Bufo bufo (common toad): 120995044
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Entry
120995044 CDS
T07950
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
120995044 (SOX13)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120995044 (SOX13)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120995044
NCBI-ProteinID:
XP_040279942
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Position
3:complement(225895633..225952249)
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AA seq
575 aa
AA seq
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MDSSVKQDALKCYSGNLQEQSVALKMPTSPAEFCPKMEEDSKDEIFKHVTTLQQDSSLRE
ASYITDSWSIAPLANGLSPEVSKTINDAMPALEKLLTSEWKEKLLGNGALHSKDVKGTHE
SLAEKELQLLLMIRQLAGLRDQLLSAHSEHRNMAAMLLEKQQQQMELARQQQEQIAKQQQ
QLIQQQHKINMLQQQIQQVNMPYVMIPAFPSAQAVPTDSQISPLMQQISCKPVDYPMSLI
HNPTPPRASTTGKQEPSQPLNLTARPKSSEQSPTSSSSPTLKPSPAPNNGVGSCIDNTSS
PARSNLPLGFLGEGDAITKAIQEARQLLHGQNKTPEQRDGHSVKDVFESVTQRELHDESS
LQESEDSLLRCGMDIDGSRHFSESRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSIS
KILGSRWKSMSNSEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKA
LMKNRRQDSRHGYALPSQGSVASPPSPSGFQSLTGMSHLPTSDIYQAQDGNLPVILNTRS
LQNQDPRGPVPRMPDVCSDSEDSIKSEGELVVITD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcagtaaagcaggatgctctaaaatgctattctggaaacctccaagagcaa
agtgttgctttgaagatgcctacctctccagcagaattctgccccaagatggaggaagat
tctaaagatgaaatctttaaacatgtgaccactttacaacaggattcatctcttcgggaa
gcctcatatatcactgattcttggagtattgcacctctggctaatggactaagtcctgaa
gtgagcaaaacaataaatgatgcaatgccagccctagagaaactgctcactagtgagtgg
aaagagaaactactgggaaatggagcacttcacagtaaagatgtgaaaggcactcatgag
agcctggcagagaaggagctgcagttgttgctgatgatccgtcagctggcgggactgagg
gaccagttgcttagtgcacactctgaacataggaacatggcggcaatgttgttggagaag
caacagcagcagatggagcttgcaagacaacaacaggagcagatcgctaaacagcagcag
cagctcatccagcagcagcacaaaatcaatatgttacagcagcagatccagcaagtaaac
atgccatatgtcatgattccagcattcccttctgctcaggcagttcctacagattctcag
atttcacctcttatgcaacaaatttcttgcaagcctgttgactatcccatgtcgctgatt
cataatcccactccaccaagagcctctactactggaaaacaggaaccatctcagcctttg
aatctgacagccagacccaaatcttctgagcagtctccaacatcaagtagctctccaact
ttgaaaccttcaccagcaccaaacaatggtgttggaagttgcatagataatacatccagc
cccgcaagatccaatctaccacttggtttccttggtgaaggagatgccattactaaagca
atacaagaagcaaggcagcttcttcatggacagaacaaaacaccagagcagcgtgatggc
cacagtgttaaggacgtgtttgaatcagtaactcaaagggaacttcatgacgagtcttct
ttgcaagaaagtgaagactctttgctgcgatgcggcatggacattgatggatctcgccac
ttctctgagagccgtggcagccatattaagaggccgatgaatgcttttatggtatgggca
aaggatgaacggagaaagatcttgcaagcattcccagacatgcacaattccagcatcagc
aaaattcttggctctcgctggaagtctatgagtaattctgaaaagcagccatactacgaa
gaacaggcacggctgagccgacagcacttggagaagtatcctgactacaaatacaagcca
cgaccaaaacgtacctgcattgtagagggaaagaggctgagagtgggagaatacaaagct
ctgatgaagaaccggagacaagactcgcggcatggatatgctctcccatcccaagggtcg
gtggcaagtcctccatcaccatctggattccaatctctgacaggaatgtctcatctgccc
acttctgatatttaccaagcccaggatggcaatttgccagtaatcctcaacaccagaagt
cttcaaaatcaggatcccagagggcctgtgccacgtatgcctgatgtctgcagtgactct
gaagactctatcaagagtgaaggagagcttgtagttataacagattaa
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