Bufo bufo (common toad): 120994757
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Entry
120994757 CDS
T07950
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120994757 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120994757 (PRPF8)
Spliceosome [BR:
bbuf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120994757 (PRPF8)
Complex C
U5 SnRNP specific factors
120994757 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
120994757
NCBI-ProteinID:
XP_040279485
LinkDB
All DBs
Position
3:complement(124655889..124691576)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRPGVPPMPGPPPVAPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDNEEDAPVMDWFYDHQPLRDNRKYVNGTTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSLEPLPEDDEEFELPEYVEPFLKDTPLYSDNTANGIALLWAPRPFNLRSGRTRR
AVDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWDTTEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFVVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDVATE
SAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
NQLPQHEYLKEMEPLGWVHTQPNESPQLSPQDVTTHAKVMADNPAWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYG
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggggtgtttccatacaggcctggggtacccccaatgcctggccccccaccagta
gcacccgattacatgtctgaagagaagttgcaggagaaagcccggaaatggcagcagcta
caggccaagcgttatgcagagaaaaggaaatttgggtttgtggatgctcagaaagaggac
atgcctccggaacatgttcgtaaaatcatccgtgaccatggagacatgaccaacagaaag
ttccggcatgataagagagtctatcttggagctttgaaatacatgcctcacgcagtgctg
aaattgctggaaaacatgcccatgccatgggagcagatcagagatgtgccagtgctgtat
cacattacaggagccatttcatttgtcaatgagattccttgggttattgagccggtctac
atatcacaatgggggtccatgtggattatgatgagaagagaaaagagggatagacggcac
ttcaaacgcatgaggtttcctccttttgatgatgaggaaccaccgctggattatgctgat
aacatcctcgatgtggagcccctggaagccatccaactagagctggacaatgaagaagat
gctcctgtcatggactggttctatgatcatcagccactaagggacaacagaaaatatgta
aatggtacaacataccagcgttggcagttcacccttccaatgatgtctacactgtaccgc
ctggccaatcaactgctcacagatctggtagatgataactacttctatctgtttgactta
aaagctttcttcacctccaaggcactaaatatggcgattcctggtggtcccaaatttgag
cctttggttcgagacattaacttgcaggatgaagactggaatgaattcaatgacatcaat
aaaatcattattcgccagccgatccgcacagaatacaagattgcattcccttacctgtac
aacaatctgcctcaccacgtgcatttgacatggtaccacacaccaaacgtggtattcatt
aaaacagaggatcctgaccttccagccttctactttgatcccctcattaacccaatttca
cacagacactctgtaaagagcctagaacctttaccggaggatgacgaagagtttgagctg
cctgaatatgttgagcctttcctcaaagatacacctctatattcagacaacacggccaat
ggcattgcattactttgggctccccgtcctttcaatctccggtctggtagaacacgccgg
gctgttgacatcccacttgtaaagaactggtatcgtgagcattgtcctgccggtcagcca
gtgaaggttagagtgtcttaccaaaaacttctgaaatattacgtcctcaatgctctcaag
cacaggccacccaaagcacagaagaagaggtatctcttccgttcattcaaagccacaaag
ttcttccagtccacgaaactagactgggtggaagtcggtcttcaggtgtgccggcagggc
tacaacatgttaaacctgttgatccacagaaaaaatctgaactatcttcatttggactac
aatttcaatttgaaacctgtgaaaaccctgaccacaaaggaacgtaagaagtctcggttt
ggcaacgctttccatttgtgccgagaagttctacgtctgaccaaacttgttgtggacagc
cacgtgcaatacaggttgggaaatgtggacgcattccagctgtcagatggtttgcagtac
atctttgcccatgttgggcagctcactggcatgtacagatacaagtataaactcatgaga
caaatccgaatgtgcaaagacttgaagcatctcatctactaccggtttaatacaggcccc
gttggaaaaggacctggttgtggcttttgggcagcaggctggagagtctggctgttcttc
atgcgtggtatcacccctttgctggaaagatggcttggaaatctgctcgccaggcaattt
gagggtcgacactctaaaggagtagcaaaaactgtgactaaacaaagagtggagtctcac
tttgatctggaactcagagcagctgtcatgcatgacatcctggacatgatgccagaaggc
atcaagcagaacaaggctaggaccattttgcagcacttgagtgaagcttggagatgctgg
aaggcaaacattccttggaaagtgccaggtctacctacacccattgagaatatgattctg
cgttatgtgaaggctaaagctgactggtggacaaatactgctcattacaacagagagcgc
attcgccggggtgcaactgtagacaaaacggtttgcaaaaagaatctgggaagattgaca
cgactttacctgaaagcagagcaagagaggcagcacaactacctgaaagacgggccgtac
attactgcagaagaggctgtagctgtgtacaccacaactgtccactggctggagagcagg
aggttttcccctattccatttcctcctctctcatacaagcatgataccaaactgctcatc
ctggccttggagaggctgaaagaggcatacagtgtgaagtcccgtctcaatcagtcccaa
agagaagaactgggcttaattgaacaagcgtatgacaatcctcatgaagccttgtctagg
atcaagcgtcacttgcttactcaaagagccttcaaggaggtgggaatcgaattcatggat
ctttacagtcacttggttccagtttatgatgtggagccccttgagaagatcacagatgct
tacctggatcagtacctctggtatgaagctgacaaaagacgtcttttccctccttggatc
aagcctgctgatacagagccacctccattgcttgtgtacaaatggtgccaaggcattaat
aacctgcaagatgtgtgggataccactgaaggagagtgcaatgtgatgctggaatcgcgg
tttgagaagatgtatgagaaaattgacttgacactgctgaatcgtctcctgcgtctgatt
gtggatcacaatattgctgattacatgactgcaaagaataacgtggtgatcaattacaaa
gacatgaatcacaccaactcctacggcataatccgtggtctgcaatttgcttcctttgtt
gtacaatactatggattggtgatggacctgttggttctgggattgcacagagccagtgag
atggctggtccacctcagatgccaaatgacttcctgagcttccaagacgtggccacagaa
tccgctcatcctatccgcttgtattgcagatacattgatcgcatccatatctttttccgg
ttttcagcagatgaggccagagatctcattcagagataccttactgagcatcctgatccc
aataatgagaacattgtgggctacaataacaagaaatgttggccacgagatgccaggatg
cgtcttatgaagcatgatgtcaatcttggtcgagctgttttctgggatatcaagaaccgt
ttgcctcgctctgtcacaactgtacaatgggaaaacagttttgtgtctgtgtacagcaaa
gacaatcctaacctgttgttcaacatgtgtggctttgaatgccgaattcttcccaagtgt
cgtacaagctatgaggaattcactcataaggatggggtctggaatttgcagaatgaggtg
accaaagaacggactgcccagtgtttcttgcgggtggatgatgaatctatgcagagattc
cacaacagagtgcgtcagattctcatggcttcaggttctacaacatttaccaagattgtg
aacaagtggaacaccgcattgattggtctgatgacttacttccgggaggccgtggtaaat
actcaggagctgctcgatcttttggtgaaatgtgagaacaaaattcaaaccagaattaag
attggtctgaactccaaaatgccaagtcggttcccacctgtggtcttctacactcccaag
gaacttggtggtttagggatgttgtctatgggacacgtgcttatcccacaatctgacctc
aggtggtcaaaacagacagatgttggaatcacccatttccgctctggtatgagtcatgaa
gaggatcagcttatccctaacttgtatcgctacatccagccatgggagagtgagtttatt
gattctcaaagagtttgggctgaatatgctctgaagagacaggaagccattgctcagaac
aggcggcttaccctggaggacttggaggattcatgggataggggtatcccacgtatcaac
acacttttccagaaggacaggcacactttggcttatgacaaaggctggagagtccgtacg
gatttcaaacaataccaggtattgaaacaaaatccattctggtggacacatcaaagacac
gatgggaaactctggaatctgaataactaccgcacagacatgatccaggcccttggagga
gtggaaggcatcctggaacatacattgtttaagggcacttacttcccgacttgggagggt
ctcttctgggaaaaagccagtggctttgaagagtcgatgaagtggaagaaactgaccaat
gcccagaggtctggtctgaatcagattcctaacagaagatttactttgtggtggtcaccc
acaatcaacagagccaatgtgtatgttggattccaggtgcaattggatttgactggcatt
ttcatgcatggcaaaattccaacgctaaagatctcgttgattcagatattcagggcccac
ttgtggcagaagatccatgaaagcattgtcatggatctgtgtcaggtatttgatcaagag
cttgatgccctggaaattgaaaccgttcagaaggaaaccatccaccccaggaagtcgtat
aagatgaattcatcatgtgcagatatcctgctctttgcttcctacaagtggaatgtgtct
cggccatctctgcttgccgattcaaaggatgtgatggacagcaccacaacacagaagtac
tggattgatatccagttgaggtggggagactatgactctcatgatattgagcgatatgct
cgtgccaagttcttggactacactacggataacatgagtatttacccatcacccactggt
gtcctgattgccatagacctggcctataacctccacagtgcctatggaaactggttccct
ggaggaaaacctctgatacagcaagctatggccaagatcatgaaagctaaccctgctttg
tatgtgctgcgtgagcgcatccgtaaaggactgcagttgtattcttcagagccaactgag
ccatatttgtcctcccagaactacggtgaactcttctccaatcaaatcatctggtttgtg
gatgataccaatgtgtacagagtaaccattcacaagacctttgaaggcaacttgacaacc
aaacctatcaatggagcaattttcatctttaacccaaggacaggccagcttttcctgaag
attattcacacatctgtgtgggcaggacagaagcgattgggtcagcttgccaagtggaaa
actgcagaagaagttgctgctttgatccgttcactacccgtagaggagcagcccaagcaa
attattgtcaccaggaagggcatgttggatcctcttgaggtacatttactggacttccct
aacattgtcatcaaaggatctgagctgcagttgcccttccaggcctgtctgaaagtggag
aagtttggagacctgatattgaaggccacagagccacaaatggttctcttcaatctctat
gatgattggctgaagacaatctcttcatacacggcattctctcggctcattttgatcctg
agagcactgcatgtgaataatgaccgtgcaaaggtgatcctaaagccagacaagactaca
attactgagcctcaccatatctggcccacactaactgatgaggaatggattaaggtagaa
gttcagctaaaggatctgatcttggcagactatggcaagaagaacaatgtaaatgtggcc
tctttaacgcagtctgaaatcagagatatcatattgggtatggaaatatctgccccatcg
cagcagaggcaacagattgcagagattgagaagcagacaaaagaacaatctcagctcact
gcaactcagacacgtacagtgaacaagcatggagatgaaatcatcacctccaccaccagc
aactatgagacccagaccttctcttctaagacagagtggcgtgtcagagcaatttctgct
gcaaaccttcaccttcgaaccaaccacatctatgtgtcatctgatgatatcaaggagact
ggttacacttacatcttgcccaagaacgtgttaaagaaattcatctgcatttctgacctg
cgagctcagattgctggctatctgtatggtgtgagcccgcctgataaccctcaagtgaag
gaaatccgctgcattgtgatggtgccacagtggggaactcaccagaccgttcacttgcca
aatcaactgcctcaacatgagtatctgaaggaaatggaaccattaggatgggtgcacaca
caaccaaatgagtctcctcagctgtcaccacaagatgtcaccactcatgctaaagtcatg
gcagacaatccagcttgggatggagagaaaactataattataacctgcagcttcactcct
ggatcctgcaccttgaccgcttacaagcttacacccagtggttatgagtggggaaggcag
aacactgataaagggaacaatcctaaaggctatctaccttctcattatgaaagagtgcag
atgctgctgtctgatcgtttccttggattcttcatggtaccaggtcaggcatcttggaac
tacaactttatgggcgtcagacatgatcccaacatgaagtatgaactacaacttgctaac
cccaaggaattttatcatgaggttcatcgcccgtcgcactttttgaacttcgccttgttg
caggaaggagaggtgtactctgctgaccgtgaagacctgtacggatag
DBGET
integrated database retrieval system
