Bufo bufo (common toad): 120990833
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Entry
120990833 CDS
T07950
Symbol
RPGRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bbuf03037
]
120990833 (RPGRIP1)
Cilium and associated proteins [BR:
bbuf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120990833 (RPGRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
120990833
NCBI-ProteinID:
XP_040275669
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Position
2:300307163..300387297
Genome browser
AA seq
1484 aa
AA seq
DB search
MTFVDYINNIRPELKFTLHQDSERVSFLDTWVIRGTDNKITTDLYVKKTDRNSLLSFQSN
HPSTVKKSLPYSQYKRVANIVMDQDTRDLRLREMTQKFIDRGYPPCLLHQQLDKIRNPTE
RKDKGQRIPLVVKYHPWMDRVRAVIYKHWNILQKSYPAIQEFRDRPMMCFKRNKNIRDMI
VRADMSLFDETSSDLPVKDTDCRPAVIAAIQDVAKAARCQSHLSKKTPKLKEKDLKARRR
VFLISREELEDNFLRLHEENLILKDYARKQEDKLKRMATKLLRLTSDLGKQGQKKAPGAR
RDGRDLEAEEMIEDLQERVRDLERRNEALRHRLTTYKHRLQFQNGCRHWPYSTVTARTDS
GVRKATVLPDKYKKGLVVQGPDFGHPHMTGDFYGEALSDEARADIDRLFQIIGRQASSGD
DRSTALLKTMVKPKELGAEMILSLHQMQQVEDQRTTIQENVTNIRLQKELREKSTSLCAL
REQFQQLKESYETELQEKQKSLTLSHKAVLTQLENLSSQLKDERGKVLAMEIDQQNMAHL
QKSLLEFQERVSDLEKEKELLKENYENLLKSSLDTENMNSWKVTEVELKAQIKMLEGHIQ
CHVIDLTQSRELLRQEKEQNEHLKKXVSQLQSQLLEKMQEIHNLQDKVSDLLILTTTKHG
FKEEDMKRQKAQPTKVENIQKATERNVRDQNDLWDDRKEKTGEKSNQRQLDLVSNMGSAD
VQREEKERTDMEEKEKRRKRRMREMEADLAETILELQKTREMLCLQHKINNDYQEELKTV
KLRLECESRENEEKVRHYETRLLQRNSRVQMLEAQLKDIAYGTFPFRLNTEESPSSEVGI
SPSPSLHRGETLFEVHIEEICFNPYGIRMIGDPEPITFCIYSLYDFETHATPVVAGVRPH
YNFTSRYAVTPDPEFLRYLRVGTLTLELYQVKGVDHYELARGRLKLESALQTTDRVHNST
ILTDEAGETIAELSYWLRLHGPLSHVQCLQRQRNKAHGYLSTRRHGNTEKFWKSPLNSGL
QNELIIKIWGCRSLKASYLGHQPSPYIVYRFYHYPDHTTSIIPCSNNPQFGYEAVYPLQM
TIELERYLQQERLCIYVFDDEETQSGVYLGKAEVPLLRLAQGNSIKGDFGLMNPHGMCVG
SVQINLEWKTPYHEPGQSLWESSISDASRINLNSSGPSKSRKAEEELQRDVSANKRGRRD
PYSTDNPERGKKQKEARRSPSTPHHQSDEMDMNVEDILIGPEVKQDGHEEEINESDQQTI
YVNSFKAVRQALPKGNTLNSLDESLITDSDDDDDDIVISPEPLLTYKLSSSRMRVEVASL
TLDPCSHVATDKSVERVFVEFHFPGVPPEETETPLSLRKPINGEEIFYHFSKVIHLAGEN
HVERRHFLDMLLQGSDSAGERVRLTFTVVSDPINEEEDECRDLGYAYLDLRNLLRRDVEP
AEETLQVSNVTDPREIIGTLRVVIEAREAARAVYRERKMKSRVQ
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgtggactacatcaacaatataagaccagagctgaaatttaccctgcaccaa
gactcagaacgtgtctccttcctcgacacatgggtgattaggggcactgacaataagatt
actactgacttatatgtcaagaaaactgacaggaatagtctcttgtcattccagagtaat
cacccatcgactgtaaaaaaatccttgccatactcacaatataaaagagtggccaatatt
gttatggatcaggacacacgtgacctcaggttacgggagatgactcagaaatttatagac
agaggctatccgccctgtctattacatcaacagctagataagataagaaaccccacagaa
aggaaggacaaaggacagagaataccactagtggtaaaataccatccttggatggaccga
gttagggctgtcatctacaaacactggaacatcttacaaaaatcatatcctgcaattcag
gaatttagggaccgtcccatgatgtgctttaagcgaaataaaaacattagagacatgatt
gtgcgggcggacatgtcactttttgatgagacttcttcggaccttcctgtgaaagacact
gactgccgaccagcagtgattgcagccatacaagatgtagcaaaagcagctcgctgccag
agccatttgtctaaaaagacccccaaattgaaagagaaagatctgaaggctagacggaga
gtctttctaatatcccgtgaggagctagaggacaattttttgcgtcttcatgaggaaaat
ctaatactcaaagattatgccaggaagcaagaagacaaactcaagagaatggccactaag
ttgcttcgtttgacttcggaccttgggaaacaaggacaaaagaaggcaccaggtgcacgg
agagatggaagagacttagaggctgaggaaatgattgaggacttgcaagagcgtgtgaga
gacttagagcgtagaaatgaagccctaaggcatcgactaactacttacaagcataggctg
cagtttcaaaatggctgccgacattggccctatagcacagtaacagctcggacagattcc
ggtgttaggaaagccacagtattgccagataaatataagaaaggtctagttgtgcaaggg
ccagattttggacacccacacatgactggtgatttttatggtgaagctctcagtgatgaa
gccagagctgatattgaccgactgttccagatcattgggagacaagccagtagtggggat
