Bufo bufo (common toad): 120990311
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Entry
120990311 CDS
T07950
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120990311 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbuf00536
]
120990311 (SLIT2)
Glycosaminoglycan binding proteins [BR:
bbuf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120990311 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRR_1
LRR_9
EGF_TEN
LRRCT
LRR_14
hEGF
EGF_DL_JAG
JAG1-like_EGF2
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120990311
NCBI-ProteinID:
XP_040274969
LinkDB
All DBs
Position
2:complement(762996978..763426518)
Genome browser
AA seq
1530 aa
AA seq
DB search
MFSEFMKKKMCGFGFWKLSISVGLVLVILSEVAPQPCPAQCTCSGTTVDCHGLALRSVPR
NIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELDRLRLN
RNSLQVLPELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDFNQISCIEDGSF
RALRDLEVLTLNNNNITRLSVASFNHMPKLRIFRLHSNNLYCDCNLAWLSDWLRQRSRVG
LYTQCMGPTHLRGHNVAEVQKREFICNGQQSFMVSSCSVLHCPAACTCSNNVVDCRGKGL
TEIPTNLPETITEMRLEQNAIKVIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITELPQRVFEGLFSLQLLLLNANKINCLRVGAFQDLHNLNLLSLYDNKLQTI
AKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQI
KSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELR
LNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGANGVNELILTSNRIENVHR
KMFKGLDGVKSLMLRSNHITCVNNDSFTGLSSVRLLSLYDNQIVTVAPGAFDTLHSLSTL
NLLGNPFNCNCHLAWFGNWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDEGNDEN
TCSPLARCPAECACLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHL
MLIDLSNNRIGTVSNQSFSNMTQLLTLILSYNRLRCIPLRAFDGLNSLRLLSLHGNDLST
IPQGAFGDLSSLSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCTGPGDMADKLLLT
TPSKKFTCHGPVDVKVLAKCNPCLSNPCKNEGTCKNDPVDFYRCTCPYGFKGQDCDIPIH
ACFNSPCKNGGTCHLKEGEKDGFWCTCPDGFEGENCEVNIDDCEDNDCENNSTCVDGINN
YTCLCPPEYTGELCEEKLDFCSPEVNPCQHDSKCIVTPRGYKCDCTPGYVGDNCDTDYDD
CQDNKCRNGARCTDAINGYTCVCPDGYSGLFCEFPPPMVLPRTSPCDNYECQNEGQCIMK
GNDPSCQCTSSYQGSKCEKLTSINFVSKEVFLQIPSTRIRSQTNISLQVATDEDSGILLY
KGDKDHVAVEVYRGRVRVSYDTGNYPASAIYSVETINDGNFHIVELVSLDQTLSLIVDGG
NPKTITNLSKQSSLGFESPLYVGGMPIKNNVAVLRQSSGHNGTYFQGCIRNLYLNNELQD
FKMLNLQTGIVPGCEPCNKKVCIHGTCVASSQSGFTCECEGGWSGPFCDQQSNDPCLGHK
CVHGTCLPINAFSYSCKCSSGYGGVLCDEAEEPINPCQSLKCKHGKCRVSGLDKAYCECN
TGYTGDSCDKEISCRGERIRDYYQKQQGYAACQTTEKVSRLECRGGCTNGQCCRPLRSKR
RKYIFECTDGTSFVDEIEKVIKCGCTKCPS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggaatttatgaagaagaaaatgtgtggctttggtttctggaagctgtccatc
tcggtggggttagtgttggtgatcctgagtgaagtggcacctcagccatgtccggctcag
tgcacttgttctggaaccacggtggactgtcatgggcttgctctgcgcagcgtaccacgc
aacattcccaggaatactgaacgactagatctaaatggaaataatatcacaagaataacg
aagacagattttgcgggtttgagacatctacgcgtcttgcagcttatggagaacaagatt
agtactattgaaaggggagcatttcaagatctaaaagagctggatagactacgcttaaat
cgaaatagtcttcaggtattaccagaattgctttttctgggaactccaaaactctacaga
cttgacctcagtgagaaccagatccaagcaatccccagaaaagcatttcgtggtgcggta
gatattaaaaatctacaactggattttaaccagatcagctgcatcgaagatggatccttc
agagccctgcgcgacctggaagtgctcaccctcaacaataacaacatcactcgactttca
gtggcgagcttcaaccacatgccaaaacttcgaatttttcgacttcattccaataaccta
tattgtgattgtaacctggcctggttatctgactggttacgacagagatcccgcgttggc
ttgtacacacagtgcatggggcccactcacctgagaggacacaatgttgctgaagttcag
aagcgagaattcatatgcaatggtcagcagtcgttcatggtgtcctcctgtagtgtcctg
cactgtccagctgcttgtacctgcagtaataatgttgtggactgtcgaggaaaaggctta
actgagattccgaccaacctccctgagactataacagaaatgagactagaacaaaatgca
atcaaggtcatacctccgggggctttctcaccatataaaaagctgaggagaattgattta
agcaacaaccagatatcggaaatagctccagatgccttccaaggcctccgctcactcaac
tctctggttctttacggaaataaaatcacagaactcccccaacgtgtttttgaaggatta
