Bufo bufo (common toad): 120988903
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Entry
120988903 CDS
T07950
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120988903 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120988903 (THOC5)
03041 Spliceosome [BR:
bbuf03041
]
120988903 (THOC5)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120988903 (THOC5)
Spliceosome [BR:
bbuf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120988903 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
120988903
NCBI-ProteinID:
XP_040272614
LinkDB
All DBs
Position
2:complement(287772879..287823662)
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AA seq
689 aa
AA seq
DB search
MSSDAKKRKPKVFRSEEGKRSRHEEQEGRYYSEESEVDLRDPKKDYELYKETCEDLQRLM
AEIQDLKSKESKDASAEIEERRIQSCVHFMTLKKLNRLAHIRLKKSRDQTHEAKQKVDAY
HLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYREGPPEICKPEITSNDPHQQ
TLARLDWELEQRKRLAEKYKESLASKEKILKEIDIKKEYLNSLQPQLQSIMQASLPVQEY
LSMPFDCMHKQYETARHLPAPLYVLFVQAGAYSQACAHMKSYSQPYRQDKKLVVSIEGSV
EEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEILKRHPLCVSLIVKC
KDNSSLNLTCYFLMNLNILTVKAKVFPASELASSINAGELLNPDTVLSCLYPGDDGKKTP
NPANQYQFDKVGILDLSDYISELGHPYLWVQRMGGLHFPTDQPQPLVVADNTLSASHMEK
TIKLLRSRLLSRLSLHKQFASLEHGIIPVSVECQNLFPAKVVSRLTRWSMIPYEDYVMLP
YTKEIVECGLAQNTHLYYSLMIDRGTAKLHGAVVLNPGYCVIPPLFSLCLNWKGERSSRN
DENIRVMESEINVYYKELSGPSPGFQLLTNQLQRLCMLLDVYLETECHDNSVEGPHEFPP
EKICLRLVKGPSRMKPFKYNSPQGFFSHR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagatgccaagaagaggaagccaaaagtgtttcgcagtgaagaagggaagaga
agccgccatgaggagcaggaggggcgatattacagtgaggaatcggaggtagatttacga
gacccaaaaaaggactacgagctgtacaaggagacctgtgaagatctgcagaggctcatg
gctgaaattcaggatctgaaaagcaaggagagcaaagatgcgtctgcagagatcgaggaa
agacggatccagagttgtgtacacttcatgaccctgaaaaaactgaatcgcttggctcac
atccgcctaaaaaaatctagagatcaaactcatgaggctaaacagaaggtggatgcatat
catttgcagctgcagaacttgttgtatgaagttatgcaccttcagaaggagatcaccaag
tgtctggagtttaagtcaaaacatgaagaaattgaacttgtgagtgtggaagagttttat
cgagagggtcctccagagatttgcaagccagagattacatccaatgacccacatcagcaa
acattagctcgtctggactgggagcttgaacagaggaaaaggttggcagagaagtataag
gagagtttggctagtaaagagaagattctaaaggagatcgacattaagaaggaatatctg
aacagcctccagccacagcttcaaagcattatgcaggcttctttgccggtacaggaatac
ttatcaatgccatttgattgtatgcataaacagtatgagacagcacgacatctacctgca
cctctgtatgtgctgtttgttcaagctggcgcctacagccaggcatgtgcccatatgaag
agttactcccagccctataggcaggataagaagcttgtggtcagcattgaaggcagtgtt
gaagaagcaaaggccttatttaaaccacccgaggattctcaagatgatgaaagtgattct
gatgcagaggaggagcaaactacaaaacgtcggcgtccaacacttggggtgcagctagat
gataaaaggaaggagatattaaagaggcacccactctgtgtttccctcatagtaaaatgc
aaagataacagctctttaaatcttacttgctacttccttatgaacctcaatatactcact
gtgaaggcaaaagtctttccagcgtctgaactggcaagctccatcaatgctggtgagcta
ctgaaccctgacacagttctcagctgcctctaccccggagatgatggaaagaaaactccc
aacccagctaaccagtatcagtttgataaagtgggtatcttggatctgagtgactatata
tcagagcttggccatccctatctgtgggtacaaagaatgggaggactgcattttccaaca
gatcaacctcagccgttagtcgtagcagacaacactctaagcgccagccacatggagaag
accattaagttattgaggtcacggctattgtctcgtttatctctgcacaagcagtttgct
tctttagaacatggcattattccagtttctgtagaatgccagaatctctttccggcaaag
gtcgtatcccgtctaactagatggagcatgataccgtatgaagattatgtgatgcttccg
tatactaaagaaattgtggagtgtggcttagcacagaacacccatctttattattccctt
atgattgacagggggacagccaaacttcatggagcagtagttcttaatcctggttattgc
gtcatccctccactgtttagtctttgcctcaactggaagggtgagcgtagttccagaaat
gatgaaaacattcgagttatggaaagtgaaatcaacgtctactacaaagaacttagtggt
ccttccccggggtttcagttgctgacaaatcagctgcaaagactgtgcatgttgttggat
gtctatttggagaccgaatgccatgataacagtgtggagggtccacatgaatttcctcca
gagaagatatgtcttcgtttggttaagggacccagccgtatgaagcctttcaagtataat
tctccacaaggatttttcagccaccgctga
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integrated database retrieval system