gatcggtctacagccttattaaaaaccatggttaagccaaaagaattaggagcagagatg
atactttccctgcatcaaatgcagcaagtggaggatcaacggacaacgattcaggaaaat
gtgacaaatatccgtttgcaaaaggaactcagagaaaagagcacaagtctctgtgccctc
agagaacaattccaacaactcaaagagtcttatgagacagagctacaagagaagcaaaag
tcattgactctcagtcacaaagcagtgttgacccagctagaaaacctcagctcacaactg
aaagacgaaagaggaaaggtgctagctatggagattgatcagcagaacatggcccatctt
cagaagtcacttcttgagtttcaggagcgagtctctgatcttgagaaggagaaagaactt
cttaaagaaaactatgagaaccttctgaaaagttcactggacacagaaaacatgaactcc
tggaaagtgacagaggtcgagttaaaggcacagattaaaatgctggagggacacattcaa
tgtcacgtaattgatcttacacaaagcagggagcttcttcggcaagagaaagagcaaaat
gaacatctaaagaagnttgtttctcaactccagtctcaactccttgagaagatgcaggaa
atccataatctccaagacaaagtatcagatcttttgattttaacaactactaagcatggt
ttcaaggaggaggacatgaaaagacaaaaagcccagccaaccaaagttgaaaacattcaa
aaggcaacagaaagaaatgtcagagatcaaaatgatctatgggatgaccgaaaagaaaag
acaggagagaaaagtaaccagagacaattagatttggtatcaaatatgggaagtgcagat
gtccaaagagaggagaaagagaggacagatatggaggagaaggagaaaaggaggaaaagg
agaatgcgggaaatggaagcagatcttgctgagactattctggagttgcagaaaactcgt
gagatgctatgcttacagcataaaatcaacaatgattaccaggaggagctgaaaactgta
aagctcagattagaatgtgaaagtcgagagaatgaggaaaaggtacgtcactatgagacc
agacttcttcagcggaactccagagtccagatgttggaagctcagctgaaagacattgca
tatggcacatttccattcagattaaatactgaagagtctccttcttctgaggttggaatc
tccccgtcgccatctctgcatcgtggggaaactctgtttgaggttcatattgaagagatc
tgcttcaacccttatggcataagaatgattggagaccctgaaccaatcacattctgtatt
tattccctctatgactttgagacccatgcaacccctgttgttgcaggagtcaggcctcat
tacaacttcacatctcgctatgcagtaactccagatcccgaattcctgcgctacctaaga
gttgggacactaacccttgagctttatcaggttaaaggagttgaccactatgaactagca
agaggacgtctgaaactagaatccgcactgcagactacagacagagtgcacaactctacc
attctaactgacgaagctggggagaccattgcggaactgagttactggctgcggctgcat
ggacccctgtcccatgttcagtgtcttcaaagacaaagaaacaaagcacacggctactta
tctactcgcagacatggaaatacagaaaagttctggaaatcacctttaaatagcggcctc
cagaatgaactgatcatcaagatatggggatgtagaagtctaaaagcaagttatttgggc
caccaaccaagtccatacattgtatatcgcttttaccattatccagaccatacaacctct
attataccctgtagcaacaaccctcagtttgggtatgaagcggtctatcccctacagatg
acgattgagctggagcgctatctccaacaggagcgcctgtgtatttatgtgtttgatgat
gaagaaactcagtctggagtttacctggggaaggctgaggtgccacttctgagactggca
cagggaaacagcattaaaggtgattttgggctcatgaatcctcatggcatgtgtgttggt
tcggtacagattaacttggaatggaaaactccttatcatgagcctggtcagagcctctgg
gaatcatctatcagtgatgcttcaaggattaatttaaacagttctggaccatccaaatca
cgaaaggctgaggaggaactgcagagagatgtgagcgctaacaaaagaggaagaagagat
ccttactcaacagacaatccagaaagaggcaagaagcagaaagaggcaagacgttctccc
tcaactccccatcaccagagtgatgagatggacatgaatgtggaggatattttgatagga
ccagaagtaaaacaggatggacatgaagaagagataaatgaatcagatcagcaaacaata
tatgtcaactcctttaaagcagtcagacaagccctaccaaaaggcaatacattaaatagc
cttgatgaatcactcattacagatagtgatgatgatgatgatgatattgtcatatcccca
gaaccattacttacatataaattgtcttcatccaggatgcgggtggaggtggcctctcta
actttagacccttgctcacatgtggcaactgataaatcagtggaaagagtgtttgtggaa
tttcattttcctggtgttcctcctgaagaaacagaaacccctttatcacttcgcaagcct
atcaatggtgaagaaatattctaccatttcagcaaagtgatccatcttgctggtgaaaac
catgtcgaacgtagacatttcctcgatatgcttctacagggatcagactctgcaggagaa
agagtcaggttaacgtttacagtggtaagcgatccaataaatgaagaagaagatgagtgt
cgtgatttaggatatgcctatctagacctgaggaacctattaagaagagatgtagagcca
gcagaagaaactctacaggtttcaaatgtaactgatccaagagaaataattggaactcta
cgtgtggtaatagaagccagagaagcagcacgggctgtgtacagagagagaaaaatgaag
tctagagtccaatga
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integrated database retrieval system
