Bufo bufo (common toad): 120994668
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Entry
120994668 CDS
T07950
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120994668 (SUPT6H)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120994668 (SUPT6H)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120994668 (SUPT6H)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120994668 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
120994668
NCBI-ProteinID:
XP_040279334
LinkDB
All DBs
Position
3:99747657..99815304
Genome browser
AA seq
1728 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVQRSNKKFVQEDDDEEEEDENPDEQDEQGNLKDFINDD
DEEDEEEEEDAGSESGGSDEEIGHKPRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVK
KMSDDEDEEEDAGKEEHEKEAIADEIFQDGEDDDRHDLGEQPVIAADDDEEEEEEESDID
DFIVDDDGQPLKKPKWRKKLPGYADAALQEAQEIFGVDFDYDEFEKYNEDDEEMEEYEYE
DEDAEGETRVRPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRTTDLPERFQLRTI
PVKSAEDDELEEEADWIYRNAFSTLTISQQESCDYLERGQVGSNFGRKGPSTIQKIREAL
NFMRNQHFEVPFIAFYRKEYVEPELNINDLWRVWQWDEKWTQLRMRKQNLMRLFQKMQAY
QYEQISADPDKPLADEVRPLDTTDMERLKDVRSMDELRDVYNHFLLYYGRDIPKMQNAAK
SSQKKLKRIPEEGEEEGAEAAEQDEEHKGPELKQASRRDMYSICQCAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFTTPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERGKINLVPTKKGRKEIDEAHFAYPFKYLKNKLVKELRDEQFLKMCIAEEEG
LITIEMSIDMKDVEGFGNEQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERSLKQFLYP
QMGKELKSKLLLEAKEFVVKSCSRKLYNWLKVAPYRPDQQVEEDDDFMEENQGKGIRVLG
MAFSSARDHPVFCSLINGEGEVTDFLRLPYFTKRKNAWREEERERKTQDMETLKKFLLSK
KPHVVAIAGENRDAQMMVDDVKRIVHELEQAQQMSSIGVELVDNELAVLYMNSKKSECDF
RDYPPILRQAVSIARRIQDALIEFSQVCSTDEDILCLKLHPLQDQVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPYTQSLIQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTNSLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTLYRS
ANPEEVFNMLTRETPETFYIGKLITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAVGVKTRLDNGVTGFIPTKFISDKVVKRPEERVKVGMTV
HCRIMKVNIEKFSVDMTCRTSDLMDKNNEWKLPKDTYYDFDTEGAHQKQEEELKKKQQRT
TYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSEGIYQHVDV
REEGKENAFSLGSTLWINNEEFEDLDEIIARFVQPMASFARDLINHKYYQDCNFGDKKKL
EELLIKTKKEKPTFIPYYICASKELPGKFLLGYQPRAKPRVEYVTVTPEGFRYRGQVFST
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASQSATPANINLADLTRAVNALPQNMTSQM
FNAIAAVTGQHGQNPNATPAQWASSQYGYGGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYATPSQPIATPQYHQLPPSATSTPVPTPQSSHSQSSSSSRSRQQSKPSSQTPIDWGKMA
EKWLHEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttgtggaaagtgaagccgaggagtctgaggaagaatacaacgatgatggg
gaggtggtacagagatccaacaaaaagtttgtccaagaagatgatgatgaagaggaggag
