Bufo bufo (common toad): 120990267
Help
Entry
120990267 CDS
T07950
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03030
DNA replication
bbuf03410
Base excision repair
bbuf03420
Nucleotide excision repair
bbuf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120990267 (RFC1)
03410 Base excision repair
120990267 (RFC1)
03420 Nucleotide excision repair
120990267 (RFC1)
03430 Mismatch repair
120990267 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
120990267 (RFC1)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120990267 (RFC1)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120990267 (RFC1)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120990267 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
AAA_14
RuvB_N
AAA_5
AAA_18
AAA_33
TIP49
nSTAND3
AAA_17
AAA_30
AAA_16
AAA_7
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
120990267
NCBI-ProteinID:
XP_040274903
LinkDB
All DBs
Position
2:740435996..740534652
Genome browser
AA seq
1123 aa
AA seq
DB search
MDIRRFFNVAPVAKKSVNEKDKKENLKSSRGVASQKKSKDSKLKSPVSDEELKKKQQQSN
KKKRIIYDSDSEEDTPPLKKSKKPREVSPPISKPLKIKKPDPVDYVSDTDEEDFAVLKKP
KKPKENGTAAVSPPSKSPVTSNKTRVPAKVKTPEKRVCTSAIDFFGMGSVKRSHKKLVET
KKEEPRRSTDDSMMDDEAIARELQLAEDEAFEKQLHEDEEFAKTLAMIDDTPRDKAHRNG
EKKQTSPALKKSPKSEKPSARTMSQSDASTTVKKEKDIKEETKKASRAQSESSSSAKEKS
SPVKSSSKLALMKKKDEAPEKEVAISSPITKTKVISPKKEEVTPVKTSQKSESSPEDSEK
KRGNYTAYRNFLNREGPKALGSKEIPQGADNCLEGLTFVITGVLESIERDEAKSLVERYG
GKVTGNVSKKTNYLIMGRDGGESKREKAESFGTKIIDEDGLFDLIHSLPGKKSKYVIAAE
AEMKTKVKAEKTPKKVTKKPSPVKRTLTPEKRQSPRAKKLAVEKTNDDRKMSIKQEEKPC
SVKSLNLPPVSDKTESLLWVDKYKPTSVKAIIGQQGDQSCANKLIRWLKDWHKNHSTEDK
KPAVKYSKFGGKDDGSSFKAALLSGPPGVGKTTTAVLVCEELGYSYVELNASDTRSKNSM
KQVVAESLNNTSIEGFYLGTSKFVNSKHVLLMDEVDGMAGNEDRGGVQELIALVKGSKIP
IICMCNDRNHPKIRSLSNYCFDLRFQRPRLEQIKGAMMSVAFKEGLKIPPPAMNEVILGA
NQDIRQVLHNLSMWCASSKALSYDDAKSSANNAKKDIKMGPFDVVRKVFSSGEETARMTL
IDKSDLFFHDYSMGPLFVQENYIHVKPAAAGGNVKKHLMLLSKTADSICDGDIVDRAIRS
KQVWSLLPTQAIYASVIPGELMRGYMSQFPSFPSWLGKYSSTGKHGRITQDLSMHTSLRT
RTSKCALNLDYLPYLRDKLVHPLTAHGTDGVQEVVDLMDTYYLMKEDYDNLMEICSWGGK
PTPFSKLDPKVKAAFTRGYNKEAHLAPYSLQIVKASKKDASSTMQSEYGEEGNIEDTQAE
ENQDDDVTVDAMIKAKKAKPSKSAKTEKGGDKKPGKAKSKKAK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaggtttttcaatgtcgccccagttgccaagaaatctgtgaatgagaag
gataaaaaagagaatctcaaaagctctcgtggagtcgcttcacagaagaaatctaaagac
agtaagttgaaaagtcctgtcagtgatgaggagttgaagaagaagcagcagcagagtaac
aagaaaaagaggataatttatgattcagactcagaagaagacacaccaccattaaaaaaa
tcaaaaaagccgcgggaagtatcacccccgatttcaaagccgctaaagattaaaaaacct
gatcctgttgactacgtttctgacacagatgaggaagactttgctgttttgaaaaagccc
aagaaacctaaagaaaatggaactgctgctgtttctcctccttcaaagtctcctgtcact
agtaacaaaacccgtgtaccagccaaagttaaaacgccagaaaaacgggtgtgtacatcg
gcgatagatttctttggaatggggagcgtcaagcgttctcacaagaagcttgtggaaacc
aagaaagaggaacctcgtagaagcacagatgactctatgatggatgatgaagctattgct
agagagctgcaacttgctgaggatgaagcatttgaaaaacagctccacgaagatgaagaa
