDFTTAYKQIMELKTLKGLALHDILTEVHVYVHRVDFPPSVRMHLLTKM
ADIEYRLASGTSEKIQLSSLIAAFQVTRDMIAAEA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggtatccgacgagaaagctcgtgccggacaaagcagaaacctgccatgggtggaaaag
tatcgaccacaaacactggatgatttgatctcccatcaggatattcttagtacaattcaa
acgttcataagtgaagacaaactgcctcaccttttattctatggacctcctgggactggc
aaaacttccacaatcctagcttgtgcaaagcagctttataaagataaggagttcaactct
atggtactagagttaaatgcatctgatgatcgtggcatagatattgtcagaggccccatt
ttaagtttttccagcacaagaacaatatttaaaaagggttttaagcttgtgatcttagat
gaagcagatgcaatgactcaagatgcacagaatgctttgagacgagtgattgagaagttc
acagaaaacacgagattttgcatgatttgcaattacttgtcaaagatcatcccagcttta
cagtcccgatgcacaaggtttcgctttggtcccctgagctcagaaatgatggtgcccagg
ctggaacatgtagttcaacaggagaatgtggatattactccagatggaatgaaggctttg
gtgaccctgtctagtggagatatgcgtagagctctaaatatattgcagagtacaaacatg
gcttatggaaaagtgactgaggatacagtatatacctgcactggtcatccactgagagca
gacattgctaacattctggattggatgctaaacaaggatttcaccacagcatataaacaa
atcatggaactgaagaccctcaaaggcctggctcttcacgacattctcactgaagtacat
gtctatgtacacagagtggattttccaccatctgttcgaatgcatttgctaacaaagatg
gctgatatagagtacagactggcttctgggaccagcgagaagattcagctcagttccctc
atagctgcattccaggtcactcgagacatgattgcagcggaagcttag

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