Bufo bufo (common toad): 120989214
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Entry
120989214 CDS
T07950
Symbol
FREM1
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120989214 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bbuf04091
]
120989214 (FREM1)
Lectins [BR:
bbuf04091
]
C-Type lectins
Lecticans
120989214 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
120989214
NCBI-ProteinID:
XP_040273101
LinkDB
All DBs
Position
2:complement(372294146..372538821)
Genome browser
AA seq
2172 aa
AA seq
DB search
MNLFWGCRMYPSLAFIVVTLRFVSSSFIKVNNGITVMKGQVGYLSENDLQFFSPKEKDAC
KLEIVVNEPITQRVGKLSPQVFDCHFLNNEVQYIHYGCPILDEDEVMLRLYRFTETQTFT
ENFILRVKLVEPDCNIIKLGPKKLEVTEFYGLSNIIDKNTLNFDYEKRLNLECTVRVSSL
ESHLPAHGQLVTGDPVKDQPRGDHPHSYLSRTNHKLSPLCKSGGCIQGLKKLQNTIKASC
EEFLLMGVRYQHLDPPSPNIDYISIRLDLTDTRSKALYKSEHAWIPIHIRDALPNQIPKA
AFMSMFILEVDQFILTPFTTAALDAEDSETSKPLLVFNITVPPHKGFITHLSDHTKPITS
FTWKDLNDMLIAYQPPNSSHVERRNIEVELEVHDFFFERSSPITVYISVRTADTNAPRVS
WNMGLDLLEGQSRAMTWEQFQVVDNDNINAVRLVILDGLHHGRITLRGGKGFMFTIKDIQ
DGVVCYHHDDSDTTKDFVVFRIFDGRHSIRHKFPINILPKDDSPPFLITNTVIELLEGQT
VLIQGSMLCASDMDSSDDYIRFNITKQSVAGSIMKKPGQNALAYPVTTFLQRDLFNGIIY
YQHLGGEFFEDSFEFILCDSHTPPNLSGPQAVIIHITPVDDQLPKEVPGTIRHLIVNETD
VVHITKKQLHFIDTESPERELIYTVTKPPCRSSSFSSDLDAGKIFLADSIQKFVKDHSAT
TTSTFSQHAVSHMKVAYMPPMEDIGPDILHVSLTLSVSNQHGGTLYGICFNITILPVDNQ
PPQVLAYDLRVEEGSSHPLTVEHVYISDKDTNQDKLRITLQAAPLHGTIQLDGRPINEGE
QFRYLDFSMLKVRYQHDGSETLEDEIKCIATDGINSAEFLLKIQVLPVNDEPPVMKDNLL
PTIYCSEGDGVVLSSDYIYAVDADSDDTKLMFMIARQPRWGIIQKNGVTIDRFSQRDVLE
GVVIYKHTSGEIGLQPCYDIITLVISDAELDADVNNCCSNGPLHPLVPNHDSFPVYDLNI
TVFPVDNQSPSITIDDIFTVNEGKSCTITVSHLHASDPDTDNNYLKFVLVSPPRYGYIEN
ILPSPGFEKSNMGISIDSFTLKDIISQNINYVQSRHHRIEPTADQFTLYVTDGKHHSLEK
PFYIIINPTNDEVPEFMARNITVEEGQMRELDPSVINVSDMDVPQNYLSFTVTVHPHHGL
LIEEGFGVDQIRQLLSKSGKNSTVPMVYDFEMEQLRNGMKLAYVHDDSENLADSFTIRLS
DGQHEVERTIFVTIIGVNDEKPVLTKHCEVVLSLGENYIISSAVLSAEDKDTPREEIYYI
IDQTPGQGELQMKVHEKWINLNTGMKCSQDDIDMNLIRYVHRGTLGSKNEDSFTFHLWDG
RNRSPELQFHILVKDMEKGDIAVFVKTLHVSRGDRVILSTNVLLATDGTDKPEELLYVVV
SPPQYGQIEYANHHGIPITSFSQMDVAAQTVCYVHNGKAAAAADTFKFLVSNGLRTKHGT
LDIAVEMVDKTLPTLCKNYGLRQVKGSMALITTEILQATDPDTSLENITFLMXQPPQYGQ
IYLRGGTNXRRATLTQKDIENMDVAYRHGGQDAQIDKLTFLVMDKTNKGFIMDGKVQMNP
VPFIIQVDFPDDTSPRIVHLYCAAQIQLLDDDRYGIYITSREIKAIDPGTEEEKIIFKIL
RAPQRGYLENVVSGDFISDQFTQKDLSSKSLLYVVNPSVDVYEDSVEFEVTDPSGNRAAP
QILEIKWSHVELLQDMYEVCETEALVSLKITRWGYSVDSAFISLQVNGVSAVDGKDFSSS
