Bufo bufo (common toad): 120990005
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Entry
120990005 CDS
T07950
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120990005 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120990005 (SMARCA5)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120990005 (SMARCA5)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120990005 (SMARCA5)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120990005 (SMARCA5)
RSF complex
120990005 (SMARCA5)
WICH complex
120990005 (SMARCA5)
B-WICH complex
120990005 (SMARCA5)
NORC complex
120990005 (SMARCA5)
BRF complex
120990005 (SMARCA5)
NuRF complex (fruit fly)
120990005 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
RRG8
AAA_14
Motif
Other DBs
NCBI-GeneID:
120990005
NCBI-ProteinID:
XP_040274435
LinkDB
All DBs
Position
2:641654808..641692821
Genome browser
AA seq
1048 aa
AA seq
DB search
MSEESTEQRKEPATEVKEEEEKMTVEEATEADGNQPQPGKDEAAAEEEAVEDPGKDENDS
PNKSKESNEMDPGYEEKRKEDRTNRFDYLLKQTELFAHFIQPAAQKTPTSPLKMRPGRPR
LKTDEKQNLISAGDNRHRRTEQEEDEELLTESSKTTNICTRFEQSPSYVKGGTLRDYQVR
GLNWLVSLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMA
EFKRWVPSLRAICLIGDKDQRVTFIRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLV
IDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFD
SWFDTNNCLGDQKLVERLHLVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTK
ILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDVHLATNSGKMV
VLHKLLPKLKEQGSRVLVFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDDRQESILAFN
DPESTKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR
FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKD
SEITDEDIDAILERGERKTAELKEKLSNMGESSLRNFTVDTESSVYNFEGEDYREKQKMA
FTEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPSVQDFQFFPPRLFELLE
KEILYYRKTIGYKVPRNPELPNAAQVQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWN
KRDFNQFIKANEKWGRDDIENIAREVEGKTPDDVMEYSAVFWERCNELQDIEKIMAQIER
GEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDK
ENVYDELRQCIRNCPQFRFDWFLKSRTAMELQRRCNTLITLIERENLELEEKEKAEKKKR
GPKSSSAQKRKMDGAPDGRGGRRKKLKL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggaaagtaccgagcagcggaaagagccggccactgaagtgaaggaagaagaa
gagaagatgacggtggaagaggcgacggaggctgacgggaaccaaccgcagccggggaaa
gatgaagccgcggcggaggaggaagcggtggaggaccctggaaaagatgagaacgactcc
cctaataaatcaaaagagagcaatgagatggatcctggttatgaagagaaaaggaaagaa
gaccgcaccaatagatttgattaccttctgaagcaaaccgagttgtttgctcacttcatt
caaccagcagcacagaagacacccacatctccattaaaaatgaggcctggtcgtcctagg
ttgaagacagacgagaagcagaatctgatatctgcaggagataaccgccatcggagaaca
gagcaggaagaggatgaagaacttttaactgaaagctccaagactactaatatttgcacc
agatttgaacagtctccgtcatatgttaaaggtggtacgttaagagattaccaggtcaga
ggcttgaactggcttgtatccttgtacgagaatggcattaatggcatactggctgatgaa
atgggtctcggcaagactctgcagacaattagtcttcttgggtatatgaaacactacagg
agcattcctggaccacatatggtgttggttcctaagtctaccttgcacaattggatggct
gaattcaaaagatgggtgccctccctccgtgcaatctgccttattggtgacaaggatcaa
agagtgacctttattcgtgatgttcttttgcccggggaatgggatgtttgtgtgacatca
tatgaaatgcttattaaggagaagtctgtgttcaagaagtttaactggcgatacttggtt
attgatgaagcacacagaatcaagaatgaaaaatctaagctgtcggaaatcgtgagagaa
tttaagacgacaaatcgtctcctcttaacagggacccctcttcagaataacttgcatgaa
ctttgggcacttctgaattttctgctgccagatgtgtttaactcttcagaggattttgac
tcctggtttgataccaacaactgtcttggggatcaaaaactggtggagcgtcttcatttg
gtgttgaggccgttcctcctgcgacgtataaaagctgatgtggaaaagagtctcccccca
aagaaggaagtcaaaatctatgtcggtctaagtaagatgcagagagaatggtatacaaag
attttaatgaaagacattgacattttgaactcctcagggaagactgataaaatgaggctg
ttgaatatcctgatgcagttgagaaagtgttgcaatcatccgtacctttttgatggtgcg
gagcctggtcctccgtacaccacagatgtgcacttagctactaatagcggtaaaatggtt
gtgctgcacaagctgctccccaagctaaaagagcaaggttctcgtgtgctggtattcagc
cagatgacaagagtcttggatatcttggaagattattgcatgtggcgaaattatgaatat
tgccgtctggatggacaaacgccgcacgatgatagacaagaatccatcttggcttttaat
gatccggagagcacaaaatttctatttatgttgagcacacgtgctggtggacttggtatt
aacctcgctacagctgatgttgtcataatatatgattctgactggaacccccaagtagat
cttcaggccatggaccgagcacacagaattgggcagacgaaaactgtgcgagtgtttaga
ttcattacagacaacacagtagaagagcgtattgtggagagagcggagatgaaactacgc
ctggattccatagttattcaacaaggaaggttggtggaccagaacttgaataagctaggg
aaggatgaaatgctgcagatgattcgacatggagccacacacgtgtttgcctcaaaggac
agtgaaatcactgatgaagatatagatgccatcttggaaaggggagaaaggaagacggca
gaactcaaagagaaactttcaaacatgggtgaaagttcactgagaaacttcactgtggat
acggagtccagtgtgtataactttgaaggtgaagattacagagaaaagcaaaagatggca
tttactgagtggattgagccaccaaaacgtgaaagaaaggcaaactatgctgtggatgcc
tattttagagaagcacttcgtgtcagtgagcccaaaataccaaaagctccacgtccccca
aagcagcccagtgttcaggacttccagttcttccctccacgattgtttgagttgctggaa
aaagaaattctatattatagaaaaaccattggatataaggtgcctcgcaatccagaattg
cctaatgcagcccaggtgcaaaaggaggaacagttaaaaattgacgaagcagaaccactt
aatgatgaagagctagaagaaaaggagaagctgctaacacagggcttcaccaattggaac
aagagagatttcaatcagtttattaaagctaatgaaaaatggggaagagatgacattgaa
aacattgcccgtgaagtagaaggcaagactcctgatgatgtaatggagtattcagctgtg
ttttgggaaagatgtaatgagctccaagacatagagaagatcatggcccaaatagaaagg
ggagaagcaaggatacagaggagaataagcataaagaaagcattggacacaaagattggt
cgatacaaggcgccctttcatcagttgaggatatcttatggcaccaacaagggcaaaaat
tacacagaggaagaagatcgttttcttatctgcatgctgcacaaacttggttttgataaa
gaaaatgtgtatgatgaactcaggcagtgcattaggaactgtcctcagttcagatttgac
tggttcctgaaatcaaggactgcaatggaactacaaagaagatgcaatactctgatcact
ttaattgaaagggaaaaccttgaattggaggagaaggaaaaagctgagaaaaagaaacgt
ggtccaaagagttcttcagctcagaaacgaaaaatggatggtgctccagatggcagaggg
gggagaagaaagaagcttaagctttga
DBGET
integrated database retrieval system
