Bufo bufo (common toad): 120994754
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Entry
120994754 CDS
T07950
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120994754 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120994754 (SCARF1)
Membrane trafficking [BR:
bbuf04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120994754 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
120994754
NCBI-ProteinID:
XP_040279479
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All DBs
Position
3:complement(124440195..124490283)
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AA seq
893 aa
AA seq
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MTSYSRRLKLMLIMWTWLPRLNSQDLDPAGKNVCTSDSVTRGLVCCPGWKQEGRECTAAI
CEGADACKTDEICIRPGVCRCKPGFFGADCNSPCPDQYWGSDCKQRCSCHPFGKCDGVTG
KCTCYPKRWGPACQNPCHCGPHGNCDQLTGSCKCEPGWWAQHCNKQCVCNPDTSHCNQTN
GQCMCYSGWWGYRCSIKCNCNGSPCLQTKGNCMCREGWYGPGCEHHCDCVNGKCNSKSGE
CECYMGYKGKRCIDTCPAGYYGPKCEKRCGKCKLGQTCSPFNGSCVSCEPGWTGARCDLP
CSKGYYGENCTQNCPKCLGEEECSRENGTCLNCDPGKTGSRCEFFCPAGSYGSRCNNLCP
LCIHGNCDPVTGECVCDSGYWKPSCNETCPHGYYGSNCSSICDCSDGICDLKHGRCKLTS
SQKAAIVAGVLVPLCLLLLLCCCCCCCCCGNNEPEGKDRVSNSDRGCLSRMKHNFQGALV
NVGSFIPCCSVGNDKVSWVTVSHHDTELPFNHSFIESPSTGWLSENSFSSFESDEDGPVY
CVPPREGMSVADLDGFQEISSKCNVFPDAMALNTDDLSVPFSIPRTSSIAKSKRPSVSFA
EGTKFESRSSITDTPHLVRKPKLALSLPKLSSIQSQTMNAEESQKGEYNNEHYDTINCNP
ESEDHPKLQRSGPVGRRRTMSNAQKASFKGEVTEVGLKENSEMKRKVHNISTLYVTVGHP
RKPCKPRRKSEGNVDGAVQAVLKRFGSFQKGIPKPTRRSLLQYSNSKVTQPKDVYPEEVK
LMAKNSSNDKVQDRQTNEIVLPSSSIIKIHLSDGGIEKAGNPNKPENMYSNLHDPEMLEQ
AQTVDHIYQTADGREDAEPKYENISISNRCVNNELEPSPLYEDAEMNCDNPNS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttatagcagaaggctgaaactgatgctgataatgtggacctggcttccaaga
ctgaactctcaggacctggatcctgctggaaaaaatgtctgcacatctgacagtgtcacc
agggggctggtgtgctgcccaggctggaaacaggaagggagagagtgcacagctgcaatc
tgtgagggggccgatgcctgcaaaacagatgagatctgcataagaccaggagtgtgtcgt
tgtaaaccaggtttctttggtgctgattgcaattcaccatgccctgatcagtactggggt
tcagattgcaagcagaggtgttcatgtcatccctttggaaaatgtgatggggtgaccggc
aaatgtacctgctaccctaagagatgggggcctgcttgtcagaatccctgtcactgtggc
ccacatgggaactgcgaccaactcactggatcgtgtaaatgtgagccaggctggtgggct
cagcactgcaataaacaatgcgtgtgtaacccggacacgtctcactgcaaccagaccaat
ggacagtgtatgtgctacagcggatggtgggggtatcgatgcagcatcaaatgtaactgc
aacggatctccctgcctacaaacaaaaggaaactgcatgtgtcgagaaggctggtatgga
ccgggatgtgaacaccactgcgactgtgtgaatgggaaatgcaactccaaaagtggggaa
tgtgaatgttacatgggatacaaaggaaaaagatgcatagatacgtgtcctgctggatat
tacggaccaaaatgtgaaaaaagatgtggaaagtgcaaactgggccaaacatgttcccct
ttcaatggctcctgtgtgtcctgtgagcctggctggacgggagcacgctgtgatttgcct
tgttcaaagggatattatggagagaactgtacacagaattgtccaaaatgtcttggggaa
gaagaatgtagtcgagagaatgggacctgtttaaactgcgatcctgggaagacaggatcc
aggtgtgagtttttttgtcctgctggaagttatgggagcagatgcaacaacttgtgccca
ctctgcatccatgggaattgtgatccagtaacaggggagtgtgtctgtgactctggatac
tggaaaccaagctgcaatgaaacatgtcctcatggatattatggatccaactgttcaagc
atctgtgattgtagtgatggcatatgtgacctaaagcatggaagatgtaaactaacatcc
agccaaaaagcagccatagtcgctggagttctggttcctctctgcttgctattgctcctc
tgctgctgctgctgttgctgctgctgtgggaataatgaacccgagggtaaagacagagta
tctaacagtgacagaggatgtttatcaagaatgaagcacaatttccaaggagccctcgtt
aacgtaggctcctttataccatgctgttctgttgggaatgataaagtttcctgggttact
gtttctcatcatgacacagaactgcccttcaaccacagcttcattgaatccccctctaca
ggctggttatctgaaaactccttttcttcatttgaatcagatgaagatggacctgtgtac
tgtgttcctccaagagaaggaatgtctgttgctgacttggatgggtttcaagaaataagt
tcaaaatgcaatgtattccctgatgccatggctttaaacacagatgatctatccgttcca
ttttctatccctagaacttctagcattgcaaaatccaaaagaccatctgtatcatttgct
gaaggaaccaagtttgagagtagatcatctataacggacacaccccaccttgttcggaaa
ccaaaacttgctttgagtctccctaagttgtcctctatacagtcacagacaatgaatgca
gaagagtcacaaaagggtgaatataataatgagcattatgatacaataaactgtaatcct
gaatcagaggaccatcccaagctccagagaagtggtccagttggccgccggaggacaatg
tctaatgctcaaaaggcatcttttaaaggagaagtgacagaggttggcttaaaagaaaac
tctgaaatgaaacggaaggttcacaatatttctactctttatgtgactgttggtcatcca
agaaagccttgtaagcctcgcagaaagtcagaaggcaatgtggatggagcagtacaggca
gtgttgaaacggtttggcagttttcagaaaggaatcccaaaacctacaaggagaagtttg
ttacagtattcaaactcaaaagttactcagccaaaggatgtttatccagaagaggtcaaa
cttatggccaaaaactcttcaaatgataaagtacaagacagacaaacaaatgaaatagtt
cttccaagttcttctatcattaaaatacacttgtctgatggtggcatagagaaagcaggc
aatcctaataaacctgagaacatgtattccaacttgcatgatccagaaatgctggaacaa
gcccaaactgttgatcacatttaccaaactgcagatggtagagaagatgcagaaccaaag
tatgagaacataagtatatcaaacagatgtgtgaacaatgaactggaaccatctccctta
tatgaagatgcagaaatgaactgtgataatcctaattcttga
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