Bufo bufo (common toad): 120989330
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Entry
120989330 CDS
T07950
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
120989330 (RNF38)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120989330 (RNF38)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120989330 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120989330
NCBI-ProteinID:
XP_040273300
LinkDB
All DBs
Position
2:422600350..422974773
Genome browser
AA seq
720 aa
AA seq
DB search
MPIASGSGQPSAQDSGCFSHCHPADRLRDPKQQQPAGGGDGGGGGGGGGGLLPFQICLNP
RQAEAGAEATAATSREAGLSSTLLAAPPQHPLLVQVTPSFTSPSSFFQALSSASSPPSSP
LPPAAPSFLFPAFLEPPRTRSRSRSGFIMNQQHQLHGLPGVTHFHHHQLQTPPPYLISTA
LHGPGMDRNDNNPPEGARQPHSPPVVARRRVNSPTTNEHHHHHYHHHHIRPPPGHLGPSF
QCQPVHHDHIRNDDSEKNEDSPSPKRQRLSNSVFDYAAPSPAPSPPMRPWEMSSNRRPPS
ARPNQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLSYGQQPAVEE
PRAFHPPNVSPRMLHPAAHAQQQNAVMVDIHEQIHQGAVPVSYTVTTVAPHGIPLCTGQH
IPACSAQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLLSSDPFLLHPP
HLSPHHHAHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPPAHAPTLQP
SAPLQFITHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLP
VPPTVGPAFSFELDVEDGEVENYEVGALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN
HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccaattgcctccggctcaggacagccctctgctcaggactccggctgctttagccac
tgtcacccggcagacaggctacgggaccccaagcagcagcagccagcaggaggcggtgac
ggcgggggtggtggtggaggaggaggtgggctgttgcctttccagatttgcctcaatccc
aggcaggctgaagcgggggccgaggctactgcagccaccagcagagaagctggactcagc
agcacactgctggccgctcccccccagcacccacttcttgtgcaggtcaccccgtctttc
acttccccttcctcttttttccaggctctgtcctctgcttcctctcccccctcatctcct
ctgccccctgcagctccttccttcctattcccagctttcctggagcccccaaggactaga
tccagatctaggtctggattcatcatgaaccaacaacatcagctgcatggcttgcctggg
gtaacccacttccaccatcaccagctccagacaccacctccttaccttatctcaactgcc
ctgcatgggccaggcatggacagaaatgataacaaccccccagagggagcaaggcaaccc
cacagtccaccagtggtggccaggaggagggtaaacagtccgaccaccaatgaacaccac
catcatcattaccaccatcaccacatacgacctccgccaggtcatttgggcccctcgttt
cagtgtcagccagttcatcatgaccacatacgcaacgatgacagcgaaaagaacgaagac
agtcccagtccaaaaagacagagactatcaaattcagtctttgattacgcagcaccgtca
cccgcaccatcaccgccaatgcgaccatgggagatgtcatcaaataggcggcctccttcg
gcccgccccaatcagcaccatttctcaggggaaagatgcaacactcctgcacgcaacagg
aggagccctccagtcaggcgacagagaggacgaagggatagactttctcgtcacaattcc
attagccaagatgaaaattatcatcacctttcctatggtcagcagccagcagtagaagaa
cccagggcttttcacccaccgaatgtatccccacgtatgctccatcctgcggcacatgca
caacagcagaatgcggtaatggttgacattcatgagcagattcaccagggcgcagtgcca
gtttcgtacactgtcacgactgtagcaccacatggaattcccctttgtactggacagcac
atccctgcctgcagtgcacaacaggttccaggctgttctgtggtcttcagtgggcagcac
ttaccagtctgcagcgtgcctcctccaatgcttcaagcttgctcggttcaacatttacca
gttccctatgctgctttccctcccctcctttccagcgatccattcctgttacatccacct
cacctttccccgcatcaccatgcacatcttccccctcctggccaatttgtgcccttccag
acacaacagtctcgatcgcctctgcagagaatagagaatgaagtggaactgttgggtgag
catctacctgtaggaggatttacgtatcctccacctgctcacgcgcccaccttacaaccc
tctgcaccgttacagttcatcactcacgatcctttgcaccaggaggtttcttttggagtt
ccctatcctccatttatgcctcgaagactaactggtcgtagcagataccgatcacaacaa
ccaataccaccaccaccttaccatccaagccttttaccttatgttctatcaatgcttcca
gtgcctcctactgtgggaccagcctttagcttcgaattggatgtagaagatggagaggtg
gaaaactatgaggttggtgcattgctaaatcttgctgaaaggttgggtgaggctaaacca
cgaggattaacaaaagcagatatagaacagcttccgtcgtatagatttaacccaaacaac
caccagtcagagcagaccttgtgtgtagtatgcatgtgtgatttcgagtcaaggcaactt
ctaagagtcctaccgtgcaaccatgaattccatgccaagtgtgttgacaagtggcttaag
gcaaaccgtacctgccctatatgtcgagctgatgcttcagaagttcatcgtgattccgaa
tga
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