Bufo bufo (common toad): 120995663
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Entry
120995663 CDS
T07950
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120995663 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
120995663 (TGFBRAP1)
Membrane trafficking [BR:
bbuf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120995663 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
zf-RING_UBOX
TPR_Vps41
zf-RING_16
Phosphoesterase
Motif
Other DBs
NCBI-GeneID:
120995663
NCBI-ProteinID:
XP_040280948
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Position
3:434331746..434376539
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AA seq
869 aa
AA seq
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MSVQAFRLVCASEKEHLPPGIQIECLECCGHDLYVGTNDGCIHHLLLVEENNTQVTGLAL
VQPSDHSSFTTTRQHSRQLGLKKPVCELRAASALGRLLVLCDNTITLLSSDSLEPVAGTK
IRGVLSFTLNENPVSGDPFSVEVCLISSKKRTVQIFSVGQERVQLVREVTTPEQPCALAA
DGHFLCLALSSRYVTLNYNTGHCQDLFPYPSEQKRPIIKRISRQEFLLAGPGGLGMFATV
AGISQRAPVHWSENVIGAAVSFPYVLALDEEFVTVHSMLDQQQKQSLPLKEGIILQDFEG
RVIVATSNGVYVLIPLPLEKQIQDLLSNQRVEEALVLAKGARHNIPKEKFQVMYRRILQQ
AGFIQFAQLQFLEAKELFRSSHLDIRELISLYPLLLPSSSSFIRAHPPLHEYADLNQLTR
GDQEKVGKCKRFLMSYLSEIRSTEVANGYQEDVDTALLKLYAEADHESLLDLLVSDNSCA
VSDSAAWLEKHKKYFALGLLYHYNKQDAAAVQVWVRIVDGEVEDHTRPDLFEYIVDFLTF
SKDQLLVWQYADWVLQKSEQVGVQIFTKRSLEEQLQNGFCPDKIVDHLCKYRKALLIYLE
HLVKEKNIQKEKYHTHLAVLYLEEILRLKSVESSDPTELEDLRQRFQKLLQQSDLYRVLL
LIDKIKGTDMHMERAILHGKLEEHDQALNILVLHLKDFAAAESYCMWNSQGRDASYRKRL
FLLLLSSYLTPSTPDNSLTVAAVDLLNNHPTEFDASSVLRLLPENWSVQLLSPFLAGAMR
EHVHALRTSQIALGLAKAENIIYKKEKLNMRDKPVILSEKKFCHVCRKPFQEPVFVRSPN
GHIVHTHCAASQRVNSSIDGHMSKPSKRT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcaagcgttccgactggtgtgcgcttccgagaaggagcatcttcccccaggg
atacagattgagtgtttggagtgctgtggacatgacctgtatgttggcactaatgacggc
tgcattcaccatctcctgctagtagaagaaaacaacacacaggtgactggcctcgccttg
gttcagccgtctgatcacagtagcttcacaaccacccgacaacattctagacagttgggt
ttaaagaagccagtatgtgaactgagagcggcctcggccctggggcggttactagtgctg
tgtgacaacaccattactttgctgagcagtgactctcttgagccagttgcaggaactaag
atccggggggtgctcagcttcaccctcaatgagaatccggtgagtggcgaccccttcagt
gtggaggtttgtctgatctcttctaagaaacgcactgtacagatcttcagtgtgggtcag
gagcgggtacagctagtgcgggaagtcaccacaccagagcagccctgtgcactagcagca
gatggacattttctgtgcctggccctcagcagccgctatgttaccctgaactataatact
ggacattgccaggaccttttcccctatcctagtgagcagaagaggccgatcataaagagg
atcagcagacaggagtttcttctggctggacccggaggtttagggatgtttgccacagta
gcaggaatctctcagcgtgcacccgttcattggtcagaaaatgtgattggcgcagcagta
tcttttccctatgtgttggctttggatgaagagtttgtcacagtgcacagcatgctggat
cagcagcagaagcaaagcctgccgctcaaggaaggtatcattctgcaggacttcgaaggt
agggtaatagtagcaaccagtaacggggtgtatgttttaatacccttgcctttggaaaag
cagatacaagaccttttatcaaaccagagagtcgaagaagctcttgtacttgccaaaggt
gcacggcataatattccaaaggagaaatttcaggttatgtatagaagaatcctgcaacag
gctgggtttatacagtttgctcagcttcagtttttagaagcaaaagaattattcagaagc
agtcatctcgatatccgggaactcatctctctctaccccctcctccttccatcttcctct
tcatttatccgtgcgcaccctccgctacatgaatatgctgatctcaatcagctgacacga
ggcgaccaggaaaaagttggaaagtgcaaacgttttctcatgtcctacttaagtgaaatc
cgcagcacagaagtggcaaatgggtaccaggaagatgtagatactgccttgctaaaactt
tatgctgaagcagatcatgagagcctcttggatctactggtctccgataattcctgtgcg
gtgtcagacagcgcagcctggttggagaagcacaaaaaatattttgcacttggtttactg
tatcactacaacaagcaagatgctgctgccgtgcaggtttgggtaagaattgtggatggt
gaggttgaagaccacactcggccagacctctttgagtatatagtggacttcctgacgttc
tccaaagaccagctactggtgtggcaatatgcagactgggttttgcagaaaagtgagcag
gttggagttcagatctttacgaaacggtcattagaggaacagttgcaaaatggcttctgt
ccagataagattgtcgatcatctctgcaagtaccgcaaggctttacttatctacctggaa
catttagtcaaagaaaagaacattcagaaagaaaaataccacacacacctagctgtgctg
tatcttgaagaaatcctgcgtctgaagtctgtggagtcttcagacccgactgagctagaa
gatctgcgtcaaaggtttcagaaactgttacagcagtcagatttgtatcgggttctcttg
ctgatcgataaaatcaaaggcaccgatatgcacatggagcgggcaatattacatgggaag
ctggaggaacacgaccaggctttaaatatcttagttcttcatttgaaagactttgctgca
gctgagagctattgtatgtggaactcacaaggcagggatgcttcttatcgcaaaagactc
ttcctgctcctcctttcctcctacctcacaccatccacgcctgacaattcactgaccgtg
gccgccgtagacttgttaaataaccaccctacagagtttgatgcatccagtgtgttgcgt
ctattaccagaaaactggtcagtgcagcttctttccccatttctagctggggccatgagg
gagcatgttcatgcattaagaacgtcccagatagcactaggactggcaaaagcggagaat
ataatttataagaaagagaagctcaatatgagggataagccagtaattctttcagaaaag
aaattttgccatgtgtgccggaagccattccaagaaccggtgtttgtcagaagtcccaat
gggcatattgtccatacccactgtgctgcaagccagcgtgttaacagcagcattgacggc
catatgtccaagcctagtaaacgaacttga
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