SSRLIQFDPGVSTRTWNIAITQDGLEEDDETFEVILNSPVNAVLGTNTRAVVKIVDPRGG
ICHLGKVKSTVTNCTNKPVHLQCSHSLGESPRPNLKGEEGVIRGDVLEEFSPTQNEKKRL
RLVGNGKSVKPSSVHHNGTDTIYTYHGIVSLRLEEERINSSKVARLSVTNHGQPRMEAAS
RRADHLQSDRALVTTDSSAAKKKTSQFPKECTPGLRGLLHFDQKSQKLFQCDGSSWNTWV
PTAKATKCPFGWTPHDSSCYKHITEQKAMWITAARICREEYHATLVDIFTKEQMDWLWNF
SGRKSFWIGLNDRVNHGKWEWSNGEKAAYTNWKRSPPPRSKKGRNCVSVQKKGKWQVKSC
RKTYYYICSKNM
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttttggggatgtcgcatgtatccatcacttgcttttatagtagtgactttg
aggttcgtaagctcttcctttatcaaagtcaataatgggatcacagtgatgaaaggacag
gttggctacctatcagaaaatgacctacagttcttcagccccaaggagaaagatgcctgc
aaactggaaattgttgttaatgaaccgattacccagagagttggaaagttatctccgcag
gtatttgattgtcattttttgaataatgaagtccagtacattcactatggctgccctata
ttggatgaagatgaagtcatgcttcgactttacaggtttacagaaactcaaacattcaca
gagaacttcatattgagggtgaaattagtggaaccagactgtaatattataaagctggga
cctaagaaattggaagtcacagaattctatggactatcgaatatcattgacaagaacaca
ctgaattttgactatgaaaaaagattgaatctggaatgtactgtccgggtgtcttcttta
gaatctcatttgccagctcatggtcaacttgtcactggagatcccgtgaaagaccagccc
cgaggggatcatccacacagctacttaagtagaaccaaccataagctaagtcctctgtgc
aaaagtggaggctgtattcaagggctaaaaaagttacagaacacaataaaagccagctgt
gaggaatttcttcttatgggggtgcgataccagcatttagaccccccatccccaaatatt
gactacatcagtatcagattggaccttactgacacccggagcaaagctttgtacaagtct
gaacatgcatggattcccattcacattcgagatgctttacccaatcagatccccaaagca
gccttcatgtcaatgtttattttagaagtggaccagttcatcctcactcccttcaccact
gcagcacttgatgcagaggacagcgaaacaagcaaacccctgctagtcttcaacatcaca
gtccctcctcataaaggattcattactcatcttagtgatcataccaagcctattacatcc
ttcacatggaaagatctcaatgacatgctcattgcatatcaaccaccaaacagcagtcat
gttgaaagaagaaacatagaggttgaattagaagttcatgatttcttttttgaaaggagc
tcaccaatcacggtttacatatctgttagaacagctgacacaaatgcccctcgggtatcc
tggaatatggggctggatctcttggaaggtcagtctcgagcaatgacatgggaacaattt
caagtagtagataatgacaacattaatgcagttcgcctagtgattttggatggcttgcac
catggaaggataactctaagaggaggaaaaggattcatgttcaccattaaagacatacag
gatggagttgtctgctatcaccatgatgacagtgacactaccaaggattttgttgtgttc
aggatatttgatggacgtcacagcattcgccacaagttcccaattaatatccttcctaaa
gatgacagcccaccttttctcatcactaacacagtcattgaactcttggaaggacagact
gttctcattcaaggctcaatgctatgtgcctctgacatggactccagcgatgattatatt
cgcttcaatatcactaagcagtcagtggctggaagcatcatgaagaaaccgggacagaat
gccttagcttatcctgttaccactttcctacaaagagacttattcaatggcatcatttac
tatcagcatcttggaggagaattttttgaagattcatttgaatttatcctatgtgatagt
catacccctcctaacctgtctggtcctcaggctgtgattatacatataacaccagtggat
