Bufo bufo (common toad): 120988935
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Entry
120988935 CDS
T07950
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03030
DNA replication
bbuf03410
Base excision repair
bbuf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120988935 (POLE)
03410 Base excision repair
120988935 (POLE)
03420 Nucleotide excision repair
120988935 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
120988935 (POLE)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120988935 (POLE)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120988935 (POLE)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
120988935 (POLE)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
120988935 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
120988935
NCBI-ProteinID:
XP_040272660
LinkDB
All DBs
Position
2:290489888..290615724
Genome browser
AA seq
2284 aa
AA seq
DB search
MVLQNSGKRTEPRGDGEGQQDDVSANSAAKRLERSQWTDKIDAQYGFERIKEPGEKTGWL
LNMHPTEILDEDKRLVSAVDYYFIQEDGSRFKVALPYKPYFYVATKKGCEREVSSFLSKK
FQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFHSVDDLIKVRKEISPAVRKNKERDNA
SDTYTAMLSSALTGNSFAPEEDGPSKKISDQMENIIDMREYDVPYHVRLSIDLKIHVAHW
YNIRYRGITSPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISTXIDGQ
GYLITNREIVSEDIEDFEFTPKPDYEGPFCIFNEPDEAHLIQRWFEHVQETKPNIIVTYN
GDFFDWPFVETRATIHEMSMLQEIGFQKDSQGEYKSPSCIHMDCLRWVKRDSYLPVGSHN
LKAAAKAKLGYDPVELDPEEMCRMATEQPQVLATYSVSDAVATYYMYMKYVHPFIFALCT
IIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQETVFNKLTNDGHVLDSETYVGGH
VEALESGVFRSDIPCRFKMNPAAFDFLLQRVELTLRHAIEEEEKVPLEEITNFQEVCDEI
KRKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEVTCAACDFNKPGATC
QRKMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPGKPPRAFHELTREEQAKYEKKRL
ADYCRKAYKKIRITRLEDRVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAF
ESGDAAEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANII
TQARELVEQIGRPLELDTDGIWCVLPNSFPENFVIKSNNAKKPKVTISYPGAMLNILVKE
GFTNHQYQELVDPSTLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDG
SLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAAN
MPDSELFELISENRNMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISRK
PDGSPVTERAIPLAIFQAELGVKRHYLRKWLKNPSLHDLDIRSILDWDYYIERLGSAIQK
IITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKRINELFTIQGKKQVTAQLQQPD
SSQTADIEDFGVGKRLQPTIPISTKRKRVPTAEESQGDSQDVALTQSWREVLGSPPPLGT
TKEERLLWLRYHKKKWEIQARQRKERQKKRRLDDGDAAPGAGGVVRETQAAGLGSFLRRT
ARSILDMPWQIVQIGESSQPGIFRLWAVIGSDLHCIKLNIPRIFYVNQRVPKTEDAVVYK
KVNRILPRSNTVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRSVVQLG
CVCMVNKQIVRHLSGREADTFELDHLEMKSLAQFSYLEPGSIRHIYLYHNCQGNKALFGL
FIPSQRKAAIFVVDTVRSNQMPNLSSMYTSEHTAMQERVDPELLPPEKHVFGSSSXDWIX
