Bufo bufo (common toad): 120995439
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Entry
120995439 CDS
T07950
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
5.6.2.6
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
120995439 (DHX40)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120995439 (DHX40)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
120995439 (DHX40)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
AAA_22
HA2_N
T2SSE
AAA_19
HA2_C
AAA_16
SLFN-g3_helicase
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
120995439
NCBI-ProteinID:
XP_040280595
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Position
3:372855567..372968356
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AA seq
776 aa
AA seq
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MTSGGPQRRRKKTSRAARTSGWEHCKLGAMQSKSRAYETDGERQYYLPILPIHKCKDKLL
QTAREHPFFVVTGETGSGKTTQLPQYLYKAGFGKHGIIGVTQPRRVATISVAQRVAEEMD
CSLGSTVGYQVRFDDYTSQKTAIMYMTDGCLLRHTLTDPNLTKFSTVVLDEAHERSLSTD
ILFGLLNKQFLMKCTSKRKYPLKVIVMSATLDIERLSEFFGSCPVCVIPGKVFPIKERFH
NLIGPRDKDNSAYVTETVKVTLQTHLNELAGDILVFLTGQSEIEKACDVLYNKAEMIDYR
HDVFDSSVEGLLILPLYGSMPTDQQKRIFLPPPKGIRKCVVATNIAATSVTIEGIRYVID
SGFVKQLNHNPRAGLDVLEIVPISKSEAVQRAGRAGRTASGKCHRIYSEEFWEKCMPDHM
IPEIKRTSLTSVILTLKCLEVNDVIRFPYLDPPEEKFILEALRKLYQCSAIDRSGNVTDL
GRFIIEFPLSPNLACALIKATSLGCEDLLLPAAAMLSVEHVLIQSGITQKQKEVEISHKT
LSEMAGGDNDFATLISIFEECKSSDNPVLWCRKHAVHWRAVKSAFSVEKQLKDITDRLKQ
LKHFPVEKSDIPKNELLQRCLCAGFFSNVARRSVGRTFCTMDGNGSMVHIHPSSALFGQE
ASLEWILFHNVMVTSKIYVRTVCPIRYEWVKDLLPKLHDVDAYELSSVAREEVTEEELAK
WESREQAKRNNEGLEASLKKMQKRNDDKSISDAKERFLQRKQQKLQNPNAHKGEAS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgactagtggtggtcctcaaagaagaagaaagaagacaagccgggctgcgcgaacaagt
ggatgggaacattgtaaactaggtgcaatgcagtccaaatccagagcttatgaaacggat
ggtgaaaggcagtattacctaccgattcttcctattcacaaatgcaaagataagcttctt
cagactgcaagagagcatccgttttttgttgtgacgggagagactggaagtgggaagact
actcagcttccccagtatctctacaaagcaggttttggtaaacatggaattattggtgtc
acccagcctcgccgagtagcaacaatttctgtggcacaaagagtcgcagaggaaatggat
tgttcgttggggagtacagtaggttaccaagtgcgttttgatgactacacttcacagaaa
actgcaatcatgtacatgactgatggatgtctgctgagacacacactgaccgatcccaac
ctcaccaaattcagcacagttgttttggatgaagctcatgagcggagtttaagtactgat
attttatttggtcttttgaataaacagttcctgatgaaatgtacctcaaaaaggaaatac
cctctcaaagttatagtaatgtctgccactttggacattgagagactgtctgaattcttt
ggcagttgtccagtatgcgttattccaggaaaggtcttcccaattaaagagagattccat
aacctcattggccccagagacaaagacaacagtgcttatgttacagagactgtgaaagtg
acactacagacacacttaaatgagctggctggggatattcttgtttttctcacaggccag
tcagaaattgagaaggcatgtgatgtgctgtacaataaagctgaaatgatagactacagg
catgatgtctttgactcttctgtggaaggacttcttatcttgccattgtatggttccatg
ccaacagatcagcaaaaaagaatttttctcccacctccaaaaggcatcaggaagtgtgta
gtagccacaaacattgctgccacgtctgtgacaattgaaggcattaggtatgtcatagac
agcggctttgtgaaacagttaaaccataatcccagagctggtctagatgttttagaaatt
gtgcctatttcaaaaagcgaagcggtgcagagagctggcagggctggcaggacagcttct
gggaaatgccatcgtatttacagtgaggagttctgggagaaatgtatgccagatcacatg
atccctgagattaagcgaaccagccttacatctgtcatcctgacccttaaatgcctggag
gtaaatgatgtcatcaggttcccctacttggatccacctgaagaaaagtttattttagag
gcactcaggaagctctaccagtgcagtgcaattgacaggagcggcaatgttacagatctt
gggcgattcatcattgaatttccattatcgcctaatctggcctgtgctcttattaaagca
acctctcttggatgtgaggatcttcttcttcctgcggcagccatgttgtctgttgaacat
gtgcttatacaatcagggataactcagaaacaaaaggaagttgaaataagtcacaaaaca
ttatcagaaatggctggaggagacaatgactttgctactcttatttccatttttgaagag
tgcaagtctagtgacaatcctgttttgtggtgtcgtaaacatgctgttcattggagagct
gtaaaatctgctttcagtgtggaaaagcagcttaaagatattacagataggctcaaacag
ctgaaacattttccagtggaaaagagtgatatacccaagaatgagttgcttcagcggtgt
ctgtgtgctggatttttttccaatgtggcaagaaggtcagtaggaaggacattctgcaca
atggatggaaatggcagcatggtgcatatccatccttcctcagctttgtttggacaggag
gccagtctggagtggattttattccacaacgttatggttacatcgaagatatatgtccga
actgtgtgtcccatccgctatgaatgggttaaggatttgcttccaaaacttcatgatgta
gatgcctatgaactgagcagtgtggccagagaagaagtgaccgaagaggaacttgccaaa
tgggaatcaagagaacaagcaaaacgcaacaatgagggactagaagcctcactaaagaaa
atgcagaaaagaaatgacgacaagtccatatctgatgccaaagaacgtttccttcaacgc
aaacaacagaaacttcagaatccaaatgctcataagggagaagcaagctga
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