Bufo bufo (common toad): 120995795
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Entry
120995795 CDS
T07950
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120995795 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120995795 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120995795 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbuf04147
]
120995795 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
bbuf00536
]
120995795 (COL4A2)
Exosome [BR:
bbuf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120995795 (COL4A2)
Glycosaminoglycan binding proteins [BR:
bbuf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120995795 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120995795
NCBI-ProteinID:
XP_040281161
LinkDB
All DBs
Position
3:complement(466819003..467113341)
Genome browser
AA seq
1731 aa
AA seq
DB search
MALSGGLTQCHRNHQQWKNSLSWIFLALMLAGLLSKTVDAGGKSYTGPCGGRDCSEGCQC
YPEKGSRGQPGPLGNQGVSGPPGLIGIEGLPGRKGDKGERGHPGVTGPLGDKGQSGVTGF
PGANGVPGHVGQGGPRGKPGLDGCNGTTGDAGETGPSGPSGSAGYSGEQGFKGQKGEPFY
ISADLKNKIRGDPGELGIIGVPGPRGSPGVMGFIGPMGQPGYPGPPGPQGPQGPQGSKGL
GFYGQKGEQGEQGSPGPPGLPCQITGEPGDIGPTSAPCHEELVEPSDISLIDYLGETGEK
GEKGNPGLKGQRAFYGEKGEEGVMGFPGARGFSGSDGQPGDPGNDGLPGISGFPGTPGFR
GIKGERGGIGAPGPITYATHPETQKGSKGDVGFPGNAGPDGERGDIGDTGLPGLMGRPSP
FPGQPGYPGLKGERGHKGYQGVPGFPDFQPGIDGEPGQPGQRGPPGLPGYPGGRIGRKGS
PGPQGRDGQNGFPGLAGLKGHKGEQGECKCFSGDEASRGPAGEPGPVGFPGSPGESGSKG
EKGDRGVPGVPGAPGIEGLPGLNGLPGHAGEKGDTVFATEKGAKGALGDAGLPGTEGFEG
PPGKDGSYGIPGFPGPPGDAAKGLIGDPGFPGPPGREGVRGETGRPGLGFQGPKGTRGAP
GPPGPDGPPGISGLPGLPGDCFKESADEQTGKPNSGCILTPPPAPAGAPGPPGLPGFKGF
RGLKGQPGLPGPDGIKGLKGIGGDPGPDSLPGPPGFPGRRGDRGTPGLPGLPGLPGLEGN
PGFKGFDGQQGGPGDVLGAPSGLRGDVGFPGFPGLKGKQGEPGLPGLQGIDGISGVPGQK
GIQGDPGISGAPGLPGLSGNGGFPGMPGKQGTPGTVGSSGLPGSPGPRGDEGMSGQPGQS
LIKGQPGDAGNVGFIGIRGRPGDPGFPGLTGMDGHPGVKGAKGSPGMAGFEGMKGEKGRP
SWSGPKGQSGNSGVPGVRGLPGEPGTKGNRGETGPPGPKPDIMPILMEMKGEKGDFGNSG
FKGFEGFKGSKGMPGHPGQPGQPGLPGMPNYEQGEKGEIGVFGHPGFPGVPGQVGPPGIR
GFPGFTGPRGSKGMPGIFGLPGERGSFGDTGQIGDTIDMPGERGFKGLKGNSGFPGLRGR
PGDKGFQGNAGFSGIEGMKGETGQPGERGNIGLPGLLGLPGAQGDPGFPGIPGGQGSSGI
PGLPGQQGFPGFRGISGLEGLTGTKGQQGTSGTDSFGASGVKGPIGEKGNQGEQSNVVGL
PGNTGAKGVKGEPGLPGFMGLRGLDGVRGVPGVSNYSGSPGDVGSSGPLGLPGYPGPQGR
PGAPSRPGVKGESGPQGLEGKVGDKGIPGDRGPQGFTGIHGFPGGKGGMGDQGNEGGFGL
PGFPGDRGPKGPKGNRGPQGLQGEPGSTGLAAEPLRMEVEPGPIGITGIIGPEGSRGDMG
PHGFVGDKGAQGQPGRQGVPGIAGRSAVPGARGDMGIIGQRGPLGFKGNPGVPGAGGLPG
MPGRSVNIGYLLVKHSQTDQEPMCPVGMAKLWSGYSLLYLEGQEKAHNQDLGLAGSCLQR
FSTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPLVEEEIKPYISRCTVCEAPAVAI
AVHSQDASIPFCPDGWRSLWIGYSFLMHTAAGDEGGGQSLSSPGSCLEDFRATPFIECNG
GRGTCHYFANKYSFWLTTIDKTFQSSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagtggagggcttacacaatgccataggaaccatcagcaatggaagaacagt
