Bufo bufo (common toad): 120989185
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Entry
120989185 CDS
T07950
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120989185 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120989185 (SMARCA2)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120989185 (SMARCA2)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120989185 (SMARCA2)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120989185 (SMARCA2)
Chromatin remodeling factors
BAF complex
120989185 (SMARCA2)
PBAF complex
120989185 (SMARCA2)
GBAF(ncBAF) complex
120989185 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120989185
NCBI-ProteinID:
XP_040273048
LinkDB
All DBs
Position
2:355948874..356237991
Genome browser
AA seq
1579 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSNM
GPSDYTPENIHQMHKQPLESMHDKGVSDEMHCATMKSSSMRPPLAGMGPPQSPMDQHSQG
YMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPAQPGLMMQGEQQVISQPGRGPSAFSQVQL
HQLRAQILAYKMLARGQPLSENLQLAVQGKRTLPAIQQQPPPQAQQPPPQQAPSNYIRPQ
GMAMHPMSVTPSGAGPAPGMPGHVSTMALKPWGEGQTSDLNVPSTPQKLSVPPPSGRPSP
APPAASPSVALPGPSVPQPTPAPLVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARI
AHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKA
YKRNKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQ
KLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTD
EYVANLTSLVWEHKQAQAAKEKKKKRRKKKVEENAEGMGSGLGPDGELIDESSQMSDLPV
KVIHTETGKVLLAPEAPKASQLETWLEMNPGYEVAPRSDSEGSSSEYEEEDDDDESSRLD
SDEKKRLGLNAEGIVDNSAKQIIETAKQDVDDEYSLQADAEQSQSYYGVAHAIIERVEKQ
SSFLVNGSLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGP
YLIIVPLSTLSNWQYEFDKWGPTVVKIAYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIK
DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALL
NFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVE
SQLPEKVEYVIKCDMSALQKVLYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKI
CNHPFIFQHIEESFAEHLGYSNGIINGPDLYRTSGKFELLDRILPKLRATNHRVLLFCQM
TSLMTIMEDYFAFRSFLYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNL
QAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVD
QKVIQAGMFDQKSSGHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARHEEEFDLFMR
MDLDRRREDARNPNRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRLRRDVD
YSDALTDKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDVVVKDDGEKREKKRRGRPPA
EKLSPNPPKLTKQMNAIVDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKK
IKERIRNHKYRSISDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDE
SEEDSNEDDDEEDEDESESEAKSVKVKIKLNKKDEKNREKGKGKKRQGRVKAKPVVSDYD
SDEDQDENDQSEGSGSDDE
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccaacagatccgggggcaatgcctcacccgggaccatccccaggtcctggt
ccttccccggggccaattttaggacctagcccaggaccagggccttccccaggatccgta
cacagcatgatgggtccaagtccaggcccgcccagcgtctcccatccgctttctaacatg
ggcccgtcagattatacaccggagaacattcaccagatgcataagcagcccttggagagc
atgcatgataaaggagtttctgatgaaatgcactgtgctactatgaaaagctcaagtatg
aggccacctcttgctgggatgggtcctccgcagagtcccatggatcaacacagtcaaggg
tacatgtctcctcatccatcacctttgggggctcctgaacatgtatctagcccaatgtct
ggtggagggccaacaccaccacagatgcctccagcacagcctggactcatgatgcaagga
gagcaacaagttattagtcagcctggtcgtggtccctctgctttcagccaggttcaactt
caccagttgcgtgctcagattttggcttacaaaatgttggcaagagggcagccgttgtca
gaaaatctgcaacttgctgtacaaggaaagaggaccttgcctgcaattcagcaacagcca
ccaccacaagcacaacagccaccaccacagcaggctccttctaattacattcgaccacaa
ggtatggcaatgcacccaatgagtgtcactccttctggtgcaggacctgcacctggaatg
cctggacatgtttctacaatggctttaaagccctggggagaaggtcaaacttctgatctc
aatgtcccaagtaccccacagaaactttctgtgccaccgccaagtggcagaccatcgcca
gcaccacctgcagcttcaccctctgttgctttgcctggtccatcggttccacagccaaca
cctgctcctcttgttcaactccagcaaaaacagaaccgaataagtccaatccagaagccc
cagggcttagatcctgttgaaattctacaagaaagagaatacagacttcaggctcgtatt
gcccatcggatccaggaactggaaaacttacctggctctctgccacctgatctgagaaca
