Bufo bufo (common toad): 120988731
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Entry
120988731 CDS
T07950
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
bbuf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120988731 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120988731 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbuf01009
]
120988731 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120988731 (SMARCB1)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120988731 (SMARCB1)
Protein phosphatases and associated proteins [BR:
bbuf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120988731 (SMARCB1)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120988731 (SMARCB1)
SWI/SNF complex
120988731 (SMARCB1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120988731 (SMARCB1)
PBAF complex
120988731 (SMARCB1)
SWI/SNF complex
120988731 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
120988731
NCBI-ProteinID:
XP_040272310
LinkDB
All DBs
Position
2:252824603..252848095
Genome browser
AA seq
378 aa
AA seq
DB search
MIMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERK
KIVASSHGKKYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR
NSQWVPTLPNSSHHLDAVPCSTTINRNRLGRDKKRTFPLCFDDHDPAVIHENASQPEVLV
PIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIES
YPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF
VTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD
QDRNTRRMRRLANTAPAW
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcgctgagtaaaacattcggccaaaagccggtgaaatttcagctggaagaa
gatggggaattttacatgatcggctccgaggtggggaactacctgcgcatgtttaggggt
tcactgtacaagcggtacccctccctctggagacgcctggccacagtcgaagaaaggaag
aaaattgtcgcctcttcacacgggaagaaatatcacgggtacacaacattagctactagt
gtcaccctgttgaaagcatcagaagtagaagagattcttgatgggaatgatgaaaaatac
aaagcggtttctattagcacagagcctccaacttacctcagggaacaaaaagcaaaaaga
aacagccagtgggttccaactctgccgaacagctctcaccacctggatgctgtgccctgc
tctactaccatcaatagaaaccgcttgggtcgtgacaagaagaggaccttcccgctgtgc
tttgatgatcatgatccagcagtgattcatgaaaatgcttctcagccagaggtgcttgtt
cctatccgactggacatggagattgatgggcagaaattgcgtgatgcctttacatggaac
atgaatgagaaattgatgactccagaaatgtttgcagagattctctgcgacgacctagac
ctcaaccctcttgcctttgtcccagctattgcttcagctatccgccagcagatagagtct
tatcctactgacagcattctggaagaccagtctgaccagagggtcatcatcaagctaaat
atccacgttgggaacatttccttggttgaccagtttgagtgggatatgtcagaaaaagag
aactccccagagaagtttgccctgaagttatgttcggagcttggcttgggtggcgagttt
gttaccactattgcatacagcattcgtgggcagctcagctggcatcagaagacttatgca
ttcagtgaaaaccccttgccaacagtggaaatcgctatccgaaatacaggtgacgcagac
caatggtgtcctcttctggagaccctcacagacgcagaaatggaaaagaagatccgtgat
caggacaggaacaccaggcgtatgagacgtcttgccaacactgcaccagcctggtaa
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