ttgtcatggattttcctggcacttatgctagcagggttgctctccaagactgttgatgct
ggtggcaaatcatacacaggaccttgcggtggacgagattgcagtgaaggatgtcagtgt
tacccagagaaaggaagccgtggacaaccaggaccacttggtaatcaaggcgtctcaggg
ccaccaggacttattggaatagagggattaccaggtcgtaaaggagacaaaggtgaaaga
ggtcatccaggggtcaccggaccccttggagataagggtcaaagtggtgtcacaggattt
cctggagcaaatggtgtacctggtcatgttggacaaggtggtccaagaggaaagccagga
ttggatggttgcaatggaacaacgggagatgctggcgagactgggccaagcggtccaagt
ggttctgcaggctattctggtgaacaaggtttcaagggtcagaaaggtgaacctttttat
atatcagcggaccttaaaaataaaattaggggggatcctggtgaactaggaattattgga
gttcccggtcccagaggatctcctggagttatgggattcattggcccaatgggtcaacct
ggatatcctggacctccaggaccacaaggaccacaaggaccacaaggcagtaaaggcctt
ggattttatggacagaagggagaacagggtgaacaaggcagccctggacccccaggcctt
ccatgccagataacaggtgagccaggagatataggacccacaagtgcaccatgccatgaa
gagttggtcgagccatctgatatatccttaatagattatctgggagaaaccggtgagaaa
ggggaaaaaggaaatcctggattaaaaggacaaagggctttctacggagaaaagggagaa
gaaggtgtaatgggtttccccggagcaaggggtttttctggcagcgatggacagcccggt
gaccctggaaatgatggactgcctggaataagtggttttccagggacacctggctttaga
ggaataaagggagaacgtggtggaataggtgctccaggacctattacctatgctacacat
ccagaaacgcaaaaaggatcaaaaggagatgttggcttccctggaaatgctgggccagat
ggcgaaagaggcgacataggagatactggacttccaggtttaatgggaaggccaagtcca
ttccctggacaaccaggctatccaggcctaaaaggtgaaagaggtcacaaaggatatcaa
ggggttcctggttttcctgactttcaacctggaattgatggagaacctggacaacctgga
caacgaggacctcctggattacccggatatcctggaggacgcattggacgcaaaggttcg
ccaggacctcaggggcgagatggtcaaaatggatttcctggcctagctggcttaaaagga
cacaaaggggaacaaggtgaatgtaaatgcttttctggtgatgaagcttcaagagggcct
gctggagagcctggacctgtaggatttccaggctcaccgggtgaatctggtagtaaagga
gaaaagggagatagaggagttcctggtgtgcccggagcaccaggtatagagggacttcca
ggcctcaatggtcttcctgggcatgctggagagaagggagacacagtgtttgctacagag
aaaggtgcaaagggtgctctgggagatgctggtttacctggcactgaaggatttgaagga
cctccaggaaaagatggatcctatggaattcctggcttcccaggtcctcctggtgatgct
gcgaaaggactaattggcgaccctggatttccaggacctccaggtcgtgaaggagtgaga
ggtgagactggccgaccaggtttagggtttcaaggccctaaaggcacacgtggagcccct
gggccaccaggaccagatggacctcctggaatttcaggactgccaggtttaccaggtgat
tgctttaaagagtctgcagatgaacaaacaggtaagcctaatagtggatgtattttaact
ccaccacctgcaccagcaggagccccaggaccaccaggattgccaggattcaaaggcttc
agaggcctgaaaggccagccagggttaccgggtccagatggcatcaaaggtcttaaagga
atcggaggtgatcctggacctgacagcttgccagggccaccaggatttccagggagaaga
ggagaccgtggtactcctggattaccaggtttgcctggtctacctggcctagagggtaat
ccaggttttaaaggatttgatggtcagcaaggtggcccaggtgatgttttgggtgctcct
tcaggacttcggggagatgttggatttcctggtttcccaggtctaaaaggcaagcaaggt
gaaccaggtttaccaggactgcaaggcatcgatggtatatctggagttccaggacaaaaa
ggcattcaaggtgatcctggaatttcgggtgctccaggcttgccaggactatcaggtaat
ggtggatttccaggaatgccaggaaaacaaggaaccccaggaacagtcggatcgtctgga