gatgaaaatccagatgaacaggatgaacaaggaaacttaaaagattttataaatgacgat
gatgaggaagatgaggaggaggaggaggatgcagggagtgagtctggaggctcagacgag
gaaattggccacaaacccagaaagcgcacatttgatgacagactagaagacgatgatttt
gatctcattgaagaaaacttgggtgttaaagtaaaacgtcaaaagttcaggcgagtgaaa
aaaatgtcagacgatgaagacgaagaggaagatgctggaaaagaggagcatgaaaaagaa
gccattgcggatgaaatcttccaggatggtgaggacgatgatagacatgacttaggtgaa
cagccagttatagctgctgacgatgatgaagaggaggaggaagaggaatctgacattgat
gatttcattgttgacgatgatggacagccattgaaaaaacccaaatggaggaaaaagctc
ccaggatatgctgatgctgcattgcaggaagctcaggagatcttcggtgtagattttgat
tatgatgagtttgaaaaatacaatgaagatgatgaggaaatggaagagtatgaatatgag
gatgaagatgcagaaggagaaactcgtgtcagacccaagaaaaccgctaagaagcgtgta
agccgacgcagcatctttgaaatctatgagccaagtgaactagagagcagccacttaact
gaccaagataacgagatccggaccacagatctgccggagagattccagttgcggacaata
ccagttaaatctgctgaagatgatgaactggaggaagaggctgactggatctacaggaat
gcattttcaacgctaactatttctcaacaggaaagctgtgattacttggaacgtggtcaa
gttggcagcaacttcggtcgcaaaggaccgagcactatacagaaaatccgagaggctttg
aatttcatgagaaatcagcactttgaggtgccctttattgcattttatagaaaagagtat
gtggaaccggagctaaacatcaatgacttatggcgtgtctggcagtgggatgaaaagtgg
actcaactcaggatgaggaagcaaaatctgatgcgtctgtttcagaagatgcaggcctat
cagtatgagcagatctcagctgatcctgacaagccacttgcagatgaagtaagacctttg
gataccacggacatggagagactgaaagacgtccggtcaatggatgaactgagggatgtt
tataatcactttttgctgtattatggaagggatattccgaaaatgcagaatgcagccaag
tccagccagaagaaactgaagcgcatccctgaggagggtgaagaagaaggagcagaggct
gctgaacaagacgaggagcataaaggtccggagttaaagcaggcttcacgtagagatatg
tattctatctgtcaatgtgctggtttggatggtttggcaaagaagtttggattgacacca
gagcagtttggtgagaacttgagagacagttatcagcgtcatgagacagaacaatttcca
gccgaacctttagaacttgctaaagattatgtatgcagtcaattcaccactccagaggcc
gtgcttgaaggtgctcggtatatggttgctctgcagattgcgagggaaccattggtcagg
caggttcttagacaaaccttccaggaaagagggaagataaaccttgttccaaccaagaag
ggcagaaaggaaattgatgaagcccattttgcatatccattcaaatacctgaagaacaaa
cttgttaaagagcttagagatgaacagtttcttaagatgtgcattgctgaagaagaagga
ctgattacgattgagatgtctattgatatgaaggatgttgaaggtttcggcaatgagcag
acctactttgaagagatcaagcagttctattacagagatgagttcagtcaccaagtacaa
gaatggaacaggcagagaactctggcaattgaacgttccctaaaacaatttctttacccc
caaatgggcaaagagttaaagagcaaactactactggaggctaaagagtttgtagtaaag
tcttgtagccgtaagctgtacaactggctgaaggtggcgccataccgtcccgaccaacaa
gttgaagaagatgatgacttcatggaggagaaccaaggcaaaggaattcgtgtattaggc
atggccttctcttctgctagagatcaccctgtgttttgctccctgattaatggagagggc
gaagtgacagacttcttgcgcctgccgtactttaccaaaagaaagaacgcatggagggaa
gaggaaagagagaggaagactcaagacatggagacgcttaaaaagtttttgctaagcaag
aaacctcacgtggttgccatagctggtgaaaatagagatgcgcaaatgatggttgatgat
gttaaacgcattgttcatgagcttgagcaagcccagcagatgtcctctattggagtggaa
ctggtggacaatgagttggcagtgctgtatatgaacagcaaaaaatctgaatgtgacttc
