Bufo bufo (common toad): 120990212
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Entry
120990212 CDS
T07950
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120990212 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120990212 (FIP1L1)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120990212 (FIP1L1)
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GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
120990212
NCBI-ProteinID:
XP_040274798
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Position
2:complement(727051003..727129535)
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AA seq
621 aa
AA seq
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MSAGGELVERMVVTSEISGSNAAAAPSSTASPTAASTATATTVTAGEGGGDEEEEWLYGE
ENEAAGPEVDDEEDMSSSHPLPVVEVETTENGVAKGDRSSISDWPGSISPHLYRPAHVTE
TEDDSDSDSDDDDDDVHVTIGDIKTGAPQYGSYGTTPVNLNIKTGGRLYGSSGGKVKGVD
LDAPGSINGVPLVEVDLDSFEDKPWRKPGADLSDYFNYGFNEDSWKAYCEKQKRLRMGLE
ALPVSSSTNKITVQQGRTGNSEKDGVLQTTKPEFTSPSSLFKSGAPPPSRKLSGTIDVIG
QTTTITRVEGRRRGANESNIQVVTEQSPSEVDNFIKPPPPFFPPGAPPPHLPPPPLFPPP
PNVSSAPPLIPPPGSGLHLSFSMQKPSRYGIPITVPPPGFPPPHGGPPPSLIPTIESGHS
SGYDGRSTPAFPYGSVSFPHMPGSAGPWSSLVETSKPWDYYPRREKDRDRERDRERDRER
DRDRERERDRERERPRERDRERERERDHSPSVGAYNSEEERYRYKDYERTERTERTERSY
DRHRERISREKEERHRERRHREKEESSRHKSSRSSSRRRHDSEEGDSHRRHKHKKSKRSK
EGKDTGSEPAPEPESVEASAD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggtggagagctggtggagcggatggtggttacgtcggagattagcggctcc
aacgcggccgctgctccttcctcaaccgcctccccaacagcagcgagcacagccaccgct
actacagtgactgcgggcgaaggaggcggggatgaggaggaagagtggctgtatggggag
gaaaatgaagctgctgggccggaggttgacgatgaagaggacatgtcaagctcgcatccg
ctacctgttgttgaagtggagactactgagaatggtgtggccaaaggggataggtcatca
atatcagactggccggggtccatctccccgcacctctaccgaccggctcatgtgactgaa
acagaagatgacagtgatagcgatagtgatgatgacgacgatgacgtccatgtaactata
ggagatattaaaacaggagctcctcagtatgggagctatgggacaaccccagttaacctg
aatattaaaactggaggcagactctatggatcttctggaggaaaagtgaagggagtggat
ttggatgcccctggcagtattaatggagttcctctggtggaggtggacttggattctttt
gaggacaaaccttggagaaagccaggcgctgatctctctgactacttcaattatggattc
aacgaagattcctggaaagcttactgtgaaaaacagaagagacttcgaatgggtctggaa
gcacttccagtctcatcgtcaacgaataaaattacggtacagcagggaagaactggaaat
tcggagaaagacggtgtcttacagacgacaaaaccagagttcacgtctccatcatcttta
tttaaatctggggcaccacctccaagtaggaagctctcgggcacaattgacgtcattgga
caaaccaccacaataactcgcgtggagggccgccgacgaggcgctaatgaaagcaatatt
caggtagtcacagaacagtctccttcagaggtggataattttatcaagccgccaccacct
tttttccctcctggcgcacccccaccacacctcccaccacctccattatttccaccacct
ccaaatgtcagctctgcccctcctcttatacctccaccaggatctggattgcacttatct
ttctccatgcaaaaaccatctagatatggaatacccataacagtgccaccaccaggtttc
cctcctccacatggcgggccgccaccttctcttattccgacaatagaaagtggacattct
tctggatatgacggacgctccacaccggcttttccctatggaagtgtttcctttccacac
atgccagggtctgcaggcccatggtccagtcttgtagagacttccaagccatgggactac
tatcctcgaagggagaaggacagagatcgggaaagggaccgggagagagatagagaaagg
gaccgggacagagaacgggaaagggacagagaacgtgaacgtccaagagagagagatcga
gaacgagagagagagcgtgatcacagtcccagtgttggagcttacaacagtgaagaagaa
aggtacaggtacaaagactacgagaggacagagaggacagagcggacagagcggagctac
gatcggcacagggagagaattagcagagagaaggaggagcgacatagagaaaggaggcat
cgagagaaggaagagtcctcacggcataaatcatcgagaagcagcagcaggcgccgccat
gacagtgaagaaggtgacagtcatagaagacacaaacacaaaaaatccaagcggagcaaa
gaaggcaaagacacaggaagtgaacctgccccagagccagagagcgttgaggcgtctgct
gactaa
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