cttcctggatctcctggaccaagaggagatgaaggtatgagtggtcagcctggacaatcc
ttgataaaagggcaaccaggagatgcaggaaatgtaggatttattggtataaggggaaga
ccaggagatccaggttttcctggtttgaccgggatggacggacaccctggtgtgaaagga
gcaaagggatcacctggcatggcaggatttgaaggtatgaagggagagaaaggaagacct
tcatggagtggacctaaggggcaatctggcaattctggtgtaccaggagttagagggctt
ccaggagaaccgggcacaaaaggcaatcgcggagaaactggcccaccaggacctaaacct
gacataatgccaatattaatggaaatgaagggagagaaaggagattttggtaattcagga
tttaaaggatttgaagggtttaaaggatctaaaggtatgccaggtcatccaggacaacct
ggacagcccggtttacctggaatgcccaactatgagcaaggtgaaaaaggagaaattgga
gtatttgggcaccctggatttccaggagttccaggccaggttgggccaccaggcattcgt
ggatttccaggatttactggtcccagaggttcgaagggaatgcctggtatttttggcctt
ccaggtgaaagaggtagttttggagatacaggacaaattggagacaccatagacatgcct
ggagagagaggattcaagggtctgaaaggaaacagtgggtttccaggactcagaggaaga
cctggagacaagggattccaaggaaatgcagggttttcaggcattgaaggaatgaaagga
gaaacaggacaaccaggagaaaggggcaacataggtttaccaggtcttctgggtctacct
ggagcacagggtgatcctggattccctggcattccgggtggacaaggaagtagtggcatt
ccagggttgcctggtcagcaaggctttcctggattcagaggaatttctggactcgaaggt
ctgacagggactaagggacaacaaggcacatcaggcacagattcatttggtgcatcaggt
gtaaaaggccccataggtgagaaaggcaaccagggtgagcagagtaatgttgttggatta
cctggaaatactggtgcaaaaggagtcaaaggagagccaggtttgcctggttttatgggt
ttacgtggattagatggtgtccgtggcgttcctggtgtttctaactactcaggaagccca
ggagatgttgggtcttcgggtcctctagggctaccaggctacccaggtccccaaggaaga
ccaggtgcaccctcacgacccggagttaaaggagagtcaggaccccaaggtttagaagga
aaagtgggtgataaaggaattccaggtgatagaggaccacaaggatttactggtatccat
ggctttcctggagggaaaggtgggatgggtgaccaaggtaatgaaggtggatttggatta
cctggattcccaggagacagaggtcctaaaggaccaaagggtaaccgggggccacagggt
ctgcagggtgaacctggatcaacagggttagcagctgaaccattacgtatggaagtggaa
cctggtcctattggtataacaggaattataggtcctgaaggcagcaggggagacatggga
ccccatggttttgttggtgataaaggtgcacagggtcaaccgggtaggcaaggtgttcca
ggtatagctggaaggtctgcagtacctggcgctcgtggagacatggggattataggacaa
aggggtcctctaggatttaaaggaaaccctggggtaccaggtgctggtgggttgccaggc
atgccaggaagaagtgtgaacataggctatctccttgtaaaacacagccagactgaccaa
gagccaatgtgtcctgttggcatggctaaactgtggagcggatacagtttgttgtatttg
gaaggacaggagaaagcacacaatcaagacttaggtctggctggatcctgtctccagcgc
ttcagtacaatgcctttcctatactgcaacccgggtgatttgtgctattatgccagtcgc
aatgataaatcttactggctatcaaccacagctcctcttccaatgatgcctttagtagaa
gaagaaattaaaccctatataagtcgctgtactgtctgtgaagctcctgcagttgcaatt
gctgtccatagtcaagatgcttccatcccattctgtcccgatggttggagaagcttgtgg
attggatactcattccttatgcacacagccgcaggtgatgagggaggtggacagtctctt
tcatctcctggcagctgcctagaagacttcagagcaaccccattcattgagtgcaacggt
ggtcgtggaacttgccactattttgctaacaaatacagcttctggcttacaactattgac
aagacattccagagctctccgtcatcagatacactgaaagctggcctgattcgaactcat
atcagccgctgccaagtttgcatgaaaaatctgtaa
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integrated database retrieval system