KTVYRAIQRLLVSYKGDERRGPTLIALQSNWSPKRLTSGMPVLEEFPLVPVHVTDDISYN
VLDWQRHGARRMIRHYLNLDSCLSQAFEMARYYHLPVGNLPDDVSTFGSDLFFARHLRRH
NHLFWLSPSSRPDLGGKEADDNRLVMEFDERASVEINNPGCYNTICVELDIQSLAVNSIL
QSHHINDLEGAGSIGISFDVLQQASLEDMVTGNQANSVASYDETALCSNTFRVMVVGWVK
EITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFSTVIAEFKRLGSSVV
YANFNRIILCTKKRRVEDAIAYVEYITQSIHTKEIXHSLTISFSRCWEFLLWMDPANXWR
DQGKATVQVHYGEVISXEEEIXGHEGEGSEEDEEDDTHAQSDSEQPEDQVEESLENNWNI
VQYLPQAASCQSYFLMIVSAYIVAVYHSMREELRRNAPGSTPIKRRQDSQVSQETVGESG
AMPGLITFSQDYVANELTQNFFTITQKIQKKVTGARHVTEPSEMFPVLPGSHLTLNNPAL
EFIKYVCQVLSLDSNITNQVNKLKRDLLRLIDVGEFSEDAQFQDPCRSYILPEIICKSCN
FCRDLDLCKDPSLSQDGSVLPQWVCSNCQTEYDTDNIEMSLVEALQKKMMAFMLQDLICL
KCKGVKEANMPVYCSCAGDFSLTFSMKVLMEQMDAFRNIAQHYQMPHLLETINWLIQRNS
HLIP
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagaacagcgggaagcgaaccgaacctcggggtgacggggaaggccagcaa
gatgatgtttcagcaaattcagctgctaagagactggaacgcagccagtggacggataag
attgatgctcagtatggttttgagcggattaaggagcccggtgagaaaacgggatggctg
ctaaacatgcatccgactgaaattcttgatgaggacaagcgtcttgtcagtgctgtagat
tattactttatacaagaagatgggagtcggttcaaggttgctctaccatataagccgtat
ttctatgtggccaccaaaaagggatgtgagagggaagtctcctcttttctttccaaaaag
ttccaaggaaagatagcaaagttggaaactgtacccaaggaagatctggatttgccaaac
catctggtgggactgaagcgaaactatatcaaattatcttttcattccgtggatgatctt
attaaagttaggaaagagatctccccagctgtgcggaagaacaaagagcgggacaatgcc
agcgatacgtacactgctatgctttctagtgctttgacgggaaacagttttgctcctgag
gaggatgggccctctaaaaagatatctgatcagatggagaacataattgatatgagagaa
tatgatgtcccttaccacgtgcggctttctattgatcttaaaatacatgtggctcactgg
tataacattagatatcgcggaatcacttcacccccagaaatcataagacgggatgacctt
gtggaaagaccagatccagtggttttagcttttgacattgaaactacaaagctgccactg
aagtttccagatgctgaaactgaccagattatgatgatctctacatgaattgatggacag
ggctatctaattacaaaccgggagattgtctctgaagacattgaagattttgagttcact
ccaaaaccggactatgagggccctttttgtattttcaatgagccagacgaggcacatctg
attcagcgttggtttgagcacgttcaagaaacaaagccaaatataatcgtgacctacaat
ggagacttctttgactggccctttgtggagacccgtgccacaattcatgagatgagcatg
ctccaagagattggctttcaaaaagatagccaaggggaatacaagtctccctcttgtatt
catatggattgtctcaggtgggtgaagagagatagttaccttcctgttggaagccataac
ctaaaggcagctgcaaaggctaagctgggctatgacccagtagagctggacccagaggag
atgtgtcgtatggctacagaacaaccacaggtgctggccacatactcagtatctgatgct
gttgcgacgtattacatgtacatgaagtatgttcatccctttatctttgcgctctgcacc
attatccctatggagccagatgaggtgttaagaaaaggctctggaactctgtgtgaggca
ttgctgatggtccaggcttatcatgccaatataatcttccctaacaaacaagaaaccgtg
tttaacaagctgactaatgatggccacgtgctggactctgagacgtatgtgggtggccat
gtggaagctttggagtctggcgtcttccgtagtgacattccttgccgtttcaaaatgaac
cctgctgccttcgatttccttctgcagcgcgttgagttgaccctccgtcatgctatagaa
gaggaggagaaagtcccattggaggaaatcaccaacttccaggaggtttgtgatgagatt
