Bufo bufo (common toad): 120990303
Help
Entry
120990303 CDS
T07950
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120990303 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120990303 (DHX15)
03009 Ribosome biogenesis [BR:
bbuf03009
]
120990303 (DHX15)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120990303 (DHX15)
Spliceosome [BR:
bbuf03041
]
Complex A
U2 snRNP components
U2 related factors
120990303 (DHX15)
Complex B
120990303 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120990303 (DHX15)
Ribosome biogenesis [BR:
bbuf03009
]
Eukaryotic type
90S particles
Helicases
120990303 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
ResIII
Flavi_DEAD
AAA_25
AAA_29
DUF3915
Motif
Other DBs
NCBI-GeneID:
120990303
NCBI-ProteinID:
XP_040274960
LinkDB
All DBs
Position
2:757777098..757842468
Genome browser
AA seq
760 aa
AA seq
DB search
MSKRHRLDLGEDYATSKKRGEGKDRDRDRDDRSKDRDRDRDRDRERDRDKDKESRATSNT
PFISAGGVQAVKPAALPQGVNPYTNLPHTPRYYEILKKRLLLPVWEYKERFTDILIRNQS
FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQ
EVGYSIRFEDCSSAKTTLKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGV
LKEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQ
QQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMV
IASCDFNCSNEILSITAMLSVPQCFIRPTEVKKAADESKMRFAHIDGDHLTLLNVYHAFK
QNHESSQWSYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVT
GYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKP
EWLVKIAAQYYDMSNFPQCEAKRQLERLIAKFQTKEYSQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgactggacctgggcgaggattatgccacgagtaagaagagagga
gaagggaaggaccgggatcgtgatagagatgaccgctcaaaggaccgagatcgtgacaga
gaccgtgatcgcgagcgggatagagacaaagataaagaatctcgtgctacgtcgaacact
ccatttatctcagctggtggagtacaggccgtgaagccggcagcacttccccagggcgtc
aatccatataccaacttaccccacacaccacggtactatgaaatcctgaagaagcgtctg
ctgttgcctgtctgggagtacaaggaacgttttacagatatcctcataaggaaccagtct
tttgtcttggtgggagagacgggttctggaaaaactacacagatccctcagtggtgtgta
gaatacatgaggtcgttacctggtccaaagagagccgttgcctgtacccagcccagaaga
gtggctgccatgagcgtggctcagagagttgccgatgaaatggatgttatgcttggccaa
gaggttggctactctattcgatttgaagactgcagcagtgcgaaaacaactctgaagtac
atgactgatggtatgttactccgagaggcaatgaacgaccccttgttggagcgctatggt
gtagtcatacttgacgaagcccatgaaagaactttagctacagatattttaatgggcgtt
ttaaaagaggttgttcgacaaaggaatgatttaaaggttatagtcatgagcgccactctt
gatgcaggaaagtttcaagtttacttcgatagctgtcctctcctcactattcctggtcgc
acacatcctgtagaaatcttttacactccggagcccgagagagactatctagaagcagcc
attcgtacagtcattcagattcatatgtgtgaagaggaggagggagatcttctgctcttc
cttaccggccaagaggaaattgatgaagcgtgcaaaaggataaaaagagaaattgatgac
ttgggccctgaagttggagatataaagatcatccctctatattctacccttccaccccag
caacagcagagaatatttgaaccccctccacccaagaaacccagtggtgcaataggaagg
aaagttgtggtatccactaacatcgctgagacctcattaaccattgatggtgttgtattt
gtgatcgatcctggatttgctaagcaaaaggtgtacaaccctcgaattcgggtagagtct
cttctggttactgctatcagcaaggcttccgcacagcaaagagcaggtcgtgctggtcgt
accaggcccggcaaatgcttcagactttacacagagaaggcgtataaaacagaaatgcag
gacaacacatacccggagattttgagatccaacttgggctcagtggtgctgcagctgaaa
aagcttggtattgatgacttggtacactttgacttcatggatccaccagcccctgaaaca
ctgatgcgagctttggagttgctaaattaccttgctgccttaaatgatgatggtgatctg
actgaactgggatccatgatggcagagtttcccctcgacccccagcttgccaagatggtc
attgccagttgtgacttcaattgttctaatgagatcctatccataacggctatgttgtca
gtcccacagtgttttattcgacccacggaagtcaagaaagctgcagatgaatccaagatg
aggtttgcccacatagatggcgatcatctgacgctgctgaacgtctaccacgctttcaaa
cagaaccacgagtcgtctcagtggagttatgacaacttcattaactacaggtccctgatg
tctgcagacaatgtacggcagcagctgtcacgaatcatggacaggtttaacttgccacgt
agaagcacagacttcaccagccgggattattacattaatatcagaaaagccctggttacc
ggctattttatgcaggtggcacatttggaaagaaccggccattacctgaccgtgaaagac
aaccaggttgtgcagttgcatccttctacggttctggaccacaagccagagtgggtcctt
tataatgaatttgtccttacaacaaagaattacatccgcacatgcacagacataaagccg
gaatggttggtgaaaattgctgcccagtactacgacatgagcaacttcccacagtgtgaa
gccaagaggcagctggaaagactcattgccaaatttcagacaaaggagtactcccagtac
tga
DBGET
integrated database retrieval system
