Bufo bufo (common toad): 120988624
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Entry
120988624 CDS
T07950
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbuf03009
]
120988624 (DDX55)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120988624 (DDX55)
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
Pre-60S particles
Helicases
120988624 (DDX55)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
120988624
NCBI-ProteinID:
XP_040272144
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Position
2:217635169..217707005
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AA seq
591 aa
AA seq
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MENVTEGTWDSLPEKLNDQIRQTLRELRFTHMTPVQAATIPLFMSNKDIAAEAITGSGKT
LAFVIPLLEILLRREGKLKKHQVGAIIITPTRELAMQINEVLSYFTKHFPQFCQILLIGG
SNPVEDVKKFKEQGGNIIVATPGRLEDMFRRQADGLDLVTAVKTLDVLILDEADRLLDMG
FEASINTILGFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRIAVKEKGVAATSTQKTPT
RLQNYYMMCKADEKFNYLVSFLRQRKQEKHLVFFSTCACVEYYGKALEAFVKNVNVMSIH
GKMKHKRNRIFTEFRKLESGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGNHGNALVFLLPMEESYVNFLSINQKCPLQEMADFKCTVDHLPKLRSIAESDRAMFEK
GMKAFVSFVQAYAKHECNLIFRVKDLDFSTLARGFALLKMPRMPELRGKDFSDFVSANID
TDSIAYKDKNREKQRRKMLQEKKEKQEGERRKNFAKNKAWSKQKVKREKKKKMALKRKHE
EGSDIDDEDVSELLRDTRLLKKLKKGKITEEEFEKQLTAAGRSRGESDASD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgttacagaagggacttgggactctttgccggagaagctgaatgaccagatc
cgccagactctgagggagctgcgcttcacccacatgacgccggtgcaggccgcaaccatc
ccgctatttatgagcaacaaagatatcgccgcagaagctattactggaagtgggaagact
ctggcctttgtgatcccattgttagaaatacttttgagaagagaaggaaaactaaagaag
catcaggttggtgcaataattatcactccgacccgggaacttgcaatgcagattaacgaa
gtgctctcttacttcaccaaacatttcccccagttctgtcagatcctccttattggtgga
agtaatcctgttgaagatgtgaagaaatttaaggaacaaggtggaaacattattgtggct
actccagggaggttggaagatatgtttcggagacaggcagatgggctggatttggtcact
gctgtgaagaccctggacgttctgattttggatgaagcagacagacttctggatatgggg
tttgaagcaagcataaacacaatattgggctttctgcccaagcaacgaaggaccggtctg
ttctctgccacccaaactcaggaagtagagaatctggtccgggctgggcttaggaatcca
gtacgtatcgcagtaaaggagaaaggagtggcggccaccagcacccagaaaacgccaaca
cgacttcagaattattatatgatgtgcaaagctgatgaaaagttcaactaccttgtgagt
ttcctgcgccaaaggaagcaagagaaacatcttgtgtttttcagcacctgtgcctgtgtg
gagtactacgggaaagcactagaagcttttgtgaagaatgtgaacgtcatgagcattcac
gggaaaatgaaacacaagcgtaacaggattttcaccgaatttagaaagctggaaagtggc
attttggtgtgtaccgatgtcatggcaagaggtatcgacataccagaagtaaactgggtt
ttgcagtatgaccctcccagcagtgcaagtgcttttgttcatcggtgtggacgtactgca
agaattggtaatcatggcaatgcacttgtatttttgctccctatggaagagtcatatgtc
aattttctatcaataaaccaaaagtgccctttacaagagatggctgacttcaaatgtact
gtggatcatcttccaaaattgcgatccatagcggaaagtgatcgcgcaatgtttgagaaa
ggcatgaaagcttttgtgtcttttgtacaggcttacgccaaacatgaatgcaacctaatt
ttcagagtcaaagatttggacttctccactcttgctcgtggttttgcactgctgaaaatg
ccccgaatgcctgaattgagaggaaaggacttttcagactttgtttccgctaacatcgat
acagactctattgcatacaaagacaaaaacagagaaaagcaaagacggaagatgttgcag
gagaaaaaagagaaacaggagggagaacgtagaaaaaactttgcaaaaaataaggcctgg
tcaaagcagaaagtcaaaagggaaaagaagaaaaagatggctcttaagagaaagcatgaa
gagggctctgacatagatgatgaagatgtgagtgagctgctacgtgataccaggctgttg
aaaaaactgaaaaagggtaaaatcacagaggaagaatttgagaagcagctgacggctgct
ggaagatctaggggtgaatcagatgcatcagactga
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