aaaagaaagttgaattctctgaaagaagttccaaatagaattgagtgcccactcatttac
catctggatgtcggggccatgtatcccaatatcattctcaccaatcgtttgcagccttct
gccatggttgatgaagtgacgtgtgcagcttgtgacttcaacaagccaggagccacatgc
caacgcaaaatgacttggcagtggaggggagagttcatgccagccagccgcagtgaatat
catcgtattcagcaacagttagaatctgagaagtttccccctctgttccctgggaagccc
ccaagagcatttcatgagctaacaagagaggagcaagcaaaatatgaaaagaagcgactg
gcagattattgtagaaaagcttacaagaagattcgtatcaccagactggaagaccgtgtc
actaccatatgtcagcgggagaactctttctatgtagatacggtgcgcgctttcagagat
cgtagatatgagttcaaaggactgcacaaggtttggaagaagaaattgtctgcagcattt
gaaagtggagatgctgccgagataaagcgatgcaagaacatggagattttgtatgaatcc
ctgcagctggctcacaagtgcatcctgaattccttctatggatatgtcatgcgcaaggga
gctcgctggtattcgatggagatggctggaattgtatgctatacaggagccaacattatc
actcaggcaagggagctggtggaacagatagggaggcctctggaattggacacggatggg
atatggtgtgttcttccaaatagttttccagaaaattttgtaatcaaatccaataatgca
aagaagccaaaagtgaccatatcctatccaggcgcaatgctcaatatcttggtgaaggaa
ggctttacgaaccatcagtaccaggagcttgttgatccctcaacactaacatacgtaaca
cgctctgaaaatagtatcttttttgaagtggatgggccatatcttgccatgatccttcca
gcatcaaaggaagaggggaagaagttgaagaaaagatatgctgtgtttaatgaggatggc
tcacttgctgagcttaaaggatttgaagtaaagagaagaggggaactgcagctgatcaag
attttccagtcctctgtgtttgaggctttcctaaagggaagtacgttggaggaggtctat
gcatctgtagccaaagtggcggattactggctggatgtgctttacagcaaggctgccaac
atgccagattctgagctgtttgaattgatctctgaaaatcgtaacatgtctagacgactt
gaggattacggggagcaaaaatctacgtctattagtactgccaaacgcttagctgagttt
cttggcgatcagatggttaaggatgctggacttagttgccgatacgttatatctcgcaag
cctgatggatccccagttactgaaagagctattcctttggcgatttttcaagcggagttg
ggagtaaagcgacattatctacggaagtggctgaaaaacccatctttgcacgatttagac
atacgctcgattctagactgggattactacatagagcgtctgggtagcgctattcaaaaa
attataaccattccagcagcattacagcaggtgaagaatccagtcccccgtgtaaggcac
ccagattggctacataagaaattacttgagaagaatgatgtctacaaacaaaaaagaatt
aatgaactgttcacaattcaaggaaaaaagcaagtcaccgcccaactgcagcaaccagat
tcctcacaaactgcagatattgaggactttggagtagggaaacgtctgcagcccactatt
cctatcagcacaaagagaaagcgtgtaccaacagcagaggagagtcaaggtgactcgcaa
gatgtagcacttacacagtcttggagggaggtcttgggttcacctcctccactcggcacc
acaaaggaagagagacttctttggttgcgttatcacaagaaaaagtgggagatacaggcc
cgtcagcgcaaagaaagacagaagaagcggagattagatgatggagacgcagcccctgga
gcgggaggtgtagtccgtgaaacccaagccgctgggttaggcagtttcctgcgtcgaacg
gctcgcagcatccttgacatgccttggcagattgtgcagattggggaaagcagtcaacct
ggaatcttccgcttgtgggcagtaattggcagcgacttgcactgtatcaagctcaacatc
cctcgtattttctatgtcaaccagagagtgcccaaaacagaggatgcagtggtgtacaaa
aaggtcaatagaatcttgccccgctctaacacagtgtataatttgtatgaatattctgta
ccagaggacatgtaccaggaacacatcaatgagattaatgctgatctgtctgcgccagac
atcgagggagtgtacgaaactcaagtccctcttctactgcggtccgtggtccagcttggt
tgcgtatgcatggtgaacaaacaaatagtccgccatttgtcaggtagagaagccgacact
