Bufo bufo (common toad): 120988954
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Entry
120988954 CDS
T07950
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120988954 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120988954 (APEX1)
Enzymes [BR:
bbuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120988954 (APEX1)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120988954 (APEX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120988954
NCBI-ProteinID:
XP_040272701
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All DBs
Position
2:complement(295829636..295842640)
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AA seq
313 aa
AA seq
DB search
MPKRGKKDNLKSETEPSVQDEEPENKKGKKGGKEAEPVVLYDDAPDKLTTEDDKKYTLKI
SSWNVDGIRAWVKKNGLTWVREEDPDVLCLQETKCAEKALPADIKDMPEYPHKYWACSDE
KEGYSGVAMLCKEKPLDVTYGIGIEEHDKEGRVITAEFDSFYLVATYVPNSSRGLVRLDY
RQRWDVDFRAYLKGLDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQEREGFGALL
AEGYVDSFRELYPDKPHAYTFWTYMMNARSKNVGWRLDYFVLSKALLPALCDSKIRSKAM
GSDHCPITLYMAI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaggaaagaaggacaacctcaagagtgagacagagccttctgtgcaggat
gaggaacccgaaaacaagaaggggaagaagggaggcaaagaagccgagcctgtggtcctg
tatgacgatgcccctgacaaactgaccactgaagatgacaagaagtacacgctgaagatc
agctcctggaatgttgatggtatcagagcatgggtcaaaaaaaacggtttgacgtgggta
cgagaggaggatcctgacgtcctctgtcttcaagagaccaagtgtgctgagaaagctctc
cccgcagacattaaggacatgccggagtacccccataaatactgggcctgctctgatgag
aaagagggttatagtggagtggcaatgctttgtaaggagaagcctcttgatgtcacatat
ggcattgggattgaagagcacgacaaggagggtcgtgtaatcactgctgagtttgactcc
ttttacttggttgctacttatgttcccaactccagccgcggcctagtacggcttgattac
cgccagcgctgggatgtagatttccgtgcttatctaaaggggttggacagcaaaaagcca
ctcatcttgtgtggtgacttaaacgttgcacatcaggagattgacttgaagaacccgaaa
accaacaagaaaacccccggcttcactcctcaagagcgagagggattcggagcactgctg
gctgaaggctacgtagacagcttccgtgagctgtaccccgacaagccgcacgcttatacc
ttttggacttacatgatgaatgcacggagcaagaatgttgggtggaggctggattatttt
gtcctgtcaaaagccttgcttccagccttgtgtgacagcaagatcagaagcaaagccatg
gggagtgaccactgcccaataaccctttatatggccatatga
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