KEGG   Bufo bufo (common toad): 120988918
Entry
120988918         CDS       T07950                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
bbuf  Bufo bufo (common toad)
Pathway
bbuf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbuf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120988918 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbuf03041]
    120988918 (SF3A1)
Spliceosome [BR:bbuf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120988918 (SF3A1)
 Complex B
    120988918 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    120988918 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 120988918
NCBI-ProteinID: XP_040272637
LinkDB
Position
2:complement(289770814..289810970)
AA seq 803 aa
MPAGPVQLLAPQAPDGGQQQMEEEKKEDVIPSKPIVGIIYPPPEVRNIVDKTASFVARNG
PEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQQSVQ
QLPQKVQAQVVQETIIPKEPPPEYEFVADPPSISAFDLDVVKLTAQFVARNGRQFLTQLM
QKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLHIKLKKEAENPTEVLDQVRYR
VEWAKFQERERKKEEEEKERERVAYAQIDWHDFVVVEIVDFQPNEQGNFPPPTTPEELGA
RILIQERYEKFGESEEVEMEVESDDEEDAKNGKNEESSQMDQDTQVQDMDEGSDDEDYAQ
KAPLPPESPMPPPLPPTPDQVIVRKDYDPKASKPQPPAPASDEYLVSPITGEKIPASKMQ
EHMRIGLLDPRWLEQRDRSIREKQGDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGK
KIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPDEDGKDKIG
PSKPNEINQPPPPSAPTIPSSAPPMNSAPRPPPPVSLHQQINPPVSRPPTMPPPIRTTMV
SAVPIMQRPPMGSVVRLPPGSVLAAPMPPILHAPRINVVQMPPNPPPVMAQRAPHMIVPA
AFVPAPPVAPVPTPAPLPPSHPPPPMEDEPSAKKMKNEESLIPEDEFLRRNKGPVTVKVQ
VPNMQDKTEWKLSGQVQAFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYDGIFIKDSNSL
AYYNMQNGATIHLALKERGGRKK
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccggcgggacccgtacaattgctagcgcctcaggcgcccgatggagggcagcagcag
atggaggaggagaagaaagaagatgttattccatctaagcccatcgtgggaatcatctac
cctcctccagaggtccgcaatattgttgacaagacggcaagctttgtggcgagaaatggc
ccagagtttgaagccagaattcgccagaatgaaattaacaatcccaaatttaatttctta
aacccaaacgatccttaccatgcttactaccgtcacaaagtcaatgagttcaaagagggg
aaagcacaggaaccgtctgcagccattcctaaggtcatgcagcagcaacagtctgtacag
cagcttcctcaaaaggtccaggctcaggtcgttcaagagaccatcattccaaaggaacct
cctccagagtatgagtttgtggcagatccgccttctatatctgcctttgaccttgatgtg
gtgaaactaacagctcaattcgttgcacgtaacggtcgccaattcctcacacaacttatg
caaaaggaacagagaaattaccagtttgacttccttcggcctcagcacagtctcttcaat
tacttcaccaagcttgtggagcagtacaccaagatcctgattcctccaaagggattacac
atcaagctgaagaaagaggctgagaaccccaccgaggtgttagatcaggttcgttaccgt
gtagagtgggcaaagtttcaagagcgggaaaggaagaaagaggaggaggaaaaagaaaga
gagcgagtggcgtatgctcaaatagattggcatgattttgttgtggtagagattgttgac
ttccaacccaatgagcaaggtaactttcctcctccaacaacgcctgaagaattgggtgct
cgtattttaatccaagaacgatacgaaaagtttggagaaagtgaggaagtggagatggag
gttgaatctgatgatgaggaagacgctaagaatggcaagaatgaagaatcttctcaaatg
gatcaggatactcaagtgcaagacatggatgaaggctcagatgatgaggattatgctcaa
aaggctcctcttcctccagagtcgccaatgcctccacctttacctccaactccagatcaa
gtaattgttcgtaaagactatgatcccaaagcctctaagccacagccgcctgcacctgca
tcagatgagtatctagtatcgcctatcactggtgagaagattcctgccagcaaaatgcag
gagcacatgcgcattggacttttggatccacgttggctagagcagagagatcgctctatt
cgtgaaaaacaaggagatgatgaagtatatgctccaggattggatattgaaagcagcttg
aagcagctggctgaacgccgtaccgatattttcggtgttgaagaaacggctattggtaaa
aagattggagaggaagagatccagaaaccagaggagaaggtcacgtgggatgggcattct
ggcagcatggcacgtacgcaacaagcagcacaggcaaatataactctgcaggagcaaatt
gaagctatccataaggctaaggggttggtaccagatgaagatggcaaggacaaaattggt
cctagcaagcctaatgaaatcaaccaaccaccaccaccttctgcacctaccattcctagt
tctgcaccaccaatgaattctgctccaaggccacctccaccagtgtcacttcaccaacag
atcaaccctcctgtgtctcgaccaccaaccatgccaccacctatacgtactactatggtg
tctgctgttcctataatgcaaaggcccccgatgggatctgtggttcgtcttcctcctggt
tctgtattggctgctcctatgccaccaattttgcacgcacctaggattaatgtggtgcaa
atgccgccaaacccacccccagtgatggcacagagagcaccacacatgattgttccagct
gcatttgttcctgccccacctgtggcccctgtacctacaccagcgccactgcccccatct
catcctccaccaccaatggaagatgaaccatctgccaagaaaatgaagaatgaagagtca
ttaattccagaagatgagttcttgcgtaggaacaaaggtcctgtcacagtcaaagtacaa
gttcccaacatgcaagataagactgaatggaagctgagcggtcaagtgcaggcgttcact
ctgcctctctctgatcaggtctctgtaataaaggttaaaattcatgaagcaactggcatg
ccagctgggaaacagaaacttcagtatgatggtatctttattaaggactcaaactccctg
gcttactacaacatgcagaatggagcgacaatccacctggctttgaaagagagaggaggc
cgaaagaaatga

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