tttgaattggaccatttggaaatgaagtccctggcccagttcagctacttggagccaggt
agcatcagacacatttacttgtaccacaattgtcaggggaacaaggctctctttggtctg
ttcataccgtcacagagaaaggctgccatatttgtggttgacacggttcgcagtaaccag
atgccaaaccttagcagtatgtatacaagtgaacacactgcaatgcaggaaagggttgac
cctgagcttttgccccctgagaaacatgtgtttggaagttcgagctgagactggatttaa
aaaaccgtttatagagcaattcaaagactacttgtgagctacaagggggatgagagacgt
ggtccaactctgattgcattgcagtccaactggtcccctaaaaggctaacaagtgggatg
cctgtcctagaggaattccctctcgtgcctgtacatgtcacggatgatatcagttataat
gtcctggactggcagcgccatggagcccgccgtatgattcgccactatcttaatttggac
agctgcctttctcaggcatttgagatggccaggtattatcaccttcctgttggcaacctg
ccagatgacgtgtccacatttggatcggatctgttcttcgcaaggcatcttcgacgacat
aaccacctcttctggctgtctccaagctctcgacctgaccttggaggcaaggaagcagat
gataaccgactagttatggagtttgatgagagggcatctgtggaaatcaacaatcctggc
tgttacaatacaatttgtgtggagcttgatattcagagtctggctgtaaacagtatcctg
cagtcacaccatataaacgacctggaaggggctggtagcattggcatcagttttgatgta
ttacagcaggcatcccttgaggacatggttacggggaatcaggccaattctgtggccagt
tatgatgagactgccctttgctctaacacattcagagtaatggtggtaggctgggtgaag
gaaattactcagtaccacaatgtgtatgccgataaccaagttatgcacttctatcggtgg
ctacggagtccatcctcactgctgtatgaccctgcgcttcatcgaactctccacaatatg
atgaaaaagctcttttctacagtgattgctgaatttaagcgacttggctcatctgtcgtg
tatgctaactttaatcgcatcatcctctgcactaagaagcggcgagtggaagatgccatt
gcttacgttgaatatattacccagagtatccacaccaaggaaatanttcactctcttacc
atctccttttcacgctgttgggagtttttgttgtggatggaccctgcaaactaatggagg
gatcaagggaaagctaccgtccaggtgcactatggagaggttatttcgtaagaagaagaa
atctgaggacatgaaggagagggaagtgaggaggatgaggaagatgacacacatgctcag
tcagacagtgaacagcccgaggatcaggtggaagaaagcttggagaacaactggaacata
gttcagtatttaccccaggcagcatcatgtcagagctacttcctaatgattgtctctgca
tacattgtagcggtttatcatagtatgcgtgaagagttgaggcgtaacgctcctggcagt
acgccaataaaacgacggcaggacagccaagtatcacaagagacagtgggtgaatctggg
gccatgcctggacttatcaccttttctcaggattacgtggcaaatgagcttacacaaaac
ttcttcacaatcacacaaaagatacagaaaaaagtgacaggagcacgccatgtaacagag
ccatctgaaatgttccctgttttacctggatcccatctgaccctcaacaatccggcttta
gagtttatcaaatacgtttgtcaggttctctctctggattcaaacataaccaaccaggtt
aacaaattaaagagggatctcttacgccttattgacgttggggagttctcagaagatgct
cagtttcaggatccgtgccgctcctatatacttcctgaaatcatctgtaaaagctgtaat
ttctgccgagatctggacttgtgcaaggatccgtctctcagtcaggatggatctgtgttg
ccgcagtgggtttgttcaaactgccagacggagtatgacacagacaacattgaaatgtca
ttagtggaagcgttgcaaaagaagatgatggcttttatgctacaggatttgatctgtttg
aagtgtaaaggagtgaaagaagcaaacatgccagtatactgcagctgcgcaggagacttc
agcctaacattttcaatgaaggtcctcatggagcagatggatgccttccggaatattgct
caacattaccagatgcctcatctcttggagaccatcaactggcttatccaacggaactct
cacctgatcccatga
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integrated database retrieval system