gatcagttaccaaaagaggtccctggaacaattcgtcatctgattgttaacgaaactgat
gttgtccatataacaaagaaacaactacattttatagacacagaatctccagaaagagaa
cttatttacactgtaactaagcctccatgccgatcatcatccttttccagtgacctagat
gctggaaagatatttcttgcagacagtatacagaaatttgtaaaggatcattctgctacc
acaacatcaactttcagtcaacatgcagtgagccacatgaaggttgcatatatgcctccc
atggaagatatcggtcctgatattctacatgtcagccttaccttatcagtcagtaatcag
catggaggtaccttgtatggtatctgcttcaatatcacaatacttccggtagacaaccaa
ccgccacaggtattggcatatgatctgagagtggaggaaggcagctcccatcccttaact
gtggaacatgtttatatcagtgacaaggacacaaatcaagacaagcttcgtatcactttg
caagcagcaccgttacatggaacaattcaactagatggcagaccaattaatgaaggagaa
caattccgctacctggacttcagcatgttaaaagttaggtaccagcatgatggttcagag
accctagaagatgaaattaaatgtattgctacagatggtatcaactctgctgagtttctt
ctaaaaatacaggttttaccagtaaatgatgagccaccagttatgaaggacaacctctta
ccaacaatatactgttcagagggagatggagtggtcctttcaagcgactatatctatgct
gttgatgcagatagcgatgatacgaaactgatgtttatgattgcacgccagcctcgctgg
ggcattatccagaagaatggagtcaccattgaccggttctctcaaagagatgttcttgaa
ggagttgtgatctacaagcataccagtggagaaattggattgcaaccttgctatgacatt
ataacccttgttatctcggatgctgaattggatgctgatgtgaacaactgctgctctaat
ggaccccttcacccgctagtgcccaatcatgactcttttccagtgtatgacctaaatatc
actgtttttcctgtggataaccaatcaccatcaatcacaatagatgacatatttactgtg
aatgaaggcaaatcatgtacaattactgtaagtcacttacatgccagtgaccctgacaca
gacaacaattatttgaaatttgtacttgtttctcctcctcgatatggctacattgaaaat
attctcccatctccaggttttgagaaaagtaacatgggaataagtattgattcatttaca
ttgaaggacatcatatcacaaaatataaactatgtccagtcgagacatcaccggattgaa
ccaactgcagatcagtttactttatatgtcactgatgggaaacatcactctctggagaag
ccattttacatcataatcaacccaacaaatgatgaagttccagaatttatggccagaaat
atcacagtggaggaaggccaaatgagagaacttgatccttcagtaattaatgtgtcagac
atggatgtcccccagaattacttatcatttactgttacagtacatcctcatcatgggtta
cttattgaagaaggttttggagtagaccaaattagacaactactttctaaaagcggcaaa
aatagcaccgttcctatggtttatgacttcgaaatggaacaactcagaaatggtatgaag
ctagcatatgtgcatgatgactctgaaaaccttgctgacagcttcacaatccgattgtcg
gatggacaacatgaagtggagagaaccatctttgttacgatcattggggttaatgatgaa
aaaccagtccttacaaagcactgtgaagtagtgctgagcctgggtgaaaattacattatt
tcaagtgctgtactgtcagctgaagataaagacactcccagagaagaaatttactacata
attgaccaaactccaggccaaggagaacttcaaatgaaggtacatgaaaagtggataaac
ttaaatactggaatgaaatgtagtcaagacgacattgatatgaatctgatcagatatgtc
cacagaggaacacttggttcaaaaaatgaagacagctttactttccacctgtgggatggc
aggaacaggtctcctgagctacaatttcacatcctagttaaagatatggagaagggagac
attgcagtatttgtgaaaacacttcatgtgtcaagaggagaccgggtcatcttaagcact
