Bufo bufo (common toad): 120994007
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Entry
120994007 CDS
T07950
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120994007 (ZC3H12C)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120994007 (ZC3H12C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
PRORP
Motif
Other DBs
NCBI-GeneID:
120994007
NCBI-ProteinID:
XP_040278402
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Position
3:649384136..649415391
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AA seq
876 aa
AA seq
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MLSSREFRSFYQGFRNNNKVESDTCTGFMGLKDDFGHSFGRLYTETGDTHLSAIVPWTIL
RKPTMDKVNSRKDDSDKDTSEGTCSSSCDSEESTNSDNESELSSRLVVEPCRVTKKHRQL
CRSPCIEPYILKRNEILEDLKSEHDQTESKEIKKPPDEVKEYQTKLDFALKLGYSEEQVL
LVLNKLGTNALINDILGELVKLGSKSETEQNGGVSNTVLREASSFESQRPESPFHQEAID
DSENLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVTWFQDRGHKDITVFVPAWRKEQSRPD
ALITDQEILRRLEKDKFLVFTPSRRVQGRRVVCYDDRFIVKLAFESEGIIVSNDNYRDLA
NEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEYKKQPCPYGK
KCTYGHKCKYYHPERGNQPQRSVADELRAMSRSNIAKSANEVGLVKSNSVPSNTKIDSNS
DGKRSAPKRQSDPSIRTQAYDLEEKLPSKNKLETRSVPSLVSISSMKPQSTTPSRNGLLT
TVHLPSQDQIPPGLYSPMLMSTKNHGTISCEQYPKCESPVDIGYYSMMNAYSNLGISGTR
SPERRFSLDTDYRISSVASDCSSEGSLSCGSSDSYAGYNDRSYVSSPDPQLEDNMKCQHI
HSHNRSQAFMQGYHDSLTRVQSFGHEQEVKHHHKTIPPYMSLPLQHPVVAARSSCPNEYH
VSQKSPASKNGIMGRSLVSTRMESISDSRLYESPPQRQHKTYLSQESPRNWDRMSYGDAY
GYRPNYPMLGNPSQPCYEQFAFQSPPESQDPSWRVPYCGIPQEPQRFSNTREKIFVNLCN
IFPAELVRLVMKRNPHVTDAQQLAAAILVEKSQCGY
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctcccgggaattcaggtcattttatcaaggcttcagaaataataacaaggtg
gagtcggacacatgcaccggcttcatgggcttgaaagatgactttggccatagctttggg
cgcctttacacagagactggtgatacacacttaagtgcaattgtaccgtggactatactg
cggaagccaaccatggataaagttaattccaggaaggatgattcagacaaagatacctcg
gaagggacctgtagttcgagctgtgactcggaagaaagcacaaattctgataacgagtct
gagctgtcaagtagacttgtagtagaaccctgccgggtgaccaagaagcatagacaactc
tgtcgttctccttgcatcgagccgtacatactaaaaaggaatgagattctagaagacctt
aaaagtgaacacgaccaaacagaatctaaggagataaagaaaccaccagatgaagtaaag
gaataccaaacgaaattggactttgcacttaaattgggttactccgaagaacaggttctt
cttgtcctcaacaaacttggtacaaatgctttaattaatgacattctaggagaacttgtc
aagcttggcagcaagagtgagactgaacaaaatggtggagtgagtaataccgttctacgg
gaagcatcttccttcgagtctcaacgacctgaatctccttttcatcaggaggcaatagat
gacagtgaaaacctaagaccaattgtaattgacgggagcaatgttgccatgagtcatgga
aataaagaggtattttcttgccgtgggatcaagcttgctgtcacctggttccaggataga
gggcataaggatattacagtatttgtgcctgcctggcggaaggaacagtcacggcctgac
gctcttattactgatcaagaaatcctacggaggttggagaaggacaagttcctggtattt
acaccgtcacggcgggtgcagggcagaagagttgtctgctacgatgatcgctttatagtc
aagctggcttttgagtcggaaggcattatcgtgtcaaatgataactatagggatctggca
aacgagaagcctgagtggaagaagttcattgatgagagactgctcatgtattcatttgtc
aatgacaaatttatgccacctgatgatcccctaggccgccatggaccaagcttggataat
tttttaagaaagaagcctgtagtgcctgagtacaagaagcagccttgtccttatggaaag
aaatgtacctatggacataagtgcaagtattaccatccagaaagaggaaatcaacctcag
cgttcagtagcagatgaacttcgtgctatgtctcggagcaacattgccaagtctgccaat
gaagttgggctagtcaagagcaacagtgttccatcaaacaccaagattgactccaactca
gatggaaagcgctcagccccaaagaggcaatcagaccccagtattagaactcaggcttat
gacttggaggagaagcttccctccaaaaacaagttggaaacaaggtctgtgccatcctta
gttagtatatcaagtatgaaaccccaaagtacaactccatctcgaaatggcttacttact
actgtgcatttaccatctcaggaccaaataccacccggactctactctccaatgctaatg
tccacaaaaaatcatgggacgatctcatgtgaacagtaccccaaatgtgaatctccagtg
gatattggatattattccatgatgaatgcttactcaaacctcggtatatctggaacccgg
agtccagaacggcgtttttcactagacacagattacaggattagctctgtggcatctgac
tgcagcagtgaaggtagtttgagctgtggaagtagtgattcctatgcaggatacaatgac
cgttcctatgttagctcccctgatccacaactggaagataatatgaagtgccagcacatt
cattcacacaatcgttctcaagcattcatgcaaggctaccatgactctttgactagagtt
caaagttttgggcatgaacaagaggtgaagcatcaccacaagacgataccaccttatatg
tctttgcctctgcagcatcctgtcgttgcagcaaggtcaagttgtccaaatgagtaccac
gttagccaaaaatcgcctgcatcaaagaatggaattatgggaagatctctggtgtctaca
agaatggaaagcatctcagattcaagactatatgaaagcccaccacagcgtcaacacaaa
acctatttaagtcaagaaagtcccagaaactgggatcgaatgagttatggagatgcttat
ggttatcgaccaaactacccaatgctgggtaacccttcccaaccatgttatgagcaattt
gctttccaaagcccaccagaaagccaagatccttcttggagggtaccatattgtggaatc
cctcaggaaccccaaagattttcaaataccagagaaaagatttttgtgaacttgtgcaac
atctttccagcagaacttgtgcgactagtgatgaaaagaaacccgcatgtcactgatgcc
caacagcttgcggcagccattttggtggaaaaatcccagtgtggatattga
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