aaagctacagtggagttaaaagctctcagacttctaaacttccagcgacagctgagacag
gaggttgtggcgtgcatgcgtcgggataccacacttgagacagcccttaattccaaggct
tacaagagaaataagagacaaactctccgtgaagcccgtatgactgagaaacttgaaaag
caacagaaaattgaacaagagcggaaacggagacagaagcaccaggagtatctcaacagt
atattgcaacatgctaaagacttcaaagaatatcacaggtcggtcaccggcaaaatccag
aaactttcaaaggctgttgctacatggcatgccaacactgaacgagaacaaaagaaagaa
actgaacgaattgagaaagaaagaatgagaagattgatggcagaagatgaggaaggctac
cgtaagcttattgaccagaaaaaggatcgtcgtctggcctacctcctccaacagaccgac
gagtatgtggctaatcttaccagtttggtttgggagcataaacaagctcaggctgccaag
gagaaaaagaagaagagaaggaagaagaaggtggaagaaaatgcagaaggaatgggatct
ggtcttgggcctgatggagagctaatagatgaaagcagtcagatgagcgacctacctgta
aaggttattcatacggagacagggaaagtgctgcttgctccagaagcacctaaagccagt
cagcttgagacttggctggagatgaacccgggatacgaagtagctccgagatctgacagt
gagggaagtagttcggagtatgaagaggaggatgatgatgatgaatctagcagactggac
tcagatgaaaagaaacgtttgggtctgaatgcagagggcattgtggataacagtgcgaag
cagataattgagactgcaaagcaagatgttgatgatgagtatagtttgcaggctgatgcc
gaacaatctcagtcatattatggagtggctcatgcaatcatagaaagggtggagaagcaa
tcatcctttctcgtcaacggttcccttaagcattaccaggtccagggcttggaatggatg
gtttctctctataacaacaatttaaatggaattcttgctgatgaaatggggcttggaaag
acaattcagactattgcactcataacctatctgatggagcacaaaagacttaatggcccc
tatctcattattgttccactctcgacattatcgaactggcagtatgagtttgataaatgg
ggtcctactgtggtgaagatcgcttacaagggaactcctgcaatgagacgctctctggtc
ccacaactcaggagtggaaaattcaatgtcctcttgacaacctacgaatacattattaaa
gacaagcacatccttgcaaagatacgatggaagtacatgattgtggatgaaggccatagg
atgaagaatcaccactgcaagttaacacaagtcttgaacacccattatgtggctccaaga
cgtattcttctaactggcacaccactccagaacaaactgcctgagctttgggccctcttg
aatttccttttgcccactatctttaaaagctgcagtacttttgaacagtggttcaatgct
ccttttgccatgacaggagagagggtggatttgaatgaagaagaaactatattgatcatc
cgccgtctgcataaagtgctacgccccttcttgttgagacggttgaaaaaagaagtggag
tcgcagttaccagagaaggttgaatatgtaattaaatgcgatatgtcagccctccagaag
gttctatatcgccatatgcaagcaaaaggtattctccttaccgatggttcagaaaaagac
aaaaagggaaaaggtggcgccaagactctaatgaataccatcatgcagctgcgaaagatc
tgtaaccaccctttcatatttcaacacattgaggaatcctttgctgaacatctgggatac
tctaatgggatcatcaacgggcctgatctctacagaacttcaggaaagtttgaattactt
gatcgaatactaccaaagcttcgagccacaaatcacagggttttgctgttctgtcagatg
acttcactcatgactatcatggaagactactttgcttttcgaagcttcctttaccttcga
cttgatggcacaacaaagtcagaggatcgtgctgcattgctaaagaagttcaatgaagaa
ggctcacagtactttattttcttactgagtaccagagctggaggcttggggttgaacctc
caggctgcagatactgtcgttatttttgacagcgactggaatcctcatcaggaccttcag
gcacaggacagagcgcacaggattggtcaacagaatgaggtgcgcgtgttacgtctgtgc
accgttaacagtgtggaggagaagattcttgcagccgctaaatacaagctgaatgttgat
cagaaagtcattcaagcgggcatgtttgatcagaaatcttcaggccatgaaagaagggca
tttctgcaagccattctggaacatgaagagcagaatgaggaggaagacgaagtccccgat
gatgagaccctgaatcagatgattgcacgccacgaggaagagtttgacctgttcatgcga
atggatctagatagacgcagagaggatgctcgaaatccaaaccgcaagccacgtttgatg
gaagaagatgatcttccctcctggatcattaaagatgacgctgaagttgaacgtctcact
tgtgaagaggaagaggagaaaatatttggcagagggtcacgcctgcgtagggatgtggat
tacagcgatgctcttacagataagcagtggcttagggctatcgaggacggaaatttggag
gaaatggaagaggaagtccggctgaaaaaacgcaagcggcgaagaaacgtggacaaagat
gttgtggtaaaagatgatggagaaaaacgcgagaaaaaaagaagaggccgtcctccagct
gaaaagttatccccaaacccacctaaactaaccaaacagatgaatgcaatagttgacacc
gtaataaactacaaggacagctctgggcggcagctaagtgaagttttcatacagctccca
tctagaaaagagttaccagaatattatgagttaatccgcaaaccagttgactttaaaaag
ataaaggaaagaattcgcaatcataaatacagaagtataagtgacctagaaaaggatgtc
atgctgctctgccacaatgcacagacattcaatctagaaggatcccagatatacgaggat
tctattgttctacaatcagtcttcaagagtgcaagacaaaaaattgcaaaagaagatgag
agtgaagaagacagcaatgaggacgacgatgaggaggatgaagatgaatcagaatctgag
gcaaaatcagtgaaagtaaaaatcaagctgaataaaaaggatgaaaagaatcgagaaaag
ggaaaaggaaagaaacgccagggtcgtgtcaaagctaaaccagttgtcagcgactatgac
agtgatgaagatcaagatgaaaatgatcagtcggaaggaagcggaagtgatgacgagtga
DBGET
integrated database retrieval system