aatgttctcctggccactgatggcacagacaagccagaagagctgctatatgtagtcgtc
tccccgccgcaatacgggcagattgaatatgccaaccaccatggaattcccataacaagc
ttcagtcagatggatgtggccgctcagactgtctgctatgtccacaatggcaaagctgca
gctgctgctgatacgttcaaattccttgtcagcaatgggctgcgaacaaaacatggcact
ctggatatagcagtggagatggtagacaaaactcttccaacgctgtgcaagaattatggt
cttagacaggtgaaaggatctatggcattgatcaccacagaaattcttcaggcaactgac
ccagatacatcactggagaatattacctttctgatgngtcaacctccccagtatgggcaa
atatatttaagagggggcaccaactgaaggagagcaactttaacccagaaagatattgaa
aatatggatgttgcctacagacatggagggcaggatgctcagattgacaagttaacattt
cttgttatggataaaacaaataaaggatttataatggatggaaaggtgcagatgaatcca
gtgccgttcattatacaggttgattttccagatgataccagtcctagaattgtccacctt
tactgtgcagcacaaattcagcttctcgatgatgatcggtatggaatctacataacatct
agggaaataaaggctattgatccagggacagaggaggaaaaaattatctttaaaatatta
agagctcctcagaggggatacctggagaatgttgtatcaggcgattttatttcagaccaa
ttcacgcagaaggacttgagcagcaaatctttattgtacgtagtaaacccatcagttgac
gtctatgaagattcagtggaatttgaagttacagatccatctggaaacagagctgcacct
caaatcttggaaataaaatggtctcacgttgagttgctccaggacatgtatgaggtgtgt
gagacggaggcactggtgtctttgaagataacacgctggggttactctgtagactctgct
ttcatttcactacaggtaaatggagtaagtgctgtggatggaaaagatttttcttcaagc
tcttcaagactaatccagtttgacccaggagtgtcaaccaggacgtggaatatagcaatt
acccaagatggattagaagaggacgatgagacctttgaagtgattctaaattctcccgtg
aatgccgttcttggcactaatacaagagctgtagtgaaaattgtggaccccagaggagga
atttgccatttagggaaggtaaaaagtactgtgacaaactgcaccaataagccagtacat
ctacaatgtagccatagcctgggagaatctccacgtcctaacctaaaaggggaagaagga
gtcatcagaggagatgtgctagaagaatttagccctacacagaatgaaaagaaaagactc
aggcttgtcggaaatggaaaatcagtaaaaccatcatctgtgcaccataatggaactgac
accatttatacatatcatggcatagtgtcacttagactggaagaagagagaatcaactcc
agcaaggtagccaggttatcagtgacaaaccatggtcagccaaggatggaagctgcatcc
cgaagggcagatcatctacagtcagacagagctctggtgaccactgattcttctgctgca
aaaaagaagacatcgcaatttccaaaggaatgtactccagggttgagaggacttctgcat
tttgatcaaaagagccaaaagcttttccagtgtgatggttcatcatggaatacctgggta
cctacagccaaggcaacaaaatgtccatttggctggactccacatgacagcagctgctac
aaacatatcactgagcagaaggccatgtggatcaccgccgcccggatatgtcgggaagaa
tatcatgctacacttgtagacatattcactaaagagcaaatggattggctgtggaacttc
agtgggaggaaatctttttggatcggactcaatgatcgagtaaaccatggcaaatgggaa
tggagcaatggagagaaggctgcatacactaactggaaaagaagtccacctccccggtca
aaaaaagggagaaattgtgtttcagtacaaaaaaaagggaaatggcaggtcaagagctgc
cggaaaacgtattattatatatgctcaaaaaatatgtaa
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