Bufo bufo (common toad): 120995205
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Entry
120995205 CDS
T07950
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120995205 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
120995205 (ARID1A)
03021 Transcription machinery [BR:
bbuf03021
]
120995205 (ARID1A)
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120995205 (ARID1A)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
Helix-turn-helix
ARID
120995205 (ARID1A)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120995205 (ARID1A)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120995205 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
120995205
NCBI-ProteinID:
XP_040280186
LinkDB
All DBs
Position
3:310557513..310603109
Genome browser
AA seq
2050 aa
AA seq
DB search
MAAQVAPASGPSLGGTPPAAGPELKKSPGDPPPSAEPQTEAPAQASTDPDTPEAANGTRA
ASTSSLQEPGDAPAASSASSHPPGGFGFSSFSRGVFQSGPGLDYPPPTEAYNSYPAYPNR
AYQPGYPPPRPTASTGKPPAPAYPPPPRFGPAQPAAATPTLNQLLTAPSPGRGYPAYPGG
DYSEQHKGPEGYGAGWAAGQRVVHPPGSPGSSGQSLPRTSQPGSPMDQMGKMRPQPYGSS
NPYSQQPGSQQGHSGYPVQPYTSQTPQRYPMAMQGRPQGAMSMQYGQQMTSYAQQGPGSY
SQQSQSPYYNQQSLHPPQQQTTPPQNQYSQQQSAPQSYTQQQPSSSQPPSGQPVQPTFPQ
QQQSPSPSPYTQQQQAPPTSSQSQSPYTQQAPQYPTSQQQGSSYSTSGAQQGSTYSQQRF
PPPQELSQDSFTSQASSTPSLGSSKGQEDLSLGMQPRPSSLPDLSGSIDDLPMGAEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAPTRSGPLSPTS
VPGTQMPPRPPSGQSDGLIHPTMNQAGLGQERGYMQRNTQIPQYGSPQPGQALSPRQSSG
GQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNTMANAGYTGGGMAPLVAGGQMH
GQGGMPQYAGRMAHSAMGNRPYGPNMGTMPPQVGSGMCPPPGMNRKAQEAAGMHGTANSI
QNRSPGYPNMNQAGMMGAGTPYGQGMNSMAAMMNAQGPPYMGGNMANNSVSLTGMAGSPE
LMGLSDVKLTPTPKMNNKADGTPKAETKSKKSSSSTTTNEKITKLYELGVEPERKMWVDR
YLSFTEEKAMGMTNLPAVGRKPLDLYRLYMSVKDIGGLTQVNKNKKWRELATNLNVGTSS
SAASSLKKQYIQCLYAFECKIERGEDPPPDIFASAEAKKQAKLQPPSPAGSGSMQGPQTP
QSTSSSMAEGGDLKPPTPASTPHSQMPPMPGMRNNSVGLQDAYDGSDPSYQKRNSMTPNP
GYQSDMMGRMPYDASKDPYGGMRKGADPFMSSGQGPSGTMGDPYSRATGPGMPNMAQRQH
YSYGGYDRVRPEPGLGPEGSMGSAGTQPNMMPSNTDSGMYSPGRYPQQRHESYSNQYPTQ
GTSGSPYQGQQNPMYQQQNYKRPMDGSYGPSSKRHEGEIYSAPYTGPQSGQGQQTQPQQQ
QTPGSGVQPPPGQPSPAPSSQPTQDPYGQYGSGYPQSAGERRPAPTGQNQFPFQFGRERV
SSTPGNNTQPPLPPSGMGGSTEGTQPAAMWPSRGDMGYNYQGRPGPPPASTQGPSYHSGP
PRGDDMVHSDQRLSHEGQWPPHVNRQQPPFVPAPGPPMSRAPPQSGFQASSSMPNHLPQV
ASPATPRPLEAHTSPSKSPFLKMQKAGPPVPASHIVPTPTQPPLIRRDITFPPGSVEATQ
PILKPRRRLTAKEIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLP
GILELLVEYFRRCLIEIFGILREYEVGEPAQKTLLNPSTHGSHRPIFGEAESSDEDCQPL
TDGDTQSEDEGEEERKAYSTPCNSSEDTQRHSSKFDKLPVKIVQREDAFVLDCSHQLGRR
QEFDSGLLHWRIGGGDTTEHIQTHFERRPDPPVRKRPQTKRRSKEQHVPVAEDTTATIDD
VLCSRSSSLPPDSGEISEEDSEFQLGGSPSPRNRHGLKILEDEPRSKDETPLCTLEDWQD
ALSRRCVCISNILRSLSFVPGNDLEMSKHPGLLLLLGKLVLLHHKHPERKQAPLTYEKEE
DRDQGVSSNKAEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCP
SAEAQDPFLTLGPNAVLSPQRLVLEALSKLSIQDSNVDLILATPPFSRLEKLYGTLVRFL
SDRKNHVCREMAVVLLANLAQGDSLAARAIAHQKGSIGNLLGFLEDSLAATQFQQSQAAH
LHGPSAPFEPTSTDMMRRASRALLALAKVEENHSEFTLYEARLLDISVSPLMNCSVSQVI
CDVLFLIGQS
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcaccggcctccggccccagccttggaggaaccccgcccgccgcc
ggtcccgaattaaagaagagccccggggacccccctccttctgccgagcctcagactgag
