Bufo bufo (common toad): 120988523
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Entry
120988523 CDS
T07950
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03030
DNA replication
bbuf03410
Base excision repair
bbuf03420
Nucleotide excision repair
bbuf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120988523 (RFC5)
03410 Base excision repair
120988523 (RFC5)
03420 Nucleotide excision repair
120988523 (RFC5)
03430 Mismatch repair
120988523 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
120988523 (RFC5)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120988523 (RFC5)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120988523 (RFC5)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120988523 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
120988523 (RFC5)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120988523 (RFC5)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120988523 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
120988523 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
RuvB_N
AAA_assoc_2
AAA_24
AAA_14
ResIII
DEAD
AAA_16
DUF815
PhoH
AAA_30
AAA_7
AAA_5
AAA_19
DNAX_ATPase_lid
TIP49
ATPase_2
AAA_2
Mg_chelatase
Thioredoxin_6
bpMoxR
Motif
Other DBs
NCBI-GeneID:
120988523
NCBI-ProteinID:
XP_040271967
LinkDB
All DBs
Position
2:complement(200886223..200954485)
Genome browser
AA seq
335 aa
AA seq
DB search
MVSDEKARAGQSRNLPWVEKYRPQTLDDLISHQDILSTIQTFISEDKLPHLLFYGPPGTG
KTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFSSTRTIFKKGFKLVILD
EADAMTQDAQNALRRVIEKFTENTRFCMICNYLSKIIPALQSRCTRFRFGPLSSEMMVPR
LEHVVQQENVDITPDGMKALVTLSSGDMRRALNILQSTNMAYGKVTEDTVYTCTGHPLRA
DIANILDWMLNKDFTTAYKQIMELKTLKGLALHDILTEVHVYVHRVDFPPSVRMHLLTKM
ADIEYRLASGTSEKIQLSSLIAAFQVTRDMIAAEA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtatccgacgagaaagctcgtgccggacaaagcagaaacctgccatgggtggaaaag
tatcgaccacaaacactggatgatttgatctcccatcaggatattcttagtacaattcaa
acgttcataagtgaagacaaactgcctcaccttttattctatggacctcctgggactggc
aaaacttccacaatcctagcttgtgcaaagcagctttataaagataaggagttcaactct
atggtactagagttaaatgcatctgatgatcgtggcatagatattgtcagaggccccatt
ttaagtttttccagcacaagaacaatatttaaaaagggttttaagcttgtgatcttagat
gaagcagatgcaatgactcaagatgcacagaatgctttgagacgagtgattgagaagttc
acagaaaacacgagattttgcatgatttgcaattacttgtcaaagatcatcccagcttta
cagtcccgatgcacaaggtttcgctttggtcccctgagctcagaaatgatggtgcccagg
ctggaacatgtagttcaacaggagaatgtggatattactccagatggaatgaaggctttg
gtgaccctgtctagtggagatatgcgtagagctctaaatatattgcagagtacaaacatg
gcttatggaaaagtgactgaggatacagtatatacctgcactggtcatccactgagagca
gacattgctaacattctggattggatgctaaacaaggatttcaccacagcatataaacaa
atcatggaactgaagaccctcaaaggcctggctcttcacgacattctcactgaagtacat
gtctatgtacacagagtggattttccaccatctgttcgaatgcatttgctaacaaagatg
gctgatatagagtacagactggcttctgggaccagcgagaagattcagctcagttccctc
atagctgcattccaggtcactcgagacatgattgcagcggaagcttag
DBGET
integrated database retrieval system