Bufo bufo (common toad): 120994505
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Entry
120994505 CDS
T07950
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120994505 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
120994505 (RUNX1)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
120994505 (RUNX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
120994505
NCBI-ProteinID:
XP_040279065
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Position
3:41825653..42069953
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AA seq
472 aa
AA seq
DB search
MASNSIFETFPLYAAGFIKDTSTSRRFTPPSTTLSPGKMTDTLPLSAPDGSAALVGKLRN
ADRNMVEVLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM
AGNDENYSAELRNATAAMKSQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAI
KITVDGPREPRRHRQKLDEQIKPGMSFSERLSELEQLRRTAVRVSPHHPTPAPNHRSSLN
HSTVFNPQTQTQIQDTRQVQTSPSWSYDQSYQYLGSIATPSVHPATPISPGRASGMTSLS
AELSSRLSGAPDLTAFSDPRVGIDRQFSTLSSISDPRMHYPGAFTYTPTPVSSGIGIGMS
AMTSATRYHTYLPPPYPGSSQAQGSPFQASSPSYHLYYGTSAGSYQFSMMSGGDRSPPRI
LPPCTNASTGATLLNPNLPNQSDVVETEGSHSNSPTNMGTTPRLEEAVWRPY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatctttgagacgtttcctttatatgcggcaggtttcatcaaggat
accagcaccagccgccgcttcacgccgccctccaccaccctcagcccagggaagatgacc
gacaccttacccctgagtgcaccggatggcagcgccgccctggtgggcaaactgagaaac
gcagaccggaacatggtggaggtcctgtctgatcatcctggagaactggtccgtacagac
agtccgaactttctgtgctcggtgctgcccacacactggaggtgcaacaagaccctgccc
attgccttcaaggtggtggcgctaggggacgtcccggacggaacattggtcactgtcatg
gctggcaatgatgagaattattcggcagaactccgcaatgccacagcggcaatgaagagc
caggttgctcggtttaatgacctgagatttgtcggaaggtctggaagaggtaaaagcttc
actctcaccatcacagtcttcaccaaccctcctcaagtggcgacttaccatcgagccatt
aaaatcactgtggacggacctcgggaaccaagacggcatcggcaaaagttagacgagcag
attaaaccaggcatgtcgttttccgagcggctcagcgaactggagcagttgcgccgaacg
gcagtgagggtcagtccgcaccatccgaccccagctcccaaccacaggtcgtctctgaac
cactccacagttttcaatcctcagacccagactcagatacaagacacaagacaagttcag
acatctccgtcctggtcctatgaccagtcctatcagtaccttgggtccatcgccacacct
tctgtccacccggccacccccatctcacccggacgtgccagcggaatgacgtccctcagc
gccgagctctccagtcggttatcaggggcgccagacctgaccgcattcagcgaccctcga
gtcgggatcgatcgtcagttctccaccctttcgtcgatttcagatccacgcatgcactat
cccggagcgtttacatataccccaaccccggtgtcttcaggcattggaattggtatgtcc
gccatgaccagtgctaccagataccacacctacttaccacctccatatcctggatcttct
caagctcaaggaagcccattccaggccagctccccttcataccatctctactatggaacc
tcagctgggtcttaccagttttccatgatgtccggaggagacaggtcaccgcctcgcatc
cttcctccttgcactaatgcttccacgggagcaactcttctcaaccccaacctacctaac
caaagcgacgtggtcgagacagaaggaagtcacagcaactctccaaccaacatgggcacc
acgccaaggttggaggaagcggtatggagaccctactga
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