gcaccggctcaggcctccacggaccccgacacgcctgaagcagccaacgggacccgagcg
gcatcgacctcttcgcttcaggaaccaggagatgcgcctgcggcctcctccgcctcatcg
cacccgcccgggggattcggtttctcctccttcagccggggagtcttccagtcgggcccc
ggcctggactatccgcctcctaccgaggcctacaactcttatccggcctacccgaatcgg
gcctaccagccgggttaccccccgcctcgcccgactgcttccacgggcaaacccccggct
ccggcctatcctcctccgccgcgattcggccccgcgcagccagcagctgctacaccgacc
ctgaaccagctcctgacggcgcccagtccagggcgggggtacccggcctaccccggagga
gactactcggagcagcacaaaggacccgaaggctatggagccggctgggccgcaggtcaa
agagtggtgcacccgcccgggagccccggcagcagtgggcagagtctgcccaggacgtcg
cagcctggcagtcccatggatcaaatgggaaagatgagaccccaaccatatggctcaagc
aacccttacagccaacagcctggttctcagcaagggcattctggttacccagtacagcct
tatacttcacaaacgccgcagagataccccatggccatgcagggtcgacctcaaggagct
atgagtatgcagtatggacaacagatgacttcatatgcgcaacaaggccctggatcctat
tctcagcagagccagtcaccatactataaccagcagagcctccaccctccacagcagcaa
acaacaccaccacaaaaccagtattctcagcaacagtcagctccccagtcttacactcag
caacagccttcctcttctcagcctccctctggccagcctgtgcagcccaccttcccccag
cagcagcagtcaccatctccatcaccatatacacaacagcagcaggcccccccaacaagt
tcacaaagccagtcaccatacacgcaacaagctcctcagtatccaacctcacagcaacaa
ggctcatcctattccacctctggagcacagcaggggagtacctactctcagcaacgcttc
cctccaccacaggagctctctcaggattcctttacttcccaggcctcatccaccccttct
ctgggttccagcaaaggacaggaggatctcagcttggggatgcaaccacgaccctctagc
cttccagatctttctggttcaattgatgatctcccaatgggtgctgagggtgctctaagt
ccaggtgtcagcacttctgggatctccagcagtcagggcgaacagagtaatccagctcag
tcacctttctcccctcatacatcaccccacttgcctggaatccgagggccttccccatct
cctgttggctctccagccagcgtagctcccactcgttctggtcccctgtccccaacatct
gtaccaggaacacagatgccaccacgtcctcctagtggacaatcagatggcttaattcac
cctaccatgaaccaggctggtcttgggcaagagagagggtacatgcagaggaatactcag
atacctcagtatggatctccgcagcctggtcaagcactttctccacgccagtcatctggg
ggccagatgcatgccggaatgggaccctatcagcagaactctatgggtagctatggacct
cagggaggacaatatggaccccaaggggggtaccccaggcagccgaattataatactatg
gcaaatgcaggatatacagggggtggcatggctcctcttgttgcaggtggtcagatgcat
ggtcaaggaggcatgccgcaatatgcaggacgtatggcccattcggcaatgggaaatcgg
ccatatggtccaaatatggggaccatgccaccacaagttggaagtgggatgtgtccacct
cctggtatgaatcgtaaagcacaagaggctgctggaatgcatggcactgccaactcaata
cagaacaggtcacctggttaccctaacatgaatcaagctgggatgatgggagctggaacc
ccatatggtcaaggaatgaacagtatggccgctatgatgaatgcacagggacctccctat
atgggaggcaacatggccaacaactcagtctctttgacaggcatggctgggagtccagaa
ctcatgggactctcggacgttaaattgaccccgactcccaagatgaataataaagcagat
ggaacacctaaagcagagaccaaatcaaagaaatccagctcctctaccactacaaatgag
aaaataacaaaactgtatgaattaggggttgaaccagagaggaaaatgtgggtggatcgc
tacctgtcattcacagaagagaaggcaatgggcatgactaatctacctgctgttggcaga
aagcccttagacttgtaccgtctctacatgtctgtcaaggatattggtggactcacccag
gttaataagaacaagaagtggagggagctcgctacaaacctgaatgtgggcacatcaagc
agcgcagctagctctctaaagaaacaatacatacagtgtctgtatgcatttgagtgcaaa
attgaaaggggagaagacccaccacctgatatttttgcatctgctgaagcaaagaagcag
gcgaaactccaaccaccatcaccggctggctcaggctccatgcagggaccgcagactcca
cagtccacaagtagctccatggccgaaggaggggacctcaaaccccccacaccagcatcc
accccacacagtcagatgcctcccatgccaggcatgaggaataactcggtggggctccag
gatgcatatgacggttcagatccttcttaccagaaacgaaactccatgactcctaatcct
gggtaccaatcagacatgatgggcagaatgccttatgatgctagcaaggatccttatggt
ggtatgaggaaaggtgctgatcctttcatgtcttcaggtcagggacccagtgggacaatg
