Bufo bufo (common toad): 120991572
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Entry
120991572 CDS
T07950
Symbol
SMG9
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120991572 (SMG9)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120991572 (SMG9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
NB-ARC
AAA_14
AAA_18
DUF6079
Motif
Other DBs
NCBI-GeneID:
120991572
NCBI-ProteinID:
XP_040276292
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Position
1:complement(11401894..11416383)
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AA seq
507 aa
AA seq
DB search
MSDSGHSQPSMYVPGRNRRRRWMDQGPFGNLNLSEPGRERDPTLRDRDQDRWDGNDDNSG
YTMQKTPIILAKPTAERPKPTSAPPALEKPIVLMKAREEGKPAPTAEGASLTPTAATAKV
EKEGQRPTQPVYQIQNRGMAAAAANAGGNVDPVVGQAKLMPPQKMKHSIKLVDEYMNWCD
SAIEFLLDQTDVLVVGILGLQGSGKSTMMSLLSANSPDDDQRAYVFRMQSQEVRERAGNQ
TSGIDFFISQERIIFLDTQPILSPAILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLF
TVCHVVVVVQDWFTDFNLYRFLQTAEMLKPSTPSPSHESSGSSGGDEGIEYYPHIVFLQN
KAKREDFCPRTLKQMNMVVDKLMLHSRLRYKGTVSMLDCNIFPGLPYDFLESEVNLFLIP
TMENDTDEANSRAGSGGNPAFPVLPAYKGHPSFHTMISKLRSQIMSMSRPQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLLG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctggacacagccagcccagtatgtacgtccccgggcgcaataggaggcgt
cgctggatggaccagggccctttcgggaatctgaacctctccgaacctggccgagagaga
gaccccacgttacgagaccgggatcaagacagatgggatggaaatgacgataactctggc
tacaccatgcagaagactcccatcatcctggcgaagcccactgcagagcggccaaagccg
acgtcagccccgcctgctctggaaaagcccatcgtacttatgaaggccagagaggagggt
aagccggccccgacagcagagggcgccagcctcacgccgacagccgccacagccaaggtg
gagaaagaaggacagcgcccaacacagcccgtgtatcagatacagaacaggggcatggcg
gctgcagcggcgaatgccggcggtaacgtggatccggtggtcggtcaggcgaagctgatg
ccccctcagaagatgaagcacagcattaagctggtggatgagtacatgaactggtgtgac
agcgccattgagttcttgctggatcagacagacgtcctggttgtcggcatccttggcctc
cagggctccggcaagtccaccatgatgtcccttctgtctgccaactctccagatgacgac
cagagggcgtacgtcttcaggatgcaaagtcaagaggtgagagagcgagctgggaaccag
acgagcggcatcgacttcttcatcagtcaggagaggattatcttcctggacacgcagccc
atcctgagtccggccatattggaccatctgatcaataacgaccggaaactgccccccgaa
tacaatctgccacacacttatgtggagatgcagtccttacagatcgcggccttcttgttc
acggtctgtcatgtcgtcgtcgtggtccaggactggttcacagactttaacttgtaccgg
ttcctgcagaccgccgagatgctgaaaccgtctaccccttctcccagtcatgagtctagt
gggtcatctggaggggatgaaggcatcgagtattacccccacatagtgttcctacaaaat
aaagccaaaagagaagacttctgtccccgcaccttgaagcagatgaacatggtggttgac
aagctcatgcttcactcgcgcctgcggtacaaaggcaccgtctccatgttggactgcaac
atctttcctgggttaccctatgacttcctggaatcggaagtgaatttatttctaatacca
accatggagaacgatactgatgaagccaactccagagcaggatcaggaggaaatccagcg
ttccctgtcctgccggcgtacaaggggcaccccagcttccacaccatgatcagtaaactc
cgaagccagattatgtccatgtcacggccgcagctttcacataccatcctgacggaaaag
aactggttccactatgccgctcgtatctgggacggggtgaagaagtcgtcggcactttct
gagtacagcaggttactgggctag
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