tttgcgaaaacactggccatgatagacgatacacctagagataaggcacatagaaatggc
gaaaagaagcagacctctccagctttgaaaaaaagcccaaagtctgagaaaccttcagct
aggacaatgagccagtcagatgcatcaacaacagttaagaaagaaaaggatataaaagag
gagaccaaaaaggcttcacgtgcacagtctgaaagttcatcttcagccaaagaaaagtct
tctccggtcaagagcagctccaagctagctctaatgaaaaagaaggatgaagctccggaa
aaggaggtggcgatatcgagcccgattactaaaaccaaggttatatctccaaagaaagaa
gaggtgacacctgtgaaaacatctcagaaatcggagtccagtcctgaagactctgagaag
aagcgtgggaattatactgcatataggaatttcctgaatcgagaaggcccaaaagctctt
ggttccaaggagattccccagggggcagataactgcttggagggtctgacgtttgtcata
actggggtcctggagtccatagagcgagatgaggccaagtcattggtagagcgctatggg
ggcaaagtaactggaaatgtcagcaagaagaccaactacctcatcatgggccgtgatggt
ggggagtccaaacgtgagaaggcagaaagttttggaacaaaaatcattgacgaggatggc
ttgtttgatttaattcactctttacctggaaagaaatccaagtacgttatagcagcagaa
gctgagatgaaaaccaaagttaaagccgaaaagaccccaaagaaggtaaccaaaaagcct
agcccagtaaagaggacattaactcctgagaagagacagtcaccaagagcaaagaaacta
gcggttgagaagacaaatgacgacaggaagatgagcataaagcaggaggagaaaccttgt
tctgttaaatcactgaacttaccgccagtcagtgataagacagagagcttactctgggtt
gataaatacaagccaacttctgtgaaggcaatcatcggtcagcagggagatcagagctgt
gccaacaaactcatccggtggctgaaggactggcacaagaatcactccactgaagacaag
aagcctgcagtaaaatatagcaaatttgggggcaaggacgatgggtcatcctttaaagca
gccctgctgtctggaccgcctggtgttggaaaaaccactacagctgttttggtgtgcgag
gaacttggctacagctatgtggagctgaatgctagtgacacacgcagcaaaaacagcatg
aagcaggtggtagcggagtccttgaacaacaccagcattgaagggttttacttggggacc
agcaaatttgtaaattctaaacatgtcctgctcatggatgaagtggatgggatggcagga
aatgaagaccgaggaggagtacaggagctaattgctctggttaaaggttccaagattccc
atcatctgcatgtgcaatgaccgcaatcatcctaaaatccgatcgctgtcaaactactgt
tttgacctccgcttccagaggccaagactggaacagattaaaggtgccatgatgtctgtg
gcatttaaggaaggcttaaagattcccccaccggctatgaacgaagtcattcttggggca
aaccaagatattcgtcaggtactgcataatctcagtatgtggtgcgctagcagcaaagcc
ttgagctatgacgatgctaagagtagtgccaacaatgccaaaaaggacattaaaatgggt
ccgtttgacgttgtgcgcaaggtgttttctagtggagaagaaactgctcgcatgactttg
atagacaagtcagacctcttcttccatgactactcgatgggacctctgtttgtccaagaa
aattatattcatgtcaaacctgccgctgcaggaggaaacgtgaagaaacacttaatgctc
ttgagcaagacagccgacagtatttgtgatggcgatattgtagacagggctattcgtagt
aagcaggtctggagcctcttacctacacaggcgatttatgccagcgtcattccgggggag
ctgatgagggggtatatgtctcagtttccaagctttcctagttggctgggaaaatactca
tctacagggaaacatggccgcatcacccaggatctctccatgcatacgtctcttagaacg
aggacaagtaagtgcgcactgaacttggattacttgccgtatttgagggacaagctggtg
catccattgactgcgcatggcactgacggtgtgcaggaagtggtggatctcatggacacg
tactacctgatgaaggaagattatgataacctaatggagatctgcagctggggaggaaaa
ccaacccccttttctaaacttgatcccaaggtgaaagcggccttcacacgtggctacaac
aaggaagcccatctcgcaccttactctctgcaaatagtcaaagcctccaaaaaagatgct
tcttccacaatgcagtccgaatatggtgaagaggggaacatcgaagacacacaggccgaa
gagaatcaggatgacgatgtcaccgtagacgcgatgataaaggccaaaaaagcaaaacct
tcaaagtctgccaagactgaaaaaggtggagacaaaaagccaggtaaagcaaaaagtaag
aaagccaagtga
DBGET
integrated database retrieval system