ggagacccttatagtagggctacaggcccaggtatgccaaatatggcccagcgtcagcac
tattcttatggtggttacgacagagtgaggccggaacctggtcttggtccggaaggaagc
atgggaagtgctggcactcagccaaatatgatgccttccaacacagatagtggcatgtac
tcaccagggcgctatccacaacaaaggcatgaatcctacagcaatcagtaccccacacaa
ggtacatcaggtagtccctatcaaggtcaacagaacccaatgtatcaacaacagaactac
aagcgtccaatggatggtagttatggcccatcttctaaacgccatgaaggggaaatatac
agtgctccttatactgggccacagagtggacaaggtcaacaaacgcaacctcaacagcaa
cagacacctgggtcaggagtgcaacctcctcctggtcagccttctccagctccaagttca
cagcctactcaagacccttatggccaatatgggagtggttatccacaaagtgctggggaa
cgcaggcctgcacccacagggcaaaatcagtttccttttcagtttgggcgtgaaagggtg
tcatccactccagggaacaacacacagccacctctgccacctagtggaatgggagggtct
acagaaggaacccaacctgcagccatgtggccaagtcggggagatatgggctacaattat
caggggaggcctggtcctcctccagcgagcacacaaggacctagttatcattctgggcca
cctcgtggagatgatatggtgcattcagatcagcgacttagccacgagggccagtggcca
cctcatgttaacaggcagcagcccccctttgtgcctgcccctggtccacctatgagcaga
gctccaccacagtctggatttcaagcctcctcaagcatgcctaaccatctgcctcaggta
gctagcccagccacccctcggccactggaagcccacacctcacccagcaagtccccattc
ctgaagatgcagaaagctggaccccctgtgcctgcatcacatattgtgcccaccccaacc
cagccacctctcattcgcagggatataactttccctccaggttcggtggaagccacacag
cctatactgaagccacggagacgcctaactgcaaaggagatagggactcctgaggcttgg
cgtgtgatgatgtcattgaaatctggcctccttgctgaaagtacctgggcactggacacc
attaacattcttctttatgatgacaacagtatcatgacatttaacctcagtcagctgcct
gggatactagagttgctggtggaatatttccgacgatgcctgattgaaatctttgggata
ctccgagagtatgaagttggagaacccgcacaaaagaccctacttaatccttccactcat
ggctctcacaggccaatttttggtgaagcagagtccagtgatgaggactgccaaccattg
acagatggcgacacccaaagtgaggatgagggagaagaagaaaggaaggcctattcaaca
ccctgtaattcaagtgaagatactcagcggcatagcagcaagtttgacaaacttcctgta
aagatagttcagcgggaagatgcctttgtgttggactgctcgcaccagttgggtcgtcgg
caagaatttgatagtggcctcttacactggcgaataggaggaggtgacacaactgagcac
atccagactcattttgaaaggcgccctgatcctcctgttcgtaaacgtccccaaacaaag
cgtcgttcaaaggagcagcatgttcctgttgcagaggatacaactgccaccatagatgat
gtcttgtgttcccggtccagttctttgcctccagattcaggcgaaatctctgaagaggac
tctgaatttcagttaggtggtagtccttcaccacgcaaccgacatggtcttaaaattctt
gaggatgaaccacgcagcaaagatgaaacccccctgtgcacactggaagattggcaagat
gctctctctcgccgttgtgtgtgcatatcaaatatcttgcgtagcttgtcttttgtgcca
ggcaatgacttggaaatgtcaaagcacccaggactgttacttctccttgggaaacttgtg
ctgctccatcacaagcacccagaaaggaagcaagcacccctcacctatgagaaagaggag
gacagagaccaaggagttagtagcaataaagctgaatggtggtgggactgtctggaaatg
ttgcgtgagaacacactggtcactcttgctaatatatctggtcagcttgatctttccccg
taccctgaaagcatttgtttgcccatccttgatggtctgctacactgggcagtgtgtcca
tcagctgaggctcaggatccatttttaacgttgggtcccaatgcagtactttctccccag
agactggtgttggaggcccttagcaaactaagcattcaagatagcaatgtggacctaata
cttgccaccccacctttcagtcgtctcgaaaagctgtatgggacattggtgaggttccta
agtgacagaaaaaaccatgtgtgcagggaaatggcagtggtgcttctagcaaacttggca
cagggcgatagtttagcggccagggctattgcccatcaaaaaggcagcattggtaacctg
ctaggttttcttgaggatagtctggcagccactcaattccagcagagtcaggctgcccac
ttacatggaccctctgctccctttgaacccacaagtacggacatgatgcgacgggcctca
cgtgccctgcttgctttggcaaaagttgaggagaatcattcggagttcacactgtatgag
gcccgtctgctggacatctcagtgtctccactaatgaactgctccgtgtcacaggtcatc
tgcgatgttctcttcttgattggccagtcatga
DBGET
integrated database retrieval system
