Bufo bufo (common toad): 120989286
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Entry
120989286 CDS
T07950
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03013
Nucleocytoplasmic transport
bbuf03015
mRNA surveillance pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120989286 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
120989286 (NCBP1)
03015 mRNA surveillance pathway
120989286 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120989286 (NCBP1)
03041 Spliceosome [BR:
bbuf03041
]
120989286 (NCBP1)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
120989286 (NCBP1)
Spliceosome [BR:
bbuf03041
]
Common components
Common spliceosomal components
Cap binding complex
120989286 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
NOCA1_mid
Aconitase_B_N
Cob_adeno_trans
LUC7
DUF2524
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
120989286
NCBI-ProteinID:
XP_040273221
LinkDB
All DBs
Position
2
Genome browser
AA seq
791 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRSKMSEPFDIEHRIESLIFRVGEKSTSSLESNLEGLAGVLEAD
LPNYKSKILRILSTATRNLPLKMTVYTTLVGLLNARNYNFGGEFVEAMLRHLKEAIKSEA
YIEAAYLVRILSDLVNCHVISAPSMVALFESFVGVAQEEDIPQVRSDWYIYVVLSSLPWV
GKELYEKKDVEMDRILSQIENYLKQRQKIHFPVLKVWSADKPHPQEEYLDCLWSQIQKLK
KDRWQERYILRPYLAFDSILCEALQHNLPPFTPQPHAKDSVYPMPRVIFRMFDYTDAPEG
PVMPGSHSVERFIIEENLHWIINSHWRERNTCAAQLLSYPGKNKIPLNYHIVEVIFGQLF
QIPVPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYTRLDTMNVTCIDRFVNWFSHH
LSNFQFRWNWEDWADCVSQDLDRPKPQFVREVLEKCMRLSYYQRILDIVPSTFSALYPAE
PKCKFKYGDESSSALPGYAAAINLTNAIKNKAVSEDVFSLLKDVPNPNQDDDDDEGMSFN
PLKIEVFVQSLLNLASKSFSHSFSAIAKFHDVFKALSDTEEGKLHILRVVYDVWKNHPEM
IAVLVDKMIRMQIVDCAAVANWIFSPEISPDFTRLYIWEILHSTIRKMNKHVQKIQKELE
DTKQRLAKQHKRRENDDDDGGREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMIL
TEHLVRCETGGIDVITPWYKNCIERLQQIFLLHHQIIQQYMVTLENLLFTGELDHHILTV
FQQFCSLQAKW
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggagaaggcacagcgacgagaatgatggcgggcaacctcataaaaggagtaaa
atgtccgagccctttgatatagaacatcgtattgagtcactgatatttagagtgggggaa
aagagtacctcatcattggaaagtaacctggaaggactggctggtgttttggaggctgac
ctgcccaactacaaaagcaagatcttgaggattctttctacagccactcgcaatctgcct
cttaagatgactgtttacacaacactagtgggcctgctgaatgcaagaaactacaatttt
ggtggagaattcgtagaagctatgctccgtcacctgaaagaagccataaagtccgaagcc
tatatcgaggcagcatatcttgtccgcattttatcagatcttgtgaattgccatgttatc
tcagccccctccatggtagcattgtttgaaagttttgttggggttgcacaggaagaagat
atacctcaggttcgatctgattggtatatatatgtcgttctttcttccttgccctgggtt
gggaaagaattgtatgaaaagaaggatgtagagatggaccgtattttatcacagattgaa
aactacctcaagcaacgtcaaaaaatccattttcctgtgttaaaagtatggtcagcagat
aagcctcacccacaagaggagtacctggattgtctttggtcccagatacaaaagctgaag
aaagatcgctggcaggagagatacatattgcgcccataccttgcttttgatagcatattg
tgtgaagccttgcaacataatttgccaccctttacaccacaacctcacgcaaaggattct
gtctatcccatgccaagagtcatattcaggatgtttgactacacagatgctccagagggc
ccagtgatgcctggatcacattctgtagagcgatttattatagaggaaaatctgcactgg
atcattaattcacactggagagaaaggaacacctgtgctgcacagcttctcagctaccct
ggaaagaataagatccccttgaactatcatattgtggaggtgatctttggacagttgttt
cagattccagttccaccacatatagatgtcatgtacacaacattgttaattgagctttgc
aagctacaaccaggatccttgccgcaagtgcttgcccaagctactgaaatgttgtacact
cgcttggatacaatgaatgtaacttgcattgacaggttcgtaaattggttttcccaccac
cttagtaactttcagtttagatggaattgggaagattgggcagattgtgtttcacaggac
ttggataggcctaaaccccagtttgttcgggaagtcttggaaaaatgcatgagactttct
tactaccaacggatattggatattgtaccttcaaccttttctgcattgtacccagctgag
ccaaaatgcaaattcaagtatggtgatgagagcagcagtgctctgcctggatatgctgct
gctatcaacttgaccaatgctataaaaaacaaggcagtcagcgaagacgtatttagtctt
ttgaaagatgtaccaaaccctaaccaagatgacgatgatgatgaaggtatgagctttaac
ccgctgaaaatagaggtgtttgttcagtccctgctcaatttggcctcaaaatcctttagc
cattcattcagtgctattgcaaagtttcatgacgtatttaaagctctatctgacactgag
gaaggaaagctccatattctgagagtggtttatgatgtctggaaaaatcaccctgagatg
attgcagtgcttgttgataaaatgatccggatgcaaattgtcgactgtgctgctgtagct
aactggatcttctcccctgagatatcacctgattttactaggttatacatttgggaaatt
ctgcactccacaattagaaaaatgaataaacatgtccagaaaatccagaaagagttggag
gatactaagcagcgactggccaagcaacacaagcggagagagaatgacgacgatgacggc
ggaagggaggatgggcccctggaagagcaaattgagcgcttacaagaaaaagtagagtcc
gcacaaagtgaacaaaagaaccttttccttgtaattttccagcgttttattatgatactg
acagagcacttagtccgctgtgaaacagggggcattgatgtgattactccatggtacaag
aactgcatagagagattgcaacaaatctttctgttgcatcatcagataatccagcagtac
atggtgactttggagaacctgttgtttaccggagaactggaccatcacattctgaccgtc
ttccagcagttctgttcattgcaggctaaatggtag
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