Bufo bufo (common toad): 120994962
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Entry
120994962 CDS
T07950
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120994962 (DDX20)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120994962 (DDX20)
Spliceosome [BR:
bbuf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
120994962 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
120994962
NCBI-ProteinID:
XP_040279806
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All DBs
Position
3:193400057..193421741
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AA seq
771 aa
AA seq
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MAAHALGSRPRTGDVLQGPGEASDFSSLLLSRPVLEGLEAAGFTKPSPIQSKAIPLGRCG
LDLIVQAKSGTGKTCVFSTVALDSLILENIATQILVLAPTREIAVQIHSVIISIGICLEG
LECHVFIGGTPLPQDKVRLKKCHIAVGSPGRIKQLIEIGYLNTSSIRLFILDEADKLLEE
GSFQEQINWIYSSLPANKQMLAVSATYPESLAKALTKYMREPTFVRLNVTDPSLIGLKQY
YKVVNSHPLPHKTFEEKVQHLLELFCRVPFNQALVFSNLHSRAQHLSDVLTAKGFPAVCI
SGSMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPCDWETYMHRIGR
AGRFGTYGLSVSFCCRGEEENLMMSIAQKCNLQLLPLPEPIPDGLMDEACDWNVEIMSMK
NTSQTVMSEVKMHESSKMQNTGINALPELSSKNTKRTQPKQKKVAKKTTERENPQECLHM
ETSSLPKKPADNSKPKKTEGLGKEGKIQQGLDNSLPKIPSLSSFKHPVVCTSSFAELVED
YEQFIKEGLEKHVEIIRVYTGGHAERLSSENSIDMSSDAVNTPEQCNLSVDSSDESYSSS
SSLSDCEDSSEESRDSQEKPKAEERSSSCPDLPAERTEGAAMCPVNVDDFPEPPEDVQQA
SLVKANCSVGKGVIIDHSKKVRKRGKKVTQLSRRELCTEAQDDMYQLDYMNARAYPYGTT
SYADYWRSYYQAWQHYHSTASSPYYRNVYKCSNWMSAYHMHSLYLHEMLKP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccacgcgttgggttctcgacctcgcactggagacgttttgcagggccctggc
gaggctagtgacttcagttctctgctcctgtcccggcctgttcttgagggcctagaggca
gctggctttaccaaaccctctccaatacagagcaaggctataccgcttggaaggtgcggt
ttagatttaatcgttcaggctaaatccggcactggaaaaacttgtgtcttctccaccgtg
gcattagattctttgattctggaaaatattgcaacccagattttggtcttggctccaaca
agagaaattgcagttcaaatccattcagttattatatctatagggatttgcttggaaggg
ttggagtgccatgttttcataggagggactccgctgccacaagacaaagttcggctgaag
aagtgtcacatagctgtgggctcgcctggccgaataaagcaattaatagaaattggctat
ctcaacacatccagcattcgtctatttatccttgatgaagcagacaaactactagaagaa
ggaagcttccaggagcagattaactggatttactcctctcttcccgccaacaagcaaatg
ttagccgtttcagccacatacccagaatccctagctaaagcactgacaaagtatatgagg
gagccaacctttgtcaggttgaatgtaactgaccccagccttatagggttaaagcagtat
tacaaggtggtgaattctcatcctcttccacacaaaacttttgaagagaaggttcagcac
ttgcttgaattgttctgtcgagttccgttcaaccaagccttggtattttctaacttacat
agcagggctcaacacctctctgatgttctcacagccaaaggatttccagcagtgtgtata
tctggcagtatgaaccagagccaaagacttgatgctatggccaaactgaagcagtttcat
tgtcgtgtcctgatttccactgatctgacctcacgtggtattgatgctgagaaagtgaat
ttggttgtaaatctggatgtaccatgtgactgggagacatatatgcaccgaatcgggaga
gccggccgttttggtacctatggactttccgtctctttctgctgccggggagaagaagag
aatttgatgatgtcaatagctcagaagtgcaaccttcaactacttcctctacctgagcca
attccagatgggctaatggacgaagcttgtgactggaacgttgagatcatgtccatgaag
aacacatctcaaactgtcatgtctgaagtcaaaatgcatgaatcaagcaaaatgcaaaat
acaggcataaatgccttaccagaattaagcagcaaaaatactaaaagaactcaaccgaag
caaaagaaagttgccaaaaagactacagagagagaaaatccacaggaatgtctgcacatg
gagacgtctagcttgcctaagaaaccagctgataacagtaaacctaaaaagacagaaggc
ttggggaaggagggtaaaatccagcaggggctggataattcccttcctaaaatcccaagt
ttatcttctttcaaacatcccgtggtgtgcacatcatcctttgccgagctcgtcgaagat
tatgaacagtttatcaaggaaggcttagagaaacacgtggaaatcatccgcgtttacaca
ggaggtcacgcagagagactctcttctgaaaactcgatagacatgtcttcagatgctgta
aacaccccagagcaatgtaacctaagtgtggactccagtgatgaaagttatagctcatcc
agctccttatcggattgtgaggacagtagtgaggaatccagagattcgcaggagaaaccg
aaggccgaggaacggtcaagttcctgtccagatcttcctgctgaaaggacagaaggggct
gcaatgtgcccggtgaatgtggatgactttccagaacctccagaagacgtgcagcaggca
agcctggtcaaagcaaactgttctgttggtaaaggtgtaattatcgatcattccaaaaag
gttcggaaacggggtaaaaaagtaacccagctgtccagaagagaactgtgtacggaagct
caggatgacatgtaccagctggactatatgaatgccagggcatatccttatggtaccacg
agttacgctgactactggcgatcatattatcaagcatggcagcactaccattccactgcc
tcaagcccttattacagaaacgtttacaaatgctccaactggatgtccgcctaccacatg
cactccttgtacctccacgagatgctgaagccttga
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