cgtgattatcctccaattttacgccaggcagtttccatagctcgacgcattcaagacgcg
ttgattgagttttctcaagtctgcagcactgatgaagatattttgtgcctgaaattgcat
ccattacaagatcaggtagtgaaagaagaactgcttaatgccctgtattgcgaatttatc
aaccgagtaaatgaggtgggagtggatgtcaatagggccattgctcatccatacactcag
tcgctcattcaatacgtctgcggacttggaccccgtaaaggcactcacctgctgaagatc
cttaagcagaataatacgcggttggaaaatcgcactcagctggttactatgtgtcacatg
ggtcccaaagttttcatcaactgtgctggcttcattaagattgacacaaattctcttggt
gacagtacggattcctacattgaagtcctagacggctcacgagtgcatccagaaacttat
gagtgggctcgaaagatggcagtagatgccctagagtatgatgagtcggctgaagatgcc
aaccctgctggagcgctagaagagattctagaaaatcctgaaagattaaaagatctcgat
ctggatgcatttgcagaggaacttgagagacagggctatggagataaacatattacattg
tacgatattcgtgcggagctaagctgcagatacaaagaccttaggactctataccgatca
gccaaccctgaagaagtattcaacatgctgaccagggaaacaccagagactttctacata
ggtaaacttatcacctgtaatgtgactggaattgcccacagacgaccccaaggagaaagt
tatgaccaagcaatcaggaatgacgagacaggtctttggcagtgtcccttctgtcagcaa
gataactttccagagcttagtgaggtatggaatcattttgacagtggctcctgtcctggt
caagcagttggtgttaaaaccaggctggacaatggtgtaactggctttattccaaccaag
tttatcagtgataaagtagtgaagcggcccgaagaacgagtcaaggtgggcatgactgtc
cattgtcgaataatgaaagttaatattgagaagttcagcgtggacatgacttgtcgtaca
tctgatctcatggacaaaaacaatgagtggaagttacccaaggacacttattatgacttt
gacactgagggtgcacatcaaaaacaagaggaagagctgaagaagaagcagcagcgtacc
acttacatcaagcgagtcattgcacatccatcattccacaatataaactttaagcaagca
gagaagatgatggagacaatggatcagggcgatgtgatcatccgaccaagcagtaaggga
gaaaatcatctaaccgtcacctggaaggtcagcgagggaatctaccaacatgtggatgta
cgagaggaggggaaagaaaatgccttcagcttggggtccacattatggattaataatgag
gaatttgaggacttggatgaaatcattgctcgatttgtccaaccaatggcttcttttgca
agagatctaattaaccacaagtactaccaagactgcaactttggagacaagaagaaacta
gaagagctcttaataaaaacaaagaaggaaaaacctacattcattccatattatatatgt
gccagtaaagaactccctggtaaatttttactgggatatcagccacgtgctaaaccaaga
gtggaatatgtgaccgtaacacctgaaggcttcagatatcgggggcaagtattctcaaca
gtcaatggacttttcaggtggtttaaagaccactaccaggatcctgtaccaggtatcacg
ccaagtagcagcagcagaacaaggactccggcctcccagagtgccacccctgccaatatt
aatcttgcagatctcactcgtgctgtcaatgccttgccacaaaacatgacttcgcagatg
tttaatgcaattgctgcagtcacaggacaacatgggcaaaaccctaatgccacccctgcc
caatgggcatccagccagtatggttatggtggaggcagtggtggcgggagcagtgcatat
catgtgttcacaactcccgctcagcaacctgtggctactcctctgatgaccccaagctat
tcctatgctactcctagccagcctattgctacaccacagtaccatcagctgccaccaagt
gccacatctaccccagtacctactccacaatcctcccattcacaaagcagttcaagctcc
cgaagcaggcaacagtctaaaccaagcagtcaaacgcctatcgactggggaaaaatggca
gagaagtggctgcatgaaaaagaggcagaaaggcggaaacagaagcagcgcttaactcct
cgtccttcgccaagtcccatgattgaaagtacgcccatgtcaattgcaggggatgccaca
ccactactagatgaaatggaccggtga
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integrated database retrieval system
