Bufo bufo (common toad): 120993795
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Entry
120993795 CDS
T07950
Name
(RefSeq) collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120993795
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120993795
09142 Cell motility
04820 Cytoskeleton in muscle cells
120993795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbuf00535
]
120993795
Proteoglycans [BR:
bbuf00535
]
Extracellular matrix (ECM) proteoglycans
Others
120993795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120993795
NCBI-ProteinID:
XP_040278200
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All DBs
Position
3:complement(360939346..361095589)
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AA seq
1108 aa
AA seq
DB search
METIVTKERGDTSRRINTVIQRKFGQRKESGKAGRQSLWVLNGGRVGCHLALRRTDTGLQ
GPPGPPGPPGPPGIPGSDGIDGEEGPKGPPGEPGEKGDRGARGVIGQFGAMGPKGNNGLP
GIDGKDGTPGVPGLKGSPGQNGIHGSPGHQGLPGLPGQSGSKGEIGQKGEPGSRGEPGFT
GAPGKQGERGPSGEAGPRGIVGMKGDRGERGPVGPVGVDGKVGAKGEQGPPGIPGPQGIP
GVKGDKGFLGKVGGKGDVGDPGVEGLAGEKGEKGDSGEPGPKGQQGVHGELGYTGPTGDP
GQFGIQGLAGLPGPRGLNGERGVPGMPGRPGVPGRDAGDQHIIEVVLKMLQEQLAAVAVS
AQREALGGAGIVGPPGPPGPPGPSGEQGEHGPHGPRGIPGILGVMGQIGNTGPKGKRGEK
GDQGETGRGHQGLPGPPGIPGLPGIPGQAINGKDGERGPEGAAGQPGRPGLPGPNGLPGF
CEAAACLAASAYAPASLTEPGTIKGGSKVNSDGQSGLPGPSGKPVSMNAYFITVLDLISY
NGNPGPVGLPGEIGATGPKGIKGPLGSSGPPGPPGKPGPSGSILGLEGSADFLCPSNCPP
GPKGPQGLQGVKGHKGRPGPLGEPGQQGKAGPKGDVGISGEQGIPGPPGPQGIRGFPGMT
GPKGETGPTGYKGMIGSVGAAGKPGEEGPKGPPGEPGEKGDRGARGVIGQFGAMGPKGNN
GLPGIDGKDGTPGVPGLKGSPGQNGIHGSPGHQGLPGLPGQSGSKGEIGQKGEPGSRGEP
GFTGAPGKQGERGPSGEAGPRGIVGMKGDRGERGPVGPVGVDGKVGAKGEQGPPGIPGPQ
GIPGVKGDKGFLGKVGGKGDVGDPGVEGLAGEKGEKGDSGEPGPKGQQGVHGELGYTGPT
GDPGQFGIQGLAGLPGPRGLNGERGVPGMPGRPGVPGRDAGDQHIIEVVLKMLQEQLAAV
AVSAQREALGGAGIVGPPGPPGPPGPSGEQGEHGPHGPRGIPGILGVMGQIGNTGPKGKR
GEKGDQGETGRGHQGLPGPPGIPGLPGIPGQAINGKDGERGPEGAAGQPGRPGLPGPNGL
PGFCEAAACLAASAYAPASLTEPGTIKG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatagttacaaaagaacgaggagacaccagcagaagaattaacacggttatt
cagagaaaattcggccaacggaaggaatctggaaaagctgggcgacaatcgctgtgggtg
cttaatggtggccgtgttggttgtcacctagctttgcgaagaacagatactggtctacaa
ggtccaccagggcctcctggtccacctggccctccagggatcccgggatcagatggcata
gatggcgaggaggggccaaaggggcctccaggagagcctggtgagaaaggagataggggt
gctcggggagttattggacagtttggagcaatgggaccaaagggaaacaacggcctacct
ggtattgacggcaaggatggtaccccaggtgttcctggattaaagggtagccctggccaa
aatggcatccatggttctcctggccatcaagggttaccaggtttacctggtcagtcaggc
agtaaaggagaaattggacaaaagggagagccaggctctcggggagaaccaggattcact
ggagcacctggaaagcagggagagagaggtccgtctggagaagctggtcccaggggcatt
gttggaatgaagggggaccgtggtgaaagaggaccagttgggcctgtcggagtggatggg
aaagtcggagcaaaaggtgaacagggtcctcctggcataccaggaccacagggtattcct
ggagtaaaaggagacaagggcttcctaggaaaggttggaggaaaaggcgacgtgggtgat
ccaggagttgaaggtctagctggagagaaaggagaaaagggtgactctggtgaaccaggc
cccaagggccagcaaggtgtacatggagaacttgggtatacaggaccaacaggagatcct
ggccagtttggaatacaaggccttgcaggcctaccaggtccaagaggacttaatggagag
aggggtgtccctgggatgcctggacgcccaggagttcctggaagagatgcaggagatcag
cacataatcgaagttgttctgaaaatgttgcaagagcaactagcagcagtagctgtcagt
gcccagagggaagcccttggtggagctggaatcgtgggaccacctggacctccaggtcca
ccagggccatctggagaacagggagaacatggaccacatgggcctcggggtatccctggc
attctgggtgttatgggccaaattggaaatacaggacctaaaggtaaacgtggagagaag
ggagatcagggagaaacaggccgtggacaccaaggtcttcctggacctcctggaattcca
ggtctccctggcattcctggtcaggccattaatggaaaagatggggaaagaggcccagaa
ggtgctgcaggacaacctggtagacctggcttgcccggaccaaatggtctgccaggattt
tgtgaagcagcagcatgtttggctgcatctgcatatgccccagcctctctgactgaacct
ggcaccatcaaaggaggaagcaaagtgaactctgatggccagtctggacttccaggacca
tcaggaaagccagtgagtatgaatgcttatttcatcactgtattggatttgataagttac
aatggtaatccagggcctgttgggcttcctggagaaattggagccacaggaccaaagggc
ataaaaggtcctcttgggtcttcaggtccacctggacctcctggaaaaccaggtccttca
gggagcattctaggcttggaaggcagtgccgatttcctgtgcccatccaactgcccacct
ggtccaaagggtccacaaggtcttcaaggggttaagggtcacaaaggacgccctggtcca
cttggtgagcctggacaacaaggaaaagctggtccaaaaggagatgttggtatttctgga
gaacaaggaattccaggacccccgggcccacagggtatccgtggttttccaggaatgact
ggacccaaaggagaaacaggacccaccggatataaggggatgatcggatcagtaggtgca
gcagggaagcctggcgaggaggggccaaaggggcctccaggagagcctggtgagaaagga
gataggggtgctcggggagttattggacagtttggagcaatgggaccaaagggaaacaac
ggcctacctggtattgacggcaaggatggtaccccaggtgttcctggattaaagggtagc
cctggccaaaatggcatccatggttctcctggccatcaagggttaccaggtttacctggt
cagtcaggcagtaaaggagaaattggacaaaagggagagccaggctctcggggagaacca
ggattcactggagcacctggaaagcagggagagagaggtccgtctggagaagctggtccc
aggggcattgttggaatgaagggggaccgtggtgaaagaggaccagttgggcctgtcgga
gtggatgggaaagtcggagcaaaaggtgaacagggtcctcctggcataccaggaccacag
ggtattcctggagtaaaaggagacaagggcttcctaggaaaggttggaggaaaaggcgac
gtgggtgatccaggagttgaaggtctagctggagagaaaggagaaaagggtgactctggt
gaaccaggccccaagggccagcaaggtgtacatggagaacttgggtatacaggaccaaca
ggagatcctggccagtttggaatacaaggccttgcaggcctaccaggtccaagaggactt
aatggagagaggggtgtccctgggatgcctggacgcccaggagttcctggaagagatgca
ggagatcagcacataatcgaagttgttctgaaaatgttgcaagagcaactagcagcagta
gctgtcagtgcccagagggaagcccttggtggagctggaatcgtgggaccacctggacct
ccaggtccaccagggccatctggagaacagggagaacatggaccacatgggcctcggggt
atccctggcattctgggtgttatgggccaaattggaaatacaggacctaaaggtaaacgt
ggagagaagggagatcagggagaaacaggccgtggacaccaaggtcttcctggacctcct
ggaattccaggtctccctggcattcctggtcaggccattaatggaaaagatggggaaaga
ggcccagaaggtgctgcaggacaacctggtagacctggcttgcccggaccaaatggtctg
ccaggattttgtgaagcagcagcatgtttggctgcatctgcatatgccccagcctctctg
actgaacctggcaccatcaaaggttaa
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integrated database retrieval system