Bufo bufo (common toad): 120994765
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Entry
120994765 CDS
T07950
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03030
DNA replication
bbuf03420
Nucleotide excision repair
bbuf03430
Mismatch repair
bbuf03440
Homologous recombination
bbuf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120994765 (RPA1)
03420 Nucleotide excision repair
120994765 (RPA1)
03430 Mismatch repair
120994765 (RPA1)
03440 Homologous recombination
120994765 (RPA1)
03460 Fanconi anemia pathway
120994765 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
120994765 (RPA1)
03032 DNA replication proteins [BR:
bbuf03032
]
120994765 (RPA1)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120994765 (RPA1)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120994765 (RPA1)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120994765 (RPA1)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120994765 (RPA1)
MMR (mismatch excision repair)
120994765 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120994765 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Por_Secre_tail
RADX
Motif
Other DBs
NCBI-GeneID:
120994765
NCBI-ProteinID:
XP_040279495
LinkDB
All DBs
Position
3:126484167..126570773
Genome browser
AA seq
607 aa
AA seq
DB search
MALPKLSEGAIAAILQGDTSCKPILQVINTRPINTANGPPRYRLLMSDGLNTLSSFMLAT
QLNSLVDENRLAANCICEVSRYIVNNLKDGRRVIIIMELDVLKSSDSVYGKIGNPQPYND
GQGAPQPAAVAPAPPPPSKPAQNSAPLLSMNKALSKPFGGGGAPNTPGGSQSKVVPIASL
NPYQSKWTIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNDQADKFFSLIE
VNKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETSVIPCDDSSDVPTVQFEFVPVSELEN
RNKDTLLDIIGVCKSFEDVTKVTIKSNNREVSKRTIHLMDTSGKVVSTTLWGEDADKFDG
SRQPIVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQVLEGSSISES
RGGMAGGNTNWKSLLEVKNDNLGHGEKADYFTSVATIVYLRKENCLYQACPSPDCNKKVI
DEHNGLFRCEKCNKDFPNFKYRLILSANIADFGENQWITCFQESAEAILGQNAAYLGELK
DKNEQAFEEVFQNANFRSYTFRIRVKLEMYNDESRIKATAMDVKPVDYKEYSRRLIMNIR
KLASQGA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccaaagctgagtgaaggggccatagcggctatcttacaaggcgatacctca
tgcaagcctattctgcaggtcattaatacacgtccaatcaacactgcgaatggtcctccg
cgctatcgactgctgatgagcgatggattgaacactctttcatcttttatgttggcaaca
cagctgaacagtcttgtggatgagaaccgccttgcagctaactgcatctgtgaggtctcg
cggtacattgtgaacaacttgaaagatggaaggagagtgattattataatggaattggat
gtgttgaagtcatcggattctgtctatggaaagattggaaatcctcaaccatacaatgat
gggcaaggagcgccccagcctgcagcagttgctccagctccaccacctcctagcaagcct
gcacaaaactctgctccacttttatccatgaacaaagcgctatctaaaccatttggagga
gggggtgcgccaaatacacctggtggctctcagagtaaagttgtgccaattgccagcctt
aacccttaccaatcaaagtggactatccgggcacgagtgaccaacaaaggccagatacgt
acatggagcaattcccgtggcgaagggaagttattttccattgagatggtggatgagagt
ggtgagatccgggctactgctttcaatgatcaagctgacaagtttttctctcttattgaa
gtcaataaggtgtattacttctcaaaaggcactttgaagattgctaacaagcagtatacc
gctgtaaagaatgactacgaaatgacgttcaatagcgagacctctgttatcccttgcgat
gactcttcagatgtccctacggtgcagtttgagtttgttcccgtttctgagcttgaaaac
aggaataaagacaccctattagatatcataggagtttgcaaaagttttgaagatgtcact
aaggtgacaataaaatcaaacaaccgtgaagtttcaaagagaacgatccacttaatggat
acatcgggcaaagtggtttccacaactctatggggtgaagatgcagataaatttgatggc
tccagacaacctattgtggcaatcaaaggagcgcggctttcagattttggggggagatcc
ctgtccgttttatcatccagcacagtcatgataaatccagatattcctgaagcattcaag
ctcagaggatggtttgactcggagggtcaagtacttgaaggatcctctatttcggagtct
cgcggaggtatggcaggaggaaacacaaactggaagtctttgctggaagttaagaatgat
aacctgggtcacggagaaaaagctgattattttaccagtgtggcaacaattgtctatctc
cggaaagagaactgcctgtatcaggcctgcccttctccggattgtaataaaaaggtgatt
gatgaacataatggacttttccgctgtgagaagtgcaacaaagattttcccaactttaaa
taccgtctcattctatccgcaaatattgcagattttggagagaatcagtggattacttgt
tttcaggagtcagctgaagccatccttggccagaatgctgcttatcttggagaactcaaa
gacaagaatgaacaagcttttgaggaggtatttcaaaatgccaacttccgatcttacacc
tttagaattcgagtcaaattggagatgtacaatgatgaatcccgcattaaagcaacagcc
atggatgtgaaaccagtggattacaaagaatactctagacgtcttatcatgaatatccgg
aaactggcctctcaaggagcctaa
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