ttttcattgcagttactattgctcaatgccaacaagataaattgtctgagagtaggtgct
ttccaggacctacacaacctgaatctcctctctttgtatgacaacaaacttcaaaccatt
gccaagggcacatttgcaccactgcgtgccattcagacattgcatttggctcagaaccca
tttatctgtgactgccatctgaagtggctggcggattatctgcacacaaaccctattgag
accagtggtgcccgctgcaccagcccccgtcgactggcaaacaaaaggattgggcagatc
aaaagcaagaaattccgctgctcaggtacagaggactataggtccaagctgagcggggac
tgctttgctgacctggcgtgtccagagaagtgtcgctgtgaaggcaccacggtggactgt
tcaaaccagaagctcactaagatcccagaccacatcccccagtacactgctgagttgcgt
ctcaacaacaatgaatttacagtgttagaagcaactggtatattcaagaaactcccccag
ttgcgaaaaataaatctgagcaacaacaagatcacggatattgaggaaggagcctttgat
ggggcaaatggagtgaatgaactcatcctgaccagtaaccgaatagagaatgtacaccgt
aaaatgttcaaaggcctggatggggtcaaatcattgatgctgagaagtaatcacattacc
tgtgtgaataatgacagctttaccggtctgagttctgtgcgcttactctctctctatgac
aatcagattgtcacagtggccccgggagcatttgatacgctgcattctctgtctacattg
aaccttctgggcaatcctttcaattgtaactgccacctggcctggtttggaaattggctg
agaaagaaacgtattgtgactggaaaccctcgatgccaaaaaccttacttcctcaaggag
attccaatccaagatgtcgccattcaggactttacttgtgatgaagggaatgatgaaaac
acttgctcaccacttgctcggtgcccagctgagtgtgcctgtctagacacggtagtccgc
tgcagtaacaaaggtctaaaagcattacccaagggaatacccaaggatgtcacagagctg
tacctggatggaaaccagtttactctggtgccaaaggagctgtccaattacaagcactta
atgctcattgacctgagcaataacagaatcggcactgtctctaaccagagtttcagtaac
atgactcagctcctcactctgattctcagttacaatcgtcttcgatgcattcctctccgg
gcttttgatggtcttaactccctcaggctcttgtcgctccacggcaatgacttatctact
attcctcaaggggcttttggtgatctgtcatctctgtcacacttggcaattggggcaaac
cctctgtactgtgactgtaacatgcaatggttgtcagactgggtcaagtcagaatacaag
gagcctggtattgcacggtgcactggacctggagacatggctgacaaacttctccttact
acaccatccaagaagttcacgtgtcatggacctgtggatgtcaaagtccttgccaagtgt
aatccatgtttatccaacccatgcaaaaatgagggtacctgcaaaaacgaccccgttgac
ttctaccggtgcacatgtccctatggtttcaagggtcaggactgtgatatacctatccat
gcttgcttcaacagtccctgtaaaaatggtggaacatgtcacttgaaagaaggggagaag
gatggcttttggtgtacatgtccagatgggtttgaaggtgagaactgtgaggtgaacatt
gatgactgtgaagataatgactgcgaaaataattccacttgcgtggatggaatcaacaac
tacacctgtctttgtccaccagaatacacaggtgaactctgtgaagaaaagctagacttc
tgttccccggaagtaaacccgtgtcagcatgattctaaatgcatagtgacgccgagagga
tacaaatgtgactgcaccccgggatatgtgggggataactgcgacacagattatgatgat
tgccaggacaacaagtgtcgcaatggggcacggtgcacagatgcaataaatgggtacacg
tgtgtgtgtccagatggctacagtggtctgttctgtgaattcccacctcctatggttcta
ccacgtacaagtccatgtgacaactatgagtgtcagaatgaaggtcagtgcattatgaag
ggcaatgatccgtcctgtcaatgcacctccagctaccaaggaagcaagtgtgaaaaactc
acaagcatcaactttgtgagcaaagaagtatttctacaaatcccatccacaagaatccgc
tctcagacgaacatctcactacaggtggccacagatgaggacagtgggatcctcctctac
aaaggtgacaaggatcatgtagcagtggaagtttaccggggcagagtgcgggttagttat
gacactggaaattacccggcatctgctatctacagcgttgagacaataaatgacgggaat
tttcacattgtggagcttgtaagcctggatcaaacattgtcactaatagtggatggcgga
aaccccaagaccattactaatttgtcaaaacaatcttctctgggtttcgagtccccgctt
tacgtaggaggtatgccaataaagaacaatgtcgctgtgctacgtcaatcttctggacac
aatggcacttatttccaaggctgcatacggaacttgtacttaaataacgagctgcaagac
ttcaagatgctcaatctgcaaacaggaatagtccccggatgtgagccctgcaacaagaaa
gtctgcatacatggaacatgtgtagctagcagtcagtccggcttcacctgcgagtgtgag
ggaggctggtcaggaccattctgcgaccagcagtccaacgacccttgcctaggacacaag
tgtgtccatggaacctgtctgccaatcaatgcattttcctatagctgtaaatgttcctcc
ggctatgggggagtcctgtgtgacgaagctgaagaaccgattaacccttgccagtctctt
aagtgtaaacatgggaagtgtagggtttcaggtctggacaaagcctattgtgagtgcaac
actggttacaccggagacagctgtgataaagaaatctcttgccgaggggaacggatcaga
gattattaccaaaagcagcaaggttacgctgcttgccagacgaccgagaaggtatcgcga
ctagaatgcagaggaggatgcacaaatggtcagtgctgcagaccactgagaagtaagcga
cggaaatacattttcgagtgcactgatggcacctcatttgtggacgaaattgagaaagtc
ataaaatgtggctgtacaaagtgcccctcctaa
DBGET
